prot_E-fasciculatus_F_contig1332.2496.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1332.2496.1
Unique Nameprot_E-fasciculatus_F_contig1332.2496.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length403
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1332.2496.1 vs. uniprot
Match: A0A6H5KKG1_9PHAE (VPS13_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKG1_9PHAE)

HSP 1 Score: 600 bits (1548), Expect = 5.540e-192
Identity = 331/425 (77.88%), Postives = 346/425 (81.41%), Query Frame = 0 
Query:    1 MKELIDRAVAHVALNARRNTHAESPVQGAAPSSVVEGEAPVASSWWPSFWRGTAPEDIDEGLPEGGAEMTSFEMNHGALGTSSPA----------------------PFESREYHTKFVVASASVGSVSLRLLEHQEQPAHAETKEKGEEEECNSPEDEEPLSISVPVHGLGTVSVFSTPVSARKQALRPPVVFVVAEVKGLALDAHVLPSDNELSTDVKVDVSSVVVRHARLFEHAATPAADKPPDQADKRLDYLEPVVSWGAAVIPDAPPTAQEAHLSSGGTDAFADPRTAAIVQRCLIELAQGSPELGATDGESIDGDSNSSRQSARAPAPDVPXXXPAPWAPAFPSATPQPVRKDSSALQYRLLKRKGGGTSTDGSPRGGGGAVTGTVSTLACHDMAMGALRVQLAEVLLEKLLRFSGVVG 403
            MKELIDRAVAHVALNARRNTHAESP+QGA PS+V EGEA VASSWWPSFWRGTAPEDIDEGLPEGG E TS EMNHG LGTSSPA                      PFESREYHTKFVVASASVGSVSLRL EHQEQPAHAE  E+GEEEECNSPEDEEPLSISVPVHGLGTVSVFSTPVSAR +  R                  V+ SDNELSTDVKVDVSS+VVRHARLFE AATPAADKPPDQADK LDYLEPVVSWGAAV+PDAPPT+QE  L SG TD  AD RTAAIVQRCLIELAQGSPELGA DGESIDG+SNSSRQSARAP     XXX  PWA  FPSA P+PV KDSSALQYRLLKRKGGGTSTDGSP  GG A+TGTVSTLACHD+A+GALRVQLAE+LLEKLL+F GVVG
Sbjct:  556 MKELIDRAVAHVALNARRNTHAESPIQGAPPSAVAEGEAQVASSWWPSFWRGTAPEDIDEGLPEGGTETTSTEMNHGTLGTSSPAEHFVHVLLLLFVFAAGGLRNPAPFESREYHTKFVVASASVGSVSLRLFEHQEQPAHAEPTERGEEEECNSPEDEEPLSISVPVHGLGTVSVFSTPVSARWEDWRV-----------------VVASDNELSTDVKVDVSSIVVRHARLFEDAATPAADKPPDQADKGLDYLEPVVSWGAAVMPDAPPTSQEGDLGSGRTDGLADLRTAAIVQRCLIELAQGSPELGAADGESIDGESNSSRQSARAPXXXXXXXXXXPWAQVFPSAAPRPVPKDSSALQYRLLKRKGGGTSTDGSPDSGGVAITGTVSTLACHDLAVGALRVQLAELLLEKLLKFFGVVG 963
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1332.2496.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KKG1_9PHAE5.540e-19277.88VPS13_C domain-containing protein n=2 Tax=Ectocarp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1332contigE-fasciculatus_F_contig1332:13999..16249 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1332.2496.1mRNA_E-fasciculatus_F_contig1332.2496.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1332 13997..16249 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1332.2496.1 ID=prot_E-fasciculatus_F_contig1332.2496.1|Name=mRNA_E-fasciculatus_F_contig1332.2496.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=403bp
MKELIDRAVAHVALNARRNTHAESPVQGAAPSSVVEGEAPVASSWWPSFW
RGTAPEDIDEGLPEGGAEMTSFEMNHGALGTSSPAPFESREYHTKFVVAS
ASVGSVSLRLLEHQEQPAHAETKEKGEEEECNSPEDEEPLSISVPVHGLG
TVSVFSTPVSARKQALRPPVVFVVAEVKGLALDAHVLPSDNELSTDVKVD
VSSVVVRHARLFEHAATPAADKPPDQADKRLDYLEPVVSWGAAVIPDAPP
TAQEAHLSSGGTDAFADPRTAAIVQRCLIELAQGSPELGATDGESIDGDS
NSSRQSARAPAPDVPAPSPAPWAPAFPSATPQPVRKDSSALQYRLLKRKG
GGTSTDGSPRGGGGAVTGTVSTLACHDMAMGALRVQLAEVLLEKLLRFSG
VVG
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