mRNA_E-fasciculatus_F_contig13291.2478.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig13291.2478.1
Unique NamemRNA_E-fasciculatus_F_contig13291.2478.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig13291.2478.1 vs. uniprot
Match: A0A6H5JLR0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLR0_9PHAE)

HSP 1 Score: 395 bits (1016), Expect = 6.070e-134
Identity = 190/208 (91.35%), Postives = 192/208 (92.31%), Query Frame = 1
Query:    1 EDGRFPFFATRQINRRGVVVVRGVVPADTALRWRDSLLEYLEMNGLAGGPPGAKDVFWSQAQAQAREHVGVRQVLAALNRLWKPDAHSPADLTKSLSFCDRAFVGNPTCSSLKGRESAVMAGGTGGSQRWLNPHLHQAYGDIFQGRWEDWDPFKAGPRMRAAENAACSWGEDDTPSPPGSIGGGAPPQPFRPFQGFLSFGRWGEVGNV 624
            EDGRFPFFATRQINRRGVVVVRGVVPADTALRWRDSLLEYLE NGLAGGPPGAKDVFWSQAQAQAREH GVRQVLAALNRLW+PDAHSPADLTKSLSFCDRAFVGNPTCSSLKGRESAVMAGGTGGSQRWLNPHLHQAYGDIFQGRWEDWDPFKAGPRMRAAEN+ACSWGEDDTPSPPGSIG GAPPQPFR             VGNV
Sbjct:  136 EDGRFPFFATRQINRRGVVVVRGVVPADTALRWRDSLLEYLETNGLAGGPPGAKDVFWSQAQAQAREHDGVRQVLAALNRLWRPDAHSPADLTKSLSFCDRAFVGNPTCSSLKGRESAVMAGGTGGSQRWLNPHLHQAYGDIFQGRWEDWDPFKAGPRMRAAENSACSWGEDDTPSPPGSIGIGAPPQPFRXXXXXXXXXXXXXVGNV 343          
BLAST of mRNA_E-fasciculatus_F_contig13291.2478.1 vs. uniprot
Match: D7G0N4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0N4_ECTSI)

HSP 1 Score: 291 bits (746), Expect = 2.290e-95
Identity = 138/156 (88.46%), Postives = 140/156 (89.74%), Query Frame = 1
Query:  157 AKDVFWSQAQAQAREHVGVRQVLAALNRLWKPDAHSPADLTKSLSFCDRAFVGNPTCSSLKGRESAVMAGGTGGSQRWLNPHLHQAYGDIFQGRWEDWDPFKAGPRMRAAENAACSWGEDDTPSPPGSIGGGAPPQPFRPFQGFLSFGRWGEVGNV 624
            AKDVFWSQAQAQAREH G+RQVLAALNRLW+PDAHSPADLTKSLSFCDRAFVGNPTCSSLKGRES VMAGGTGGSQRWLNPHLHQAY DIFQGRWEDWDPFKAGPRMRAAENAACSWGEDDTPSPPGSIG GAPPQPFR            EVGNV
Sbjct:   15 AKDVFWSQAQAQAREHDGIRQVLAALNRLWRPDAHSPADLTKSLSFCDRAFVGNPTCSSLKGRESVVMAGGTGGSQRWLNPHLHQAYDDIFQGRWEDWDPFKAGPRMRAAENAACSWGEDDTPSPPGSIGVGAPPQPFRXXXXXXXXXXXXEVGNV 170          
BLAST of mRNA_E-fasciculatus_F_contig13291.2478.1 vs. uniprot
Match: A0A2T9XWP4_9FUNG (Uncharacterized protein n=2 Tax=Smittium megazygosporum TaxID=133381 RepID=A0A2T9XWP4_9FUNG)

HSP 1 Score: 114 bits (285), Expect = 2.590e-26
Identity = 74/205 (36.10%), Postives = 110/205 (53.66%), Query Frame = 1
Query:    1 EDGRFPFFATRQINRRGVVVVRGVVPADTALRWRDSLLEYLEMNGLAGGPPGAKD-------VFWSQAQAQAREHVGVRQVLAALNRLWKPDAHSPADLTKSLSFCDRAFVGNPTCSSLKGRESAVMAGGTGGSQRWLNPHLHQAYGDIFQGRWEDWDPFKAGPRMRAAENAACSWGEDDTPSPPGSIGGGAPPQPFRPFQGFLS 594
            ++G FP     ++ +RG VVV+GVVP DTA+ ++  +L+Y+  +G  G  PG  +       ++WS+AQ +AR H    Q  AALNRLW  D ++  DL  +L++CDR  +  P  SS K RE   + GG+  ++RW +    + Y DI  G+WE+ D F A  R+ A           D P       GG   + FR FQG+L+
Sbjct:   73 KNGEFPDEIKHELMKRGCVVVKGVVPVDTAVGYKQQVLDYITAHG--GNIPGFPEHDQQVWELYWSKAQVEARSHPNFIQTAAALNRLWHADENAKVDLGTNLTYCDRLRIRKPGDSSFKLREH--LDGGS--TERWEDECYRKCYSDILNGQWENHDAFDATHRLDAKMQMY------DAP-------GGC--EMFRTFQGWLA 256          
BLAST of mRNA_E-fasciculatus_F_contig13291.2478.1 vs. uniprot
Match: A0A835YIE9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIE9_9STRA)

HSP 1 Score: 112 bits (279), Expect = 9.200e-26
Identity = 72/207 (34.78%), Postives = 97/207 (46.86%), Query Frame = 1
Query:   73 VPADTALRWRDSLLEYLEMNGLAGGPPGAKDVFWSQAQAQAREHVGVRQVLAALNRLWKPDAHS---PA-DLTKSLSFCDRAFVGNPTCS---SLKGRESAVM---------------AGGTGGSQRWLNPHLHQAYGDIFQGRWEDWDPFKAGPRMRAAENAACSWGEDDTPSPPGSIGGGAPPQPFRPFQGFLSFGRW-GEVGNV 624
            VP  TALRWRDS+++YL  NG    PP     +WS  Q  ARE+  +  VL AL  LW  +  +   PA DL  +L++CDR  +G P CS     + R                    A G+   + WL+P     Y  + +GRWE+WDPF AGPR    +  + SW +                  FRP+QGFLS   W  + GN+
Sbjct:   10 VPEATALRWRDSVIDYLLGNGQWVRPPVEHPRYWSHPQLMARENPRIATVLTALTALWHTEGSTVGVPAVDLQTNLTYCDRLCIGKP-CSPHGDFRSRGGGXXXXXXXXXXXXXXXXAAMGSPAREHWLHPRFTGVYRPVIEGRWEEWDPFHAGPRAALDQALSGSWTKHGA---------------FRPWQGFLSLAPWLQQEGNL 200          
BLAST of mRNA_E-fasciculatus_F_contig13291.2478.1 vs. uniprot
Match: A0A8H7S4U2_9FUNG (Uncharacterized protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7S4U2_9FUNG)

HSP 1 Score: 102 bits (254), Expect = 6.290e-22
Identity = 66/206 (32.04%), Postives = 99/206 (48.06%), Query Frame = 1
Query:    7 GRFPFFATRQINRRGVVVVRGVVPADTALRWRDSLLEYLEMN-GLAG----GPPGAKDVFWSQAQAQAREHVGVRQVLAALNRLWKPDAHSPADLTKSLSFCDRAFVGNPTCSSLKGRESAVMAGGT-GGS-QRWLNPHLHQAYGDIFQGRWEDWDPFKAGPRMRAAENAACSWGEDDTPSPPGSIGGGAPPQPFRPFQGFLSFGR 603
            GR P     ++ +RG +V+R +V    A  ++ S+ EY+  + G+AG     P    +V+WSQAQ QAR H        ALN +W  D+ +P +L  +L +CDR  +  P      G     +AG   GGS +RW +P   + Y  I QG+WE++DP+    R+ A           D    PG          FR FQG+L+  +
Sbjct:   84 GRLPDKIISEVKKRGTIVIRNIVDRHLAAEYKSSIQEYIHRHPGIAGFPEDNPQKVWEVYWSQAQIQARSHPNFTATTVALNNIWHGDSKAPINLNNNLVYCDRLRIRQP------GDGKFNLAGHIDGGSLERWEDPEYRRCYTKILQGKWEEYDPYDVTHRIEA---------NMDLYDAPGGC------SMFRIFQGWLAISK 268          
BLAST of mRNA_E-fasciculatus_F_contig13291.2478.1 vs. uniprot
Match: A0A8H4UW23_9HYPO (Uncharacterized protein (Fragment) n=1 Tax=Fusarium sp. NRRL 66182 TaxID=2692428 RepID=A0A8H4UW23_9HYPO)

HSP 1 Score: 96.3 bits (238), Expect = 6.050e-21
Identity = 64/204 (31.37%), Postives = 94/204 (46.08%), Query Frame = 1
Query:   34 QINRRGVVVVRGVVPADTALRWRDSLLEYL-----EMNGLAGGPPGAKDVFWSQAQAQAREHVGVRQVLAALNRLW-KPDAHSPADLTKSLSFCDRAFVGNPTCSSLKGRESAVMAGGTGGS-QRWLNPHLHQAYGDIFQGRWEDWDPFKAGPRMRAAEN-----AACSWGEDDTPSPPGSIGGGAPPQPFRPFQGFLSFGRWG 609
            +I  RG VV+RGVVP DTAL ++    EY+      +N      P   +++W+ +QAQAR H G+      L +LW   +  S    T  + + DR  + NP  +       A+     GGS +RW +P   + Y  I +G+WE++DPF A  R+ A ++      ACS                     FR FQG+LS    G
Sbjct:   22 EIRHRGSVVIRGVVPKDTALEYKQKAREYIAANKDRVNAFPKDDPAVYELYWTPSQAQARAHPGMINTQKFLTKLWYSSNPQSKISTTHPIMYADRFRIRNPGDAKF-----ALGPHSDGGSLERWEDPEYRRCYSKILEGKWEEYDPFDANHRISAHQDLYNGAGACSM--------------------FRFFQGWLSMSSTG 200          
BLAST of mRNA_E-fasciculatus_F_contig13291.2478.1 vs. uniprot
Match: B6QDV4_TALMQ (DUF1479 domain protein n=1 Tax=Talaromyces marneffei (strain ATCC 18224 / CBS 334.59 / QM 7333) TaxID=441960 RepID=B6QDV4_TALMQ)

HSP 1 Score: 95.1 bits (235), Expect = 1.410e-19
Identity = 64/204 (31.37%), Postives = 95/204 (46.57%), Query Frame = 1
Query:   34 QINRRGVVVVRGVVPADTALRWRDSLLEYL-----EMNGLAGGPPGAKDVFWSQAQAQAREHVGVRQVLAALNRLW-KPDAHSPADLTKSLSFCDRAFVGNPTCSSLKGRESAVMAGGTGGS-QRWLNPHLHQAYGDIFQGRWEDWDPFKAGPRMRAAEN-----AACSWGEDDTPSPPGSIGGGAPPQPFRPFQGFLSFGRWG 609
            +I  RG VV+RGVVP +TAL ++    EY+      +N      P   +++W+ +Q  AR H G+      L++LW   +  S    T  L++ DR  + NP  +       A+     GGS +RW +P  H+ Y  I +GRWE++DPF A  R+ A ++      ACS                     FR FQG+LS    G
Sbjct:  109 EIRLRGAVVIRGVVPKETALDYKQKAREYIAANKDRVNAFPKDDPAVYELYWTPSQVHARAHPGIIDTQKFLSKLWHSSNPLSQISNTHPLTYADRFRIRNPGDAKF-----ALGPHSDGGSLERWEDPEYHRCYSKILEGRWEEYDPFDADHRISAHQDLYNGAGACSM--------------------FRFFQGWLSMSSTG 287          
BLAST of mRNA_E-fasciculatus_F_contig13291.2478.1 vs. uniprot
Match: A0A364KXL8_9EURO (Uncharacterized protein n=1 Tax=Talaromyces amestolkiae TaxID=1196081 RepID=A0A364KXL8_9EURO)

HSP 1 Score: 95.9 bits (237), Expect = 1.570e-19
Identity = 64/204 (31.37%), Postives = 95/204 (46.57%), Query Frame = 1
Query:   34 QINRRGVVVVRGVVPADTALRWRDSLLEYL-----EMNGLAGGPPGAKDVFWSQAQAQAREHVGVRQVLAALNRLW-KPDAHSPADLTKSLSFCDRAFVGNPTCSSLKGRESAVMAGGTGGS-QRWLNPHLHQAYGDIFQGRWEDWDPFKAGPRMRAAEN-----AACSWGEDDTPSPPGSIGGGAPPQPFRPFQGFLSFGRWG 609
            +I  RG VV+RGVVP +TAL ++    EY+      +N      P   +++W+ +QAQAR H G+      L +LW   +  S    T  + + DR  + NP  +       A+     GGS +RW +P   + Y  IF+G+WE++DPF A  R+ A ++      ACS                     FR FQG+LS    G
Sbjct:  109 EIRHRGSVVIRGVVPKETALEYKQKAREYIAANKDRVNAFPKDDPAVYELYWTPSQAQARAHPGMISTQKFLTKLWYSSNPLSKISTTHPIMYADRFRIRNPGDAKF-----ALGPHSDGGSLERWEDPEYRRCYSKIFEGKWEEYDPFDANHRISAHQDLYNGAGACSM--------------------FRFFQGWLSMSSTG 287          
BLAST of mRNA_E-fasciculatus_F_contig13291.2478.1 vs. uniprot
Match: A0A6A5XLQ1_9PLEO (DUF1479-domain-containing protein n=1 Tax=Aaosphaeria arxii CBS 175.79 TaxID=1450172 RepID=A0A6A5XLQ1_9PLEO)

HSP 1 Score: 95.5 bits (236), Expect = 2.260e-19
Identity = 64/211 (30.33%), Postives = 95/211 (45.02%), Query Frame = 1
Query:    4 DGRFPFFATRQINRRGVVVVRGVVPADTALRWRDSLLEYLEMNGLAGGPPG----AKDVFWSQAQAQAREHVGVRQVLAALNRLWKPDAHSPADLTKSLSFCDRAFVGNPTCSSLKGRESAVMAGGTGGSQRWLNPHLHQAYGDIFQGRWEDWDPFKAGPRMRAAENAACSWGEDDTPSPPGSIGGGAPPQPFRPFQGFLSFGRWGEVGNV 624
            +GR P      + + G ++VRG+VP  TA  W+ S+  Y+  N    G P       ++FWS+AQ +AR H  +     ALN  WK DA     L++ +S+CDR  +  P   S        + GG+   +RW +    + Y +I +G WE  D F+ GPR+ A           D  + PG          FR +QG+LS    G     
Sbjct:  111 NGRLPPGIELALKKCGTIIVRGLVPEQTAWDWKQSVRRYVAENPSTKGFPKDDIQVYELFWSKAQLEARAHSNMLMAQKALNAAWKKDAGDRVVLSEQISYCDRLRMRTPGDKSFN--LGPHLDGGS--LERWEDLAYRKCYTEILRGDWEQHDAFRVGPRLDACV---------DMYNGPGGCSA------FRSYQGWLSLSECGPSNGT 302          
BLAST of mRNA_E-fasciculatus_F_contig13291.2478.1 vs. uniprot
Match: A0A367IK73_RHIST (Uncharacterized protein (Fragment) n=1 Tax=Rhizopus stolonifer TaxID=4846 RepID=A0A367IK73_RHIST)

HSP 1 Score: 93.6 bits (231), Expect = 2.790e-19
Identity = 55/172 (31.98%), Postives = 79/172 (45.93%), Query Frame = 1
Query:    7 GRFPFFATRQINRRGVVVVRGVVPADTALRWRDSLLEYLE-------------MNGLAGGPPGAKDVFWSQAQAQAREHVGVRQVLAALNRLWKPDAHSPADLTKSLSFCDRAFVGNPTCSSLKGRESAVMAGGTGGSQRWLNPHLHQAYGDIFQGRWEDWDPFKAGPRMRA 483
            GRFP     QI RRG VV+R V+P   A  ++  +  Y+              + G     P   +V+W+++Q  AR H G      ALN+LW  D  +  D +K++++CDR  +  P        E+ V     G  +RW +P   Q Y  I  G WE  DPF A  R+ A
Sbjct:   83 GRFPQDIAAQIQRRGCVVIRQVIPEQEACEYKQQIQRYVNKYQIKRVNCVPGHIEGYPKHKPQVFEVYWTKSQVTARSHAGFELATMALNQLWHADEDTVIDWSKNMAYCDRLQIHKPG-DVFFDLEAHVD---NGSLERWQDPEYRQCYTHILNGEWERHDPFDATHRVEA 250          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13291.2478.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JLR0_9PHAE6.070e-13491.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0N4_ECTSI2.290e-9588.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2T9XWP4_9FUNG2.590e-2636.10Uncharacterized protein n=2 Tax=Smittium megazygos... [more]
A0A835YIE9_9STRA9.200e-2634.78Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8H7S4U2_9FUNG6.290e-2232.04Uncharacterized protein n=1 Tax=Mucor circinatus T... [more]
A0A8H4UW23_9HYPO6.050e-2131.37Uncharacterized protein (Fragment) n=1 Tax=Fusariu... [more]
B6QDV4_TALMQ1.410e-1931.37DUF1479 domain protein n=1 Tax=Talaromyces marneff... [more]
A0A364KXL8_9EURO1.570e-1931.37Uncharacterized protein n=1 Tax=Talaromyces amesto... [more]
A0A6A5XLQ1_9PLEO2.260e-1930.33DUF1479-domain-containing protein n=1 Tax=Aaosphae... [more]
A0A367IK73_RHIST2.790e-1931.98Uncharacterized protein (Fragment) n=1 Tax=Rhizopu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13291contigE-fasciculatus_F_contig13291:70..3042 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score290.8
Seed ortholog evalue5e-76
Seed eggNOG ortholog2880.D7G0N4
EggNOG free text desc.Protein of unknown function (DUF1479)
EggNOG OGs2CK8J@1,2QWFN@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionIsopenicillin N synthase-like
Ec32 orthologEc-14_001650.1
Exons5
Model size624
Cds size624
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13291.2478.1prot_E-fasciculatus_F_contig13291.2478.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig13291 70..3042 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927831.656695-CDS-E-fasciculatus_F_contig13291:69..2821622927831.656695-CDS-E-fasciculatus_F_contig13291:69..282Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13291 70..282 -
1695995713.7017999-CDS-E-fasciculatus_F_contig13291:69..2821695995713.7017999-CDS-E-fasciculatus_F_contig13291:69..282Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13291 70..282 -
1622927831.6785567-CDS-E-fasciculatus_F_contig13291:748..8691622927831.6785567-CDS-E-fasciculatus_F_contig13291:748..869Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13291 749..869 -
1695995713.7124329-CDS-E-fasciculatus_F_contig13291:748..8691695995713.7124329-CDS-E-fasciculatus_F_contig13291:748..869Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13291 749..869 -
1622927831.6926587-CDS-E-fasciculatus_F_contig13291:1319..14531622927831.6926587-CDS-E-fasciculatus_F_contig13291:1319..1453Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13291 1320..1453 -
1695995713.7206678-CDS-E-fasciculatus_F_contig13291:1319..14531695995713.7206678-CDS-E-fasciculatus_F_contig13291:1319..1453Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13291 1320..1453 -
1622927831.7150536-CDS-E-fasciculatus_F_contig13291:1996..20381622927831.7150536-CDS-E-fasciculatus_F_contig13291:1996..2038Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13291 1997..2038 -
1695995713.7288413-CDS-E-fasciculatus_F_contig13291:1996..20381695995713.7288413-CDS-E-fasciculatus_F_contig13291:1996..2038Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13291 1997..2038 -
1622927831.7277136-CDS-E-fasciculatus_F_contig13291:2928..30421622927831.7277136-CDS-E-fasciculatus_F_contig13291:2928..3042Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13291 2929..3042 -
1695995713.738908-CDS-E-fasciculatus_F_contig13291:2928..30421695995713.738908-CDS-E-fasciculatus_F_contig13291:2928..3042Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13291 2929..3042 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig13291.2478.1

>prot_E-fasciculatus_F_contig13291.2478.1 ID=prot_E-fasciculatus_F_contig13291.2478.1|Name=mRNA_E-fasciculatus_F_contig13291.2478.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=208bp
EDGRFPFFATRQINRRGVVVVRGVVPADTALRWRDSLLEYLEMNGLAGGP
PGAKDVFWSQAQAQAREHVGVRQVLAALNRLWKPDAHSPADLTKSLSFCD
RAFVGNPTCSSLKGRESAVMAGGTGGSQRWLNPHLHQAYGDIFQGRWEDW
DPFKAGPRMRAAENAACSWGEDDTPSPPGSIGGGAPPQPFRPFQGFLSFG
RWGEVGNV
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mRNA from alignment at E-fasciculatus_F_contig13291:70..3042-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig13291.2478.1 ID=mRNA_E-fasciculatus_F_contig13291.2478.1|Name=mRNA_E-fasciculatus_F_contig13291.2478.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2973bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13291:70..3042- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GAGGACGGCCGGTTTCCGTTTTTCGCGACGCGTCAAATCAATCGGAGAGG AGTTGTGGTGGTACGTGGCGTCGTCCCCGCCGACACGGCGTTGCGGTGGC GAGATTCCTTGCTGGTGAGAGAAAGAAAGAGAGAGAGGCGAGCAGTCAGT CAGACAGGCAGGCAGACAGACAGAAAGACTATAATAGACAGAAATGCGGT GTGTCCGACAGATAGACATACAGCCTAGCAGGCAGTTTGTCCGACAGACG AGAGATGCAGACGCGGGGGGCTGGGGGGTAAAAGCGGTAGGTTGGGTAAT TTCAACGCTCGCCCCGAGCCTAGGGAAGAACGTGGGCGGTAGCGCACAAG TCCAGAGAAGGAGGAGGAGGAGGAGGAGGCAAAACCCTCTTGGTGCTGAG TACAGTCTGCGCGAAAGAACCCGGCATGGGTGTCAAGAACACGGAGCCAG CGTTTGACCTTGTGTGTTTAGGAATATACCGTTTGGTGTTATGGAAGTGT ATTTTTTTTTTTTTGTTGCATAAAGAAACCAAAATGTGGATTCTCAGTCC CTGGGGCTGATTTTTTTTTTTTTGTGTTTTTTGTGGAAGACATACGCATA CACCGGGAAAAGAAACATAACGGATGCTGACGTTCCGTGAATGCGTTGGG CATTGCTTAGGCCCGGTCTCGTTTTTCGCCGTCCGCCGTGATTGGCCTAG ATGTAGATGAGACCGGTCACCGGATGGCCTGCAGCTCACAGCCCAGGGAA CTGGCTTGACGCGGCATGGCCGCCAAGAGCGACACTGAAACATACGCACC GCACAAGGGTGCATGAATCGATTGAAAAGTGCGGGGCGGCTGATGCCCTA CGGCGGAGGAATACGGCCATGTAACGCATCGATTTATGTACCACGACGGT TGTGACGCGATGCACTCGCTGCCTTTGTTTTTCCCTTTTGGCGCCTCGCG CGTGCGCTGCTCTGATGCACCGACGCGGTTGTTTTTTTTCTTTTCTTTAC GCAGGAGTACCTCGAGATGAACGGACTGGCTGGGGGTCCTCCAGGGGTGA GACACACGCTATAGTTGTAGGTGCTTTGTGTTTGACAAGCAAGTCGTCGC ATTTCGATTGTTTGTTTTGTTTGGCTGAGAATCGTTTGTACCACGACCAT GTGTGAGTTCATAAGTAGTTTTCGGCCACCGCGCTGTATCTCTCTGTCGC TCGACCAGTGGTCCGGTGCTGTCGTTGAGCGCGATTGCCTTTTTGCAGAA ATGGGCCGCTGCCATGCGTAGCTTGTCGAAAGAGGTGATCCTATCAGGCC ATGCCCAAGGTTCAACAATCGATGGTACGTAAAGTAATTCATTAATACCA TTTGGTTTCCACGTACAGACCAGGAAGACCTCTGCTGCAGGCAGGGGCCA CTGGGAAGCGATGGTAAATGAACATCGAAGTTGCCCAACGACCAGTGTGA AATCCTTGGACGTTGAGCCCTTTAAAGTGTTCTACCTCTATAGCCAGAAC CAACGGGACGCATTGCGTGTCTCATCACCACCCTGCGCCTGCTTCTCTCC TTTGCTGCTATTTGTCACGTTGTGTGTGTGTGGCATCAGGCGAAGGACGT GTTCTGGTCCCAGGCACAGGCGCAGGCTAGGGAACACGTCGGTGTTCGGC AGGTCCTGGCTGCCCTCAACAGGCTCTGGAAACCGGACGCGCACTCGCCA GCCGACCTCACCAAGAGCCTCAGGTTTGTTCCATGTTGTTGTCGCAACAG ATATTGCCGCTGCTGCTACTGCTGCTGCTCCTGCTGCTGCTGCTGCTGCT GCTGCTTCTACTGCTGCTGCTGCTGCTGTTGCTGCTCTGTGCTTTTCTGT TCGACGTTGGGTAGGTGCTGTTGCTTGCGGCGCATGCTGGTCTTTCCGCT TGTCCGATTTAGCGTGTGCCATCCAATAAGAGGACCAGGGCCAAGGGCAC CGCAATGCCTGCCGTCTGTTTTCGTTAAGACCTTGAGAAGACACCATGGT TAGTTTGTGCCTGGTTTGTTGGTGATGTGTCACTAGGTTCGCTCGACGAG GCCCCCGTTGTTTTAGAGCGTTCGTCACAGCACTTTCTTACAGCTGTCCT GCACGAACAAATAACCTGCGAAACGCAACGTATTTTTTGTCCTTTGGGTG CCGTTCGCTGTCATCTGCGGCAGTTTCTGCGATCGCGCCTTCGTGGGGAA CCCCACGTGCTCGAGCCTCAAAGGCCGAGAGTCGGCGGTCATGGCCGGGG GCACCGGCGGATCCCAGCGGTGGCTGAACCCCCACCTCCACCAGGTATGA CGGCTTTCGCGTTGCGGGAAGGGCTGTTTCCTTGCTCCTCCGCTAGTCAA GCCGCCTTGAATCTTGATGCGTGCTCTCGCGCTCGCGTGCGGGCGGGTGT TTTGGGTCTCTCACTCTGTGTTGCCGTTACCGCGTTCCGTACCGTGTTCG TGTCGCACCGTGTCGTTCCGAGTCAACCCGGAATACACCATCTGGTGCGA GTGCACGGTCCGTCCCAGCCCGTCTCCATCTCCTACCACACGACCCGGTT TGCCGCACATTTTGCCGTTCCGCTTCCTCCCGTCCCATCCTTCGTTCCAA CCGCGCTGGCCACATACGACGTGTCTCACGTTCGGCTTCATTCCGTCCCA TCCCGTATTCGTTCCAACCGCATTGGCCTCAAACCACGTGTCTCACGTTC CGCTTCATCCCGTCCCATCCCGCGTTCGTTCCAATTCCATATATCGCATA TCCTCCCCAGGCATATGGCGACATCTTCCAGGGCCGCTGGGAGGACTGGG ATCCCTTCAAGGCCGGCCCGAGGATGAGGGCGGCAGAGAACGCGGCGTGT TCCTGGGGGGAGGATGATACCCCGTCGCCCCCGGGATCGATCGGCGGCGG GGCGCCGCCGCAGCCTTTCCGACCGTTCCAGGGCTTCCTGTCTTTCGGTC GTTGGGGCGAGGTCGGGAATGTG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13291:70..3042-

>mRNA_E-fasciculatus_F_contig13291.2478.1 ID=mRNA_E-fasciculatus_F_contig13291.2478.1|Name=mRNA_E-fasciculatus_F_contig13291.2478.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1248bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13291:70..3042- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GAGGACGGCCGGTTTCCGTTTTTCGCGACGCGTCAAATCAATCGGAGAGG
AGTTGTGGTGGTACGTGGCGTCGTCCCCGCCGACACGGCGTTGCGGTGGC
GAGATTCCTTGCTGGAGGACGGCCGGTTTCCGTTTTTCGCGACGCGTCAA
ATCAATCGGAGAGGAGTTGTGGTGGTACGTGGCGTCGTCCCCGCCGACAC
GGCGTTGCGGTGGCGAGATTCCTTGCTGGAGTACCTCGAGATGAACGGAC
TGGCTGGGGGTCCTCCAGGGGAGTACCTCGAGATGAACGGACTGGCTGGG
GGTCCTCCAGGGGCGAAGGACGTGTTCTGGTCCCAGGCACAGGCGCAGGC
TAGGGAACACGTCGGTGTTCGGCAGGTCCTGGCTGCCCTCAACAGGCTCT
GGAAACCGGACGCGCACTCGCCAGCCGACCTCACCAAGAGCCTCAGGCGA
AGGACGTGTTCTGGTCCCAGGCACAGGCGCAGGCTAGGGAACACGTCGGT
GTTCGGCAGGTCCTGGCTGCCCTCAACAGGCTCTGGAAACCGGACGCGCA
CTCGCCAGCCGACCTCACCAAGAGCCTCAGTTTCTGCGATCGCGCCTTCG
TGGGGAACCCCACGTGCTCGAGCCTCAAAGGCCGAGAGTCGGCGGTCATG
GCCGGGGGCACCGGCGGATCCCAGCGGTGGCTGAACCCCCACCTCCACCA
GTTTCTGCGATCGCGCCTTCGTGGGGAACCCCACGTGCTCGAGCCTCAAA
GGCCGAGAGTCGGCGGTCATGGCCGGGGGCACCGGCGGATCCCAGCGGTG
GCTGAACCCCCACCTCCACCAGGCATATGGCGACATCTTCCAGGGCCGCT
GGGAGGACTGGGATCCCTTCAAGGCCGGCCCGAGGATGAGGGCGGCAGAG
AACGCGGCGTGTTCCTGGGGGGAGGATGATACCCCGTCGCCCCCGGGATC
GATCGGCGGCGGGGCGCCGCCGCAGCCTTTCCGACCGTTCCAGGGCTTCC
TGTCTTTCGGTCGTTGGGGCGAGGTCGGGAATGTGGCATATGGCGACATC
TTCCAGGGCCGCTGGGAGGACTGGGATCCCTTCAAGGCCGGCCCGAGGAT
GAGGGCGGCAGAGAACGCGGCGTGTTCCTGGGGGGAGGATGATACCCCGT
CGCCCCCGGGATCGATCGGCGGCGGGGCGCCGCCGCAGCCTTTCCGACCG
TTCCAGGGCTTCCTGTCTTTCGGTCGTTGGGGCGAGGTCGGGAATGTG
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