prot_E-fasciculatus_F_contig13278.2466.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13278.2466.1
Unique Nameprot_E-fasciculatus_F_contig13278.2466.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length51
Homology
BLAST of mRNA_E-fasciculatus_F_contig13278.2466.1 vs. uniprot
Match: D7G1L2_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L2_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 2.760e-16
Identity = 41/50 (82.00%), Postives = 46/50 (92.00%), Query Frame = 0
Query:    1 AAAATDHHPVTVSQQREFEALQDERHRDHEARFRELEGEISKATKRKGRR 50
            AA A DHHPVTVS+QREFEALQ+E+HR+HEAR RELEG+ISKAT RKGRR
Sbjct:  605 AARAADHHPVTVSEQREFEALQNEKHREHEARLRELEGQISKATIRKGRR 654          
BLAST of mRNA_E-fasciculatus_F_contig13278.2466.1 vs. uniprot
Match: D7FHA3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHA3_ECTSI)

HSP 1 Score: 78.2 bits (191), Expect = 1.310e-15
Identity = 40/50 (80.00%), Postives = 45/50 (90.00%), Query Frame = 0
Query:    1 AAAATDHHPVTVSQQREFEALQDERHRDHEARFRELEGEISKATKRKGRR 50
            AA A DHHPVTVS+QREFEALQDE+HR+HEAR RELEG+I KAT R+GRR
Sbjct:  800 AARAVDHHPVTVSEQREFEALQDEKHREHEARLRELEGQIIKATIRQGRR 849          
BLAST of mRNA_E-fasciculatus_F_contig13278.2466.1 vs. uniprot
Match: A0A6H5KZF6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZF6_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 1.040e-13
Identity = 37/47 (78.72%), Postives = 41/47 (87.23%), Query Frame = 0
Query:    1 AAAATDHHPVTVSQQREFEALQDERHRDHEARFRELEGEISKATKRK 47
            AA A D HPVTVS+QREFEALQDE+HR+HE RFRELEGEISK  +RK
Sbjct: 1109 AAGAADLHPVTVSEQREFEALQDEKHREHEERFRELEGEISKVARRK 1155          
BLAST of mRNA_E-fasciculatus_F_contig13278.2466.1 vs. uniprot
Match: D7FH89_ECTSI (Putative Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH89_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 2.650e-13
Identity = 39/50 (78.00%), Postives = 43/50 (86.00%), Query Frame = 0
Query:    1 AAAATDHHPVTVSQQREFEALQDERHRDHEARFRELEGEISKATKR-KGR 49
            A  A DHHPVTV++QREFEALQ+E+H  HEAR RELEGEISKATKR KGR
Sbjct: 1095 ATTAADHHPVTVAEQREFEALQNEKHCGHEARLRELEGEISKATKREKGR 1144          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13278.2466.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G1L2_ECTSI2.760e-1682.00Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
D7FHA3_ECTSI1.310e-1580.00Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5KZF6_9PHAE1.040e-1378.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FH89_ECTSI2.650e-1378.00Putative Leucine Rich Repeat Protein n=1 Tax=Ectoc... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 26..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13278contigE-fasciculatus_F_contig13278:1709..2357 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13278.2466.1mRNA_E-fasciculatus_F_contig13278.2466.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13278 1601..2357 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13278.2466.1 ID=prot_E-fasciculatus_F_contig13278.2466.1|Name=mRNA_E-fasciculatus_F_contig13278.2466.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=51bp
AAAATDHHPVTVSQQREFEALQDERHRDHEARFRELEGEISKATKRKGRR
*
back to top