prot_E-fasciculatus_F_contig13286.2472.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13286.2472.1
Unique Nameprot_E-fasciculatus_F_contig13286.2472.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length209
Homology
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BLAST of mRNA_E-fasciculatus_F_contig13286.2472.1 vs. uniprot
Match: A0A6H5KH56_9PHAE (PHD domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH56_9PHAE)

HSP 1 Score: 203 bits (517), Expect = 7.990e-57
Identity = 167/184 (90.76%), Postives = 172/184 (93.48%), Query Frame = 0 
Query:    2 GGSKSNAHSPAGVQPSAPAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCLRRSPEDLAREASEILADADRAMLQLEPWCLAIDNSNLGDEGDGAAERGESNTAPWILAVRWWWLKGIRARQGGQAEEALEHFRRCESALRGRGREQRAQ 185
            GGSKSNAHS AGVQPSAP G    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    CLRRSPEDLAREASEILADADRA+LQLEPWCLAIDNSNLGD+GDGAA+ GESNTAPW+LAVRWWWLKGIRARQGGQAEEALEHF RCESALRGRGREQ+AQ
Sbjct:  694 GGSKSNAHSLAGVQPSAPVGGANPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----CLRRSPEDLAREASEILADADRAILQLEPWCLAIDNSNLGDDGDGAAKHGESNTAPWVLAVRWWWLKGIRARQGGQAEEALEHFHRCESALRGRGREQQAQ 873
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BLAST of mRNA_E-fasciculatus_F_contig13286.2472.1 vs. uniprot
Match: D7FMA3_ECTSI (PHD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMA3_ECTSI)

HSP 1 Score: 202 bits (513), Expect = 2.840e-56
Identity = 166/184 (90.22%), Postives = 169/184 (91.85%), Query Frame = 0 
Query:    2 GGSKSNAHSPAGVQPSAPAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCLRRSPEDLAREASEILADADRAMLQLEPWCLAIDNSNLGDEGDGAAERGESNTAPWILAVRWWWLKGIRARQGGQAEEALEHFRRCESALRGRGREQRAQ 185
            GGSKSNAHSPAGVQPSAP G    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    CLRRSPEDLAREAS+ILADADRAMLQLEPWCLAIDNSNLGD+GDGAA  GESNTAPW+L VRWWWLKGIRARQGGQAEEALEHF  CE ALRGRGREQRAQ
Sbjct:  626 GGSKSNAHSPAGVQPSAPVGGADPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----CLRRSPEDLAREASDILADADRAMLQLEPWCLAIDNSNLGDDGDGAAGHGESNTAPWVLVVRWWWLKGIRARQGGQAEEALEHFHLCERALRGRGREQRAQ 805
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13286.2472.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KH56_9PHAE7.990e-5790.76PHD domain-containing protein (Fragment) n=1 Tax=E... [more]
D7FMA3_ECTSI2.840e-5690.22PHD domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13286contigE-fasciculatus_F_contig13286:898..1834 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13286.2472.1mRNA_E-fasciculatus_F_contig13286.2472.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13286 897..1834 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13286.2472.1 ID=prot_E-fasciculatus_F_contig13286.2472.1|Name=mRNA_E-fasciculatus_F_contig13286.2472.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=209bp
TGGSKSNAHSPAGVQPSAPAGGGANPPAAAAAAVTAAAAPAGTAGAAATP
AAASAPTAVVATDGAAAEVGGKKNEGAGGGGGGGCLRRSPEDLAREASEI
LADADRAMLQLEPWCLAIDNSNLGDEGDGAAERGESNTAPWILAVRWWWL
KGIRARQGGQAEEALEHFRRCESALRGRGREQRAQRSGGASSGQEEEKGD
DDNGEDEEE
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