mRNA_E-fasciculatus_F_contig13279.2467.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig13279.2467.1
Unique NamemRNA_E-fasciculatus_F_contig13279.2467.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig13279.2467.1 vs. uniprot
Match: D8LEE1_ECTSI (NADH:ubiquinone oxidoreductase complex I n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEE1_ECTSI)

HSP 1 Score: 481 bits (1237), Expect = 5.130e-166
Identity = 239/248 (96.37%), Postives = 245/248 (98.79%), Query Frame = 1
Query:    1 IIVQSGVDVRDEATLKNKALFEGVTQVVSALGPRFGEEGSSSEAVDFQGVQSAIEAAEAFLEPGDGCSAAPGDEERILVAPGDSGSDERGPGGAWQPLDDVIMGGRSSSAWQKGVGGGVLERQSGKTFGRWAGTLVTEGGGFCGTVIKDMPFDATGYDGIRIRVRGDGSRYKFRLKPDTKLDNTAERQYQAPFDTVKGEWVEVDIPFESFVAVKRNYVDFNAPRVNEGPAGGKMLSLGLVLSRFGFNE 744
            + VQSGVDVRDEATLKNKALF+GVTQVVSALGPRFGEEGSSSEAVDFQGVQSAIEAAEAFLE GDG SAAPGD+ER+LVAPGDSGSDERGPGGAWQPLDDVIMGGRSSSAWQKGVGGGVLERQSGKTFGRWAGTLVTEGGGFCGTVIKDMPFDATGYDGIRIRVRGDGSRYKFRLKPDTKLDNTAERQYQAPFDTVKGEW+EVD+PFESFVAVKRNYVDFNAPRVNEGPAGGKMLSLGLVLSRFGFNE
Sbjct:  141 LFVQSGVDVRDEATLKNKALFDGVTQVVSALGPRFGEEGSSSEAVDFQGVQSAIEAAEAFLEQGDGSSAAPGDQERVLVAPGDSGSDERGPGGAWQPLDDVIMGGRSSSAWQKGVGGGVLERQSGKTFGRWAGTLVTEGGGFCGTVIKDMPFDATGYDGIRIRVRGDGSRYKFRLKPDTKLDNTAERQYQAPFDTVKGEWIEVDLPFESFVAVKRNYVDFNAPRVNEGPAGGKMLSLGLVLSRFGFNE 388          
BLAST of mRNA_E-fasciculatus_F_contig13279.2467.1 vs. uniprot
Match: A0A836CBF4_9STRA (NADH:ubiquinone oxidoreductase complex I n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBF4_9STRA)

HSP 1 Score: 207 bits (528), Expect = 3.550e-60
Identity = 122/246 (49.59%), Postives = 153/246 (62.20%), Query Frame = 1
Query:    7 VQSGVDVRDEATLKNKALFEGVTQVVSALGPRFGEEGSSSEAVDFQGVQSAIEAAEAFLEPGDGCSAAPGDEERILVAPGDSGSDERGPGGAWQPLDDVIMGGRSSSAWQKGVGGGVLERQSGKTFGRWAGTLVTEGGGFCGTVIKDMPFDATGYDGIRIRVRGDGSRYKFRLKPDTKLDNTAERQYQAPFDTVKGEWVEVDIPFESFVAVKRNYVDFNAPRVNEGPAGGKMLSLGLVLSRFGFNE 744
            V+ G+DV  E     +  FEGVTQVVS LGP F +   ++EAVD++G  + + A E     G   +AA       L    D  S    P   W PLDDVIMGG+SSSAW    G         + F RW+G LVT+GGGFCGTV+K + FD  GYDGIR+ VRGDGSR+KFRLKP   +    E QYQA FDTV G WV  ++PF +F AV+RN V + AP V++GP+G KM S+G+VLSRF +NE
Sbjct:  115 VKEGLDVTAEEI--PETFFEGVTQVVSCLGPSFSDPALNAEAVDYRGNAAVLRACE---RAGLASTAAAAAASAPLC---DFASGASLP--EWAPLDDVIMGGKSSSAWDAAAGD--------RDFARWSGELVTDGGGFCGTVVKKLNFDTAGYDGIRLVVRGDGSRFKFRLKP-ADMAQANEYQYQASFDTVDGAWVTAELPFSAFTAVRRNDVIYAAPPVDKGPSGTKMSSIGIVLSRFEYNE 341          
BLAST of mRNA_E-fasciculatus_F_contig13279.2467.1 vs. uniprot
Match: A0A383VFN0_TETOB (Uncharacterized protein n=3 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VFN0_TETOB)

HSP 1 Score: 152 bits (384), Expect = 8.540e-39
Identity = 110/259 (42.47%), Postives = 141/259 (54.44%), Query Frame = 1
Query:    1 IIVQSGVDVRDEATLKNKALFEGVTQVVSALGPRFGE---------EGSSSEAVDFQGVQSAIEAAEAFLEPGDGCSAAPGDEERILVAPGDSGSDERGPGGAWQPLDDVIMGGRSSSAWQKGVGGGVLERQSGKTFGRWAGTLVTEGGGFCGTVIKDMPFDATGYDGIRIRVRGDGSRYKFRLKPDTKLDNTAERQYQAPFDTV-KGEWVEVDIPFESFVAVKRNYVDFNAPRVNEGPAGGKMLS-LGLVLSRFGFNE 744
            +I  +GVDV + ATL  + LFEGVTQVVSALGP  G          +G S E V+ QG+ + + A     +   G ++A        + P  S  D      AW+ LDDVIMGG SSSA         LE  +  +   W G LV EGGGFCG   K +  D +GYDG+++RV+GDG  +KF +K D   D T E  YQA FDT  +G+W  V +P+ SFV VK+   D      N GP     +S LGLVLSRF FN+
Sbjct:  169 LITAAGVDVTNPATLSAE-LFEGVTQVVSALGPVAGRLPDGSFGYIDGMSPERVETQGMANIVAA---LAKHAPGIASAGSGISSSSILPMASAEDLA----AWERLDDVIMGGNSSSA---------LEAAADGSGAVWKGDLVVEGGGFCGARTKALDMDLSGYDGLQLRVKGDGQIFKFNIKTDQ--DATPESTYQATFDTSPEGDWTTVRLPWSSFVPVKQAQSD-----PNRGPLDPARISKLGLVLSRFEFNK 403          
BLAST of mRNA_E-fasciculatus_F_contig13279.2467.1 vs. uniprot
Match: A0A0D2N0U4_9CHLO (Uncharacterized protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2N0U4_9CHLO)

HSP 1 Score: 142 bits (357), Expect = 2.410e-35
Identity = 108/259 (41.70%), Postives = 138/259 (53.28%), Query Frame = 1
Query:    1 IIVQSGVDVRDEATLKNKALFEGVTQVVSALGPRFGE---------EGSSSEAVDFQGVQSAIEAAEAFLEPGDGCSAAPGDEERILVAPGDSGSDERGPGGAWQPLDDVIMGGRSSSAWQKGVGGGVLERQSGKTFGRWAGTLVTEGGGFCGTVIKDMPFDATGYDGIRIRVRGDGSRYKFRLKPDTKLDNTAERQYQAPFDTVK-GEWVEVDIPFESFVAVKRNYVDFNAPRVNEGPAGGKMLS-LGLVLSRFGFNE 744
            + VQ+GVDV DE+TL    LF GVTQVVSALG   G          +G + EAV+ +G+ + + A +  L        AP       V P  +  D      AW+ LDDVIMGG SSS          LE  SG     W G LV EGGGFCG   + +  D + +DG+R+RV+GDG  +KF +K   + D T E  YQA FDT + G+W  V +P+ SFV VKR   D         P  G+ +S LGLVLSRF FN+
Sbjct:   86 LFVQAGVDVTDESTL-TPDLFAGVTQVVSALGGVTGRLPDGTFGYLDGMTPEAVEAKGMANVVAAMKQHL--------APQIRTTQEVLPMRTAEDLE----AWERLDDVIMGGSSSSGLT------ALEDGSGAA---WKGDLVVEGGGFCGARTRKLGLDLSQFDGLRMRVKGDGQTFKFNIKTADQED-TPESTYQATFDTSEEGDWTTVHLPWHSFVPVKRAQSDPQGE-----PLRGEAISKLGLVLSRFEFNK 316          
BLAST of mRNA_E-fasciculatus_F_contig13279.2467.1 vs. uniprot
Match: A0A7S0RVS4_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RVS4_9CHLO)

HSP 1 Score: 139 bits (350), Expect = 3.960e-35
Identity = 102/254 (40.16%), Postives = 135/254 (53.15%), Query Frame = 1
Query:    7 VQSGVDVRDEATLKNKALFEGVTQVVSALGPRFGE---------EGSSSEAVDFQGVQSAIEAAEAFLEPGDGCSAAPGDEERILVAPGDSGSDERGPGGAWQPLDDVIMGGRSSSAWQKGVGGGVLERQSGKTFGRWAGTLVTEGGGFCGTVIKDMPFDATGYDGIRIRVRGDGSRYKFRLKPDTKLDNTAERQYQAPFDTVKGEWVEVDIPFESFVAVKRNYVDFNAPRVNEGPAGGKMLSLGLVLSRFGFN 741
            V+SGVD+ +  TL  + LF GV+QVV+ LGP FG          +  +SE V+  GV++ +   +  L         P  ++R L+    +          W+ LDDVIMGGRSSS W+     GV         G W G LV EGGGFCGT  +  P      DGI +RV+GDG RYK  L+  +  D   E  YQA FDTV+G+W+ VDIPF  FVAV+R   D NAP ++  P+    +S   +LSRF  N
Sbjct:  197 VKSGVDITNVDTL-TEDLFRGVSQVVNTLGPVFGRLPDGGFGYFDDMTSERVESLGVRNIVSTVQREL-------GVPQRQDRELLTINSTAKVS-----LWERLDDVIMGGRSSSGWEFDESAGV---------GVWKGQLVLEGGGFCGTRRRVDPRGFEQSDGICLRVKGDGQRYKVSLRTPSP-DGMHECLYQAGFDTVEGQWMTVDIPFGEFVAVRRGNEDRNAPPLD--PSAIDRISF--LLSRFELN 423          
BLAST of mRNA_E-fasciculatus_F_contig13279.2467.1 vs. uniprot
Match: A0A7S3QMA4_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3QMA4_DUNTE)

HSP 1 Score: 141 bits (355), Expect = 6.960e-35
Identity = 96/258 (37.21%), Postives = 136/258 (52.71%), Query Frame = 1
Query:    1 IIVQSGVDVRDEATLKNKALFEGVTQVVSALGPRFGEE---------GSSSEAVDFQGVQSAIEAAEAFLEPGDGCSAAPGDEERILVAPGDSGSDERGPGGAWQPLDDVIMGGRSSSAWQKGVGGGVLERQSGKTFGRWAGTLVTEGGGFCGTVIKD-MPFDATGYDGIRIRVRGDGSRYKFRLKPDTKLDNTAERQYQAPFDTVKGEWVEVDIPFESFVAVKRNYVDFNAPRVNEGPAGGKMLSLGLVLSRFGFNE 744
            +  ++GVDV    TL+   L++GVTQVV+ LG +FG++         G + EAV+  GVQ+ + A    +    G        +   + P  +G         W  +DDVIMGG+SSS W+            G    RW G L+ EGGGFCG   K  M  D + YDGI +RV+GDG  +K  +K   ++D T E  YQA FDTV G+W +V +P+ +FV VKR   D +   ++      K++ LG VLSRF FN+
Sbjct:  172 LFYETGVDVTKPETLRRPELWKGVTQVVTCLGGKFGKQPDGSMGYIDGCTPEAVEALGVQNLVAAMSEQVPKQTGV-------QYQAMMPEAAGEQVA----MWDRMDDVIMGGQSSSLWEPAP-------DEGPHVARWKGDLIVEGGGFCGARTKPLMQTDWSAYDGIALRVKGDGQIFKLNIKTLEQVD-TPESTYQATFDTVDGQWHDVLLPWHNFVPVKRAQSDPDGAPLDPS----KIVKLGTVLSRFEFNK 406          
BLAST of mRNA_E-fasciculatus_F_contig13279.2467.1 vs. uniprot
Match: A0A7S1SQV2_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SQV2_9CHLO)

HSP 1 Score: 140 bits (352), Expect = 2.090e-34
Identity = 100/252 (39.68%), Postives = 139/252 (55.16%), Query Frame = 1
Query:   16 GVDVRDEATLKNKALFEGVTQVVSALGPRFGEE---------GSSSEAVDFQGVQSAIEAAEAFLEP-GDGCSAAPGDEERILVAPGDSGSDERGPGGAWQPLDDVIMGGRSSSAWQKGVGGGVLERQSGKTFGRWAGTLVTEGGGFCGTVIKDMPFDATGYDGIRIRVRGDGSRYKFRLKPDTKLDNTAERQYQAPFDTVKGEWVEVDIPFESFVAVKRNYVDFNAPRVNEGPAGGKMLSLGLVLSRFGFN 741
            GVD+    TL ++ LF GV QVV+A+GPRFG++         GSS   VD +GV + + AA+A L   G   SAA    E + +A  +           W+PL+DVIMGG+SSS  +    G     + G     W+GT++ EGGGFCG   +        +DGIR+RV+G G R+K  LK + ++D   E  YQA F+TV+GEWVEV +P+  F  VKR   D + P ++       +  +GLV SRF FN
Sbjct:  204 GVDISRPETL-SRELFRGVAQVVAAVGPRFGKQADGSMGFGAGSSPAEVDAEGVAALVAAAQAHLPSVGTRRSAA----EVLSLATEEDVQ-------RWRPLNDVIMGGQSSSGMELLTNG-----EDGSAV--WSGTVIVEGGGFCGLRTEPADLKLDDFDGIRLRVKGGGQRFKLNLKTEEQMD-VPESTYQACFNTVEGEWVEVFLPWHEFRCVKRASFDPSGPPLDPT----HVRQVGLVYSRFEFN 431          
BLAST of mRNA_E-fasciculatus_F_contig13279.2467.1 vs. uniprot
Match: A0A2V0P7E0_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P7E0_9CHLO)

HSP 1 Score: 139 bits (350), Expect = 4.050e-34
Identity = 99/258 (38.37%), Postives = 136/258 (52.71%), Query Frame = 1
Query:    1 IIVQSGVDVRDEATLKNKALFEGVTQVVSALGPRFGE---------EGSSSEAVDFQGVQSAIEAAEAFLEPGDGCSAAPGDEERILVAPGDSGSDERGPGGAWQPLDDVIMGGRSSSAWQKGVGGGVLERQSGKTFGRWAGTLVTEGGGFCGTVIKDMPFDATGYDGIRIRVRGDGSRYKFRLKPDTKLDNTAERQYQAPFDTVK-GEWVEVDIPFESFVAVKRNYVDFNAPRVNEGPAGGKMLSLGLVLSRFGFNE 744
            + V +GVDV  E TL  + LF GVTQVVSALG   G          +G + EAV+ +G+ + + A   F+ P    S        ++++   +   E     AW+ LDDVIMGG SSS       GG  E         W G L+ EGGGFCG   + +  D +G+DG+++RV+ DG  +K  +K   + D T E  YQA FDT + G+W  V +P+ +FV VKR   D   P+  E   G  +  LGLVLSRF FN+
Sbjct:  174 LFVDAGVDVTKEETLTEE-LFRGVTQVVSALGGVAGRLPDGGFGYLDGMTPEAVEAKGIANVVAAMARFMAPAKRAS-------EVVLSMRTAEDLE-----AWERLDDVIMGGSSSSGLGPAADGGGAE---------WKGDLIVEGGGFCGARTRKLGLDLSGFDGLQLRVKSDGQTFKLNVKTADQED-TPESTYQATFDTAEDGDWSTVRLPWHTFVPVKRAQSD---PQ-GEPLTGDSISKLGLVLSRFEFNK 404          
BLAST of mRNA_E-fasciculatus_F_contig13279.2467.1 vs. uniprot
Match: A0A5J4Y258_9CHLO (Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y258_9CHLO)

HSP 1 Score: 138 bits (348), Expect = 7.840e-34
Identity = 97/257 (37.74%), Postives = 136/257 (52.92%), Query Frame = 1
Query:   19 VDVRDEATLKNKALFEGVTQVVSALGPRFGEE---------GSSSEAVDFQGVQSAIEAAEAFLEPGDGCSAAPGDEERILVAPGDSGSDERGPGGAWQPLDDVIMGGRSSSAWQK-----GVGGGVLERQSGKTFGR-WAGTLVTEGGGFCGTVIKDMPFDATGYDGIRIRVRGDGSRYKFRLKPDTKLDNTAERQYQAPFDTVKGEWVEVDIPFESFVAVKRNYVDFNAPRVNEGPAGGKMLSLGLVLSRFGFNE 744
            VD+ D A L +K L++G++QVV+ +GP FG +           +SE VD +G+ +  +AAE FL           + E++L     S +D       W+ LDD IMGG+S S  Q      G  G   ++Q     G  W G  +T+GGGFCG   K +  +   +DGI +RV+GDG  YKF LK   ++ N  E  YQA +DT+ GEWV V +P+  FV V R   D  A  ++  PA  K +  GLVLSRF +N 
Sbjct:  181 VDITDSAALMSKELWQGISQVVTTVGPAFGRQPDGGMGYIDNMTSERVDAEGISNIAKAAEHFLP----AQRFQPEVEQVLSMR--SAADLE----VWEKLDDTIMGGKSGSYLQTAEDLHGFQGDYKDKQPYDFEGSVWRGETITDGGGFCGARTKMLDLNLQRFDGISLRVKGDGQTYKFNLKTADQM-NVPESTYQAQYDTIDGEWVTVYMPWHEFVPVTRAQYDSKAKPLD--PAQVKQI--GLVLSRFHYNS 422          
BLAST of mRNA_E-fasciculatus_F_contig13279.2467.1 vs. uniprot
Match: A0A4D9DB39_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DB39_9STRA)

HSP 1 Score: 136 bits (342), Expect = 4.500e-33
Identity = 106/274 (38.69%), Postives = 141/274 (51.46%), Query Frame = 1
Query:   13 SGVDVRDEATLKN---KALFEGVTQVVSALGPRFGEE---------GSSSEAVDFQGVQSAIEAA--------EAFLEPGDGCSAAPGDEERILVAPGDSGSDERGPGGAWQPLDDVIMGGRSSSAWQKGVGGGVLERQSGKTFGRWAGTLVTEGGGFCGTVIK--DMPFDATGYDGIRIRVRGDGSRYKFRLKPDTKLDNTAERQYQAPFDTVK--------GEWVEVDIPFESFVAVKRNYVDFNAPRVNEGPAGGKMLSLGLVLSRFGFNE 744
            SG+DV + ATL +    A+ +  + VV ALGP  G +         G +SE VDF+GV   I+A         E   E G   +A   +E +  +   ++  D       WQ LDDVIMGG+SSS+ +       L+R+ G  +  + G+LV EGGGFCGT     D P D +G+DG+ +RVRGDG RYK  LK    L   +E  YQA FDT+         G W  + IPF  F  V RN VD+ A  +   P+    +SLGLV SRF FN 
Sbjct:   81 SGIDVTNAATLSSGNVPAVLKEASHVVVALGPVGGVQPGGGFGFFPGLTSEDVDFKGVTKVIDAVVDAKGVVKEGAGEGGKKQAAGEVEERKRTLFRFETPEDVA----KWQRLDDVIMGGQSSSSLE-------LDREKG--YATYTGSLVVEGGGFCGTRASGGDAPVDLSGFDGVTLRVRGDGHRYKLNLKTTETL--ASENVYQAAFDTLPLQDAGEGAGGWQTITIPFHRFYPVVRNRVDYKAAPLQ--PSSQAAVSLGLVYSRFEFNR 337          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13279.2467.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEE1_ECTSI5.130e-16696.37NADH:ubiquinone oxidoreductase complex I n=2 Tax=E... [more]
A0A836CBF4_9STRA3.550e-6049.59NADH:ubiquinone oxidoreductase complex I n=1 Tax=T... [more]
A0A383VFN0_TETOB8.540e-3942.47Uncharacterized protein n=3 Tax=Tetradesmus obliqu... [more]
A0A0D2N0U4_9CHLO2.410e-3541.70Uncharacterized protein n=1 Tax=Monoraphidium negl... [more]
A0A7S0RVS4_9CHLO3.960e-3540.16Hypothetical protein (Fragment) n=1 Tax=Pyramimona... [more]
A0A7S3QMA4_DUNTE6.960e-3537.21Hypothetical protein n=1 Tax=Dunaliella tertiolect... [more]
A0A7S1SQV2_9CHLO2.090e-3439.68Hypothetical protein n=1 Tax=Tetraselmis chuii Tax... [more]
A0A2V0P7E0_9CHLO4.050e-3438.37Uncharacterized protein n=1 Tax=Raphidocelis subca... [more]
A0A5J4Y258_9CHLO7.840e-3437.74Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2... [more]
A0A4D9DB39_9STRA4.500e-3338.69Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13279contigE-fasciculatus_F_contig13279:286..3625 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score483.8
Seed ortholog evalue4.8e-134
Seed eggNOG ortholog2880.D8LEE1
EggNOG free text desc.divinyl chlorophyllide a 8-vinyl-reductase activity
EggNOG OGsCOG0702@1,KOG1203@2759
COG Functional cat.GM
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons5
Model size744
Cds size744
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13279.2467.1prot_E-fasciculatus_F_contig13279.2467.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig13279 286..3625 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927830.3256876-CDS-E-fasciculatus_F_contig13279:285..4231622927830.3256876-CDS-E-fasciculatus_F_contig13279:285..423Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13279 286..423 -
1695995712.9786837-CDS-E-fasciculatus_F_contig13279:285..4231695995712.9786837-CDS-E-fasciculatus_F_contig13279:285..423Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13279 286..423 -
1622927830.3383698-CDS-E-fasciculatus_F_contig13279:959..11211622927830.3383698-CDS-E-fasciculatus_F_contig13279:959..1121Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13279 960..1121 -
1695995712.9986897-CDS-E-fasciculatus_F_contig13279:959..11211695995712.9986897-CDS-E-fasciculatus_F_contig13279:959..1121Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13279 960..1121 -
1622927830.3526337-CDS-E-fasciculatus_F_contig13279:1629..17961622927830.3526337-CDS-E-fasciculatus_F_contig13279:1629..1796Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13279 1630..1796 -
1695995713.0141628-CDS-E-fasciculatus_F_contig13279:1629..17961695995713.0141628-CDS-E-fasciculatus_F_contig13279:1629..1796Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13279 1630..1796 -
1622927830.3638923-CDS-E-fasciculatus_F_contig13279:2384..25831622927830.3638923-CDS-E-fasciculatus_F_contig13279:2384..2583Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13279 2385..2583 -
1695995713.0239074-CDS-E-fasciculatus_F_contig13279:2384..25831695995713.0239074-CDS-E-fasciculatus_F_contig13279:2384..2583Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13279 2385..2583 -
1622927830.3744328-CDS-E-fasciculatus_F_contig13279:3547..36251622927830.3744328-CDS-E-fasciculatus_F_contig13279:3547..3625Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13279 3548..3625 -
1695995713.0319166-CDS-E-fasciculatus_F_contig13279:3547..36251695995713.0319166-CDS-E-fasciculatus_F_contig13279:3547..3625Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13279 3548..3625 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig13279.2467.1

>prot_E-fasciculatus_F_contig13279.2467.1 ID=prot_E-fasciculatus_F_contig13279.2467.1|Name=mRNA_E-fasciculatus_F_contig13279.2467.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=248bp
IIVQSGVDVRDEATLKNKALFEGVTQVVSALGPRFGEEGSSSEAVDFQGV
QSAIEAAEAFLEPGDGCSAAPGDEERILVAPGDSGSDERGPGGAWQPLDD
VIMGGRSSSAWQKGVGGGVLERQSGKTFGRWAGTLVTEGGGFCGTVIKDM
PFDATGYDGIRIRVRGDGSRYKFRLKPDTKLDNTAERQYQAPFDTVKGEW
VEVDIPFESFVAVKRNYVDFNAPRVNEGPAGGKMLSLGLVLSRFGFNE
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mRNA from alignment at E-fasciculatus_F_contig13279:286..3625-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig13279.2467.1 ID=mRNA_E-fasciculatus_F_contig13279.2467.1|Name=mRNA_E-fasciculatus_F_contig13279.2467.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3340bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13279:286..3625- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATCATCGTTCAGAGCGGCGTTGACGTCAGGGACGAGGCAACTCTGAAGAA CAAGGCCTTGTTTGAGGGTGTGACGCAGGTGGGCTCTAGGAGAACCTATT GTAACATCGTCCGTGCGACAGCAAGCAGTCGCGTGTGGTTTGAGTGGTTG CTGATCCCTGTGTGGAAGGGTGAGATCGTCGAGACCTGTGCCTTTGGGGT GACACGTCCCGTGGCGTCGTGGCATCCATCGTCGGAGTCGAGGGCTAACG GTGGTTACACTGCTGTGTGGTGAGGCAGCTAAGAGAGTCGAAACGAAATC CTGCCGGCTGATGGTGGAAACCCCATGTATCTCGAGCCATGTCTCCTTCT TGCCGCAAGAGGATGTATTACTTTCGTATTTTGGTTTGTAGATAGCCGTG AGAGGGTACTGTAATGCTGTAAAACTGCGCCAAGATCAGCGTTGAAATCG GGCATGGGTTGGTCGATTCGATTCATCACATGAGCCATGCGATTGATGAT GCGCACCACGGTAGTGTTATTTTCTCTCTGCGCCGATGTGATGGCCCAAG GGTCCTGCGATGACGGTCGGGCTGTATTGTACGAAGAATGAATAGGTGTC GCGTGCCGCATGATGATATCTATCCTCGTCACGTTCTTTTGTGTATCCCT CTTTTTTTGTAGATTTTTGTCGTCGCTTCAAATAATTCATGTGATTGACT AAATGTGCGTTGCGACGTTGGGCTCGGGCGTCATCGATGGTCACGACCTC CGCGACCACCCTCTCCGCAAACGAGACGCTTATATCATAAGCAATATCTT TCCACTTCCACGAAGCCACCAAACTGACGACCCCTCTAGACTAAAGCGAC CTGAATCGCGTTCGCATTCCCGGTTCATTCCATCTTTGGCCTCCTCCTCA CAACCATTATCTCGACCTCGAATCAGTAATGACGGTACTGGGTAGAGAGA TCGGAACGGATTTTAATGTTAAGACAACTACTGGGCAGAGAGATCGGAAT AGATTTTAATGTGAAGACAACAACACACCCTCTCACTGACAGGTCGTATC AGCCCTTGGGCCGCGATTCGGCGAGGAGGGAAGCTCCTCCGAGGCTGTGG ACTTCCAGGGCGTGCAGTCCGCCATCGAGGCAGCCGAGGCGTTCCTCGAG CCAGGGGATGGCTGCTCAGCAGCCCCGGGTGACGAGGAACGAATCCTGGT TGCTCCGGGAGACAGCGGCAGCGACGAGCGGGGTCCCGGAGGTGGGAATT CGGAGTTGCCGCAGAAGCCGATGGTACCCCCCTGTATGTTATTGGTATGG ATTTCGAGGGTTCGTTTCGGGGGTTGTATCTCCGAAATCTCCCGTGCGCG GCCGCGTGACCCGAGGAAGCAGAGTTGGGCTGTTTATTTCCAAGAGAAAA TTGTGGCATCTATTGTAGAGACGTGACTATGGGTGTATGTTTTTTTTTTG GCACGGGGTGTTTTTGGTGTGTTTTGTTTGGGGTATTTTTTATTTTTTAT TGTTCAGTTTTGGCTCCGCATGATGTTGTGCACACACGCACACGCTCACC TCTTGGTGTTCGTGTTGTTGTTTTTTTTGTCAGGGCGTTGGCAAATGCGA AAAGTGCTCATCTTACCGCCCGAAGCGTGCCGATGACGAGGTGATTCCTG AAACGTACGGCAGAATTCCGCCCCGTCTTGGCTAAAAACCGTTGAGCCTG GACGAGGAGACGTGACCAGGGCGGAGCCCAATAATTAGGTTGGTTTGGGC CGGCCAAAACTAGATAGACAGGGCCCAGCTTTGATTGAAACTGGGTAAGT TTTGTTTGCTCACTCGATCGATGCCCTAGGTGCGTGGCAACCTCTGGACG ATGTCATCATGGGAGGAAGGAGTTCCAGTGCCTGGCAGAAGGGGGTGGGA GGGGGTGTGCTGGAGCGGCAGTCGGGGAAGACGTTCGGGCGCTGGGCGGG GACTCTGGTGACGGAGGGGGGTGGCTTCTGTGGCACCGTGATCAAGGTGC GGTGTGGCGCGGTTGGTGGTGGTGCAGGTGGTGGTTGATGTTGCTCGCTC GTGGTGGTGTTTGTTGGATGTTTGGTTGGGAGATTTGTTTCTCCCCGTTG TTTGAAAGCTTGTTTGCCGCCGTGCTTGGCGGTGGTGTGGTTTTGTTGTT TGTTTTCGTTTCGGCTTTGAGCGACAGGTTAGTCGTCAACTCGGCCAAAA AGTGGATTCCGATCACCAAGCCGATCGAACCATTCCACTATCGAGCAAGC AAGTGTGACCACGGGTCGGAGTCAACGGCACAAGTTCTGTGAGCGCTGGT TTGAAGTAAAGACAACGATAAAAACAGGCAAGAGCGATCGCCAACGTCGA CCATGGTCCCTCCCAACCGCCATACACTGGCGCGACAACCCCGTGACGTA CCTGGTAACCTTCACACAATCCAATCACATCCAAGACCAGACGGAAACCG AACTAAGCCCAAAACCCCAAACCACGACTAACCCCGTGTTCCTTGGCGAG GCAGGATATGCCCTTCGACGCCACGGGTTACGATGGCATTCGGATCCGGG TGCGCGGGGACGGCAGCCGTTACAAGTTCCGCCTCAAGCCAGACACGAAG CTGGACAACACTGCCGAGCGGCAATATCAGGCGCCGTTCGATACGGTCAA GGGAGAGTGGGTCGAGGTATGCATAGGGAGAGTAGAGGGGGCGAGGCAAA GCGATGAGGTTTAAGTCGGAACGATGTATGTACGAGGTGGTGTGTAGGGC AGCGCTTGCGGTGTTTCACAGAAGACGACGCCTCACACACAGAAAGAGCA GTTACCCGGTGATAAATGGAGTGTCCGGTTCGTTTGTGTAGTCTTATGGT TTTCTCAGGGCCTTCGAGCCCCCGTGCGGACGGTGAAAACGCCAAAACCA CTCAAGCCGACCCCCGATACCTCCCCCTCATCTCCCACTTGCATTCTACG ACCGTTCGTGACCAGGGAGGGCTGAGAGCCAATGCACATGAATGAATGTG CTGCTGCTAACCACCATCGTTGCCACCATATCCACGACGACCAACACAAC CAGCAGGCTGCCGCACTTGCTACTTTCGTGCAGATCGTGTTTCCGGACGC CAAGAGATTCATGACGTACCGCGCGAAAATCGCACCCGAACCTGGTGCTG ATCTAATTCTTCTGGTTCTGGTTCTGATTCTGGTTCTGATCCCGCCGACC AGGTGGATATTCCGTTCGAGAGCTTCGTCGCGGTGAAGCGTAACTACGTG GACTTCAACGCCCCGCGGGTGAACGAAGGCCCTGCTGGCGGCAAGATGCT AAGCCTAGGGCTCGTCCTCAGTCGGTTCGGTTTCAACGAG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13279:286..3625-

>mRNA_E-fasciculatus_F_contig13279.2467.1 ID=mRNA_E-fasciculatus_F_contig13279.2467.1|Name=mRNA_E-fasciculatus_F_contig13279.2467.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1488bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13279:286..3625- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATCATCGTTCAGAGCGGCGTTGACGTCAGGGACGAGGCAACTCTGAAGAA
CAAGGCCTTGTTTGAGGGTGTGACGCAGATCATCGTTCAGAGCGGCGTTG
ACGTCAGGGACGAGGCAACTCTGAAGAACAAGGCCTTGTTTGAGGGTGTG
ACGCAGGTCGTATCAGCCCTTGGGCCGCGATTCGGCGAGGAGGGAAGCTC
CTCCGAGGCTGTGGACTTCCAGGGCGTGCAGTCCGCCATCGAGGCAGCCG
AGGCGTTCCTCGAGCCAGGGGATGGCTGCTCAGCAGCCCCGGGTGACGAG
GAACGAATCCTGGTTGCTCCGGGAGACAGCGGCAGCGACGAGCGGGGTCC
CGGAGGTCGTATCAGCCCTTGGGCCGCGATTCGGCGAGGAGGGAAGCTCC
TCCGAGGCTGTGGACTTCCAGGGCGTGCAGTCCGCCATCGAGGCAGCCGA
GGCGTTCCTCGAGCCAGGGGATGGCTGCTCAGCAGCCCCGGGTGACGAGG
AACGAATCCTGGTTGCTCCGGGAGACAGCGGCAGCGACGAGCGGGGTCCC
GGAGGTGCGTGGCAACCTCTGGACGATGTCATCATGGGAGGAAGGAGTTC
CAGTGCCTGGCAGAAGGGGGTGGGAGGGGGTGTGCTGGAGCGGCAGTCGG
GGAAGACGTTCGGGCGCTGGGCGGGGACTCTGGTGACGGAGGGGGGTGGC
TTCTGTGGCACCGTGATCAAGGTGCGTGGCAACCTCTGGACGATGTCATC
ATGGGAGGAAGGAGTTCCAGTGCCTGGCAGAAGGGGGTGGGAGGGGGTGT
GCTGGAGCGGCAGTCGGGGAAGACGTTCGGGCGCTGGGCGGGGACTCTGG
TGACGGAGGGGGGTGGCTTCTGTGGCACCGTGATCAAGGATATGCCCTTC
GACGCCACGGGTTACGATGGCATTCGGATCCGGGTGCGCGGGGACGGCAG
CCGTTACAAGTTCCGCCTCAAGCCAGACACGAAGCTGGACAACACTGCCG
AGCGGCAATATCAGGCGCCGTTCGATACGGTCAAGGGAGAGTGGGTCGAG
GATATGCCCTTCGACGCCACGGGTTACGATGGCATTCGGATCCGGGTGCG
CGGGGACGGCAGCCGTTACAAGTTCCGCCTCAAGCCAGACACGAAGCTGG
ACAACACTGCCGAGCGGCAATATCAGGCGCCGTTCGATACGGTCAAGGGA
GAGTGGGTCGAGGTGGATATTCCGTTCGAGAGCTTCGTCGCGGTGAAGCG
TAACTACGTGGACTTCAACGCCCCGCGGGTGAACGAAGGCCCTGCTGGCG
GCAAGATGCTAAGCCTAGGGCTCGTCCTCAGTCGGTTCGGTTTCAACGAG
GTGGATATTCCGTTCGAGAGCTTCGTCGCGGTGAAGCGTAACTACGTGGA
CTTCAACGCCCCGCGGGTGAACGAAGGCCCTGCTGGCGGCAAGATGCTAA
GCCTAGGGCTCGTCCTCAGTCGGTTCGGTTTCAACGAG
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