mRNA_E-fasciculatus_F_contig1332.2492.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1332.2492.1 vs. uniprot
Match: D8LBD0_ECTSI (WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBD0_ECTSI) HSP 1 Score: 205 bits (521), Expect = 1.720e-58 Identity = 245/422 (58.06%), Postives = 251/422 (59.48%), Query Frame = 1
Query: 244 TPQADQFSNRPPSGFGAPPTHQXXXXXXXXXXXXGFGATPPSTASRNGXXXXXXXXXXXPPQVGGGGAPPQSPQFPPQQNQGFSTQQQLGGQQPSQANQQGFIRVAAPGPAGGPAGAPQFLPPQXXXXXXXXXXXXXXXXXXXXXXXXXXXAPXXXPVQPQPGHQLMTAPGQYGGGAQYGAPPAAATSSTPKPQALGVSSSSSTPAPAAASPGAPRFDAYGRPIPQSQQQSPXXXXXXXXXXXXXXXXXXXXXXXPQLDPXXXXXXXXXXXQQQQHKXXXXXXXXXXXXXXXXXXXXXXXXXQQQQPPQXXAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTPAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPGWQAVPDKSSGDTYYWNKSTGQTTWDFPTK 1509
TPQADQFSNRPPSGFGAPPTHQXXXXXXXXXXXXGFGATPPSTASRNG XXXXXXXXX PPQVGGGGAPPQSPQFP QQNQGFSTQQQ+GGQQPSQANQQGF+RVAAPGPAG XXXXXXXXXXXXXXXXXXXXXXXXXXX XXX QPGHQLMTAPGQY GGAQYGA PAAATSSTPKPQ LGV+ + PAP +G Q PPQ X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PPGWQAVPDKSSGDTYYWNK+TGQTTWDFPTK
Sbjct: 29 TPQADQFSNRPPSGFGAPPTHQXXXXXXXXXXXXGFGATPPSTASRNGPXXXXXXXXXAPPQVGGGGAPPQSPQFPTQQNQGFSTQQQVGGQQPSQANQQGFVRVAAPGPAGXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPGHQLMTAPGQYTGGAQYGAQPAAATSSTPKPQVLGVTQA---PAP------------FG-----------------------------------------------------------------------------------QYPPQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------------------------PPGWQAVPDKSSGDTYYWNKATGQTTWDFPTK 307
BLAST of mRNA_E-fasciculatus_F_contig1332.2492.1 vs. uniprot
Match: A0A6H5KKE1_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKE1_9PHAE) HSP 1 Score: 214 bits (545), Expect = 3.060e-57 Identity = 355/518 (68.53%), Postives = 358/518 (69.11%), Query Frame = 1
Query: 1 GRSQGAPPTRPSGQQSRFGPPXXXXXXXXXXXXXXXXXQYQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPQADQFSNRPPSGFGAPPTHQXXXXXXXXXXXXGFGATPPSTASRNGXXXXXXXXXXXPPQVGGGGAPPQSPQFPPQQNQGFSTQQQLGGQQPSQANQQGFIRVAAPGPAGGPAGAPQFLPPQXXXXXXXXXXXXXXXXXXXXXXXXXXXAPXXXPVQPQPGHQLMTAPGQYGGGAQYGAPPAAATSSTPKPQALGVSSSSSTPAPAAASPGAPRFDAYGRPIPQSQQQSPXXXXXXXXXXXXXXXXXXXXXXXPQLDPXXXXXXXXXXXQQQQHKXXXXXXXXXXXXXXXXXXXXXXXXXQQQQPPQXXAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTPAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------PPGWQAVPDKSSGDTYYWNKSTGQTTWDFPTK 1509
GRSQGAPPTR SGQQSRFGP X XXXXXXXXXXX XXXXXXX XXXXXXXXXXXXT QADQFSNRPPSGFGAPPTHQXXXXXXXXXXXX QSPQFP QQNQGFSTQQQ+GGQQPSQANQQGF+RVAAPGPAG XXXXXXXXXXXXXXXXXXXXXXXXXXX XXX QPGHQLMTAPGQY GGAQYGA PAAATSSTPKPQ LGVSSS TPAPAAAS GAP FDAYGRPIPQSQQQS XXXXXXXXXXXXXXXXXXXXXXXPQLDPXXXXXXXXXXX Q XXXXXXXX QQ PQXX XXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXX T AP XXXXXXXXXXXXXXXXXXX PPGWQAVPDKSSGDTYYWNK+TGQTTWDFPTK
Sbjct: 421 GRSQGAPPTRSSGQQSRFGPXXTGPQQXXXXXXXXXXXXXX-XXXXXXXPMPPHGQPQDGGRPNTQMAPXXXXXXXXXXXXTSQADQFSNRPPSGFGAPPTHQXXXXXXXXXXXXXXXXXXXXXXX-------------------------QSPQFPTQQNQGFSTQQQIGGQQPSQANQQGFVRVAAPGPAGXXXXXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPGHQLMTAPGQYAGGAQYGAQPAAATSSTPKPQVLGVSSS--TPAPAAASLGAPHFDAYGRPIPQSQQQSTXXXXXXXXXXXXXXXXXXXXXXXPQLDPXXXXXXXXXXXXXXQKPTQLXXXXXXXX----------------QQAPQXXQQQXXXXXXXXXXXXQQAATQXXXXXXXXXXXXXXXXXXXXXVTQAPATFAQYPPQSQAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPGWQAVPDKSSGDTYYWNKATGQTTWDFPTK 891 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1332.2492.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1332.2492.1 >prot_E-fasciculatus_F_contig1332.2492.1 ID=prot_E-fasciculatus_F_contig1332.2492.1|Name=mRNA_E-fasciculatus_F_contig1332.2492.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=504bp GRSQGAPPTRPSGQQSRFGPPPTDPQQQQQQQQQQQQQQYQPQQASQQQRback to top mRNA from alignment at E-fasciculatus_F_contig1332:3..2108+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1332.2492.1 ID=mRNA_E-fasciculatus_F_contig1332.2492.1|Name=mRNA_E-fasciculatus_F_contig1332.2492.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2106bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1332:3..2108+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1332:3..2108+ >mRNA_E-fasciculatus_F_contig1332.2492.1 ID=mRNA_E-fasciculatus_F_contig1332.2492.1|Name=mRNA_E-fasciculatus_F_contig1332.2492.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3024bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1332:3..2108+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |