prot_E-fasciculatus_F_contig13273.2464.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13273.2464.1
Unique Nameprot_E-fasciculatus_F_contig13273.2464.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length327
Homology
BLAST of mRNA_E-fasciculatus_F_contig13273.2464.1 vs. uniprot
Match: D8LT64_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LT64_ECTSI)

HSP 1 Score: 370 bits (950), Expect = 2.750e-122
Identity = 257/333 (77.18%), Postives = 261/333 (78.38%), Query Frame = 0
Query:    1 GRGGSRLPXXXXXXXXXXXXXXXEVVSGVSTLVDLPLPNNGDYSQVPTDVLMASLALVARLVAAVASCLGVSLPHPLFPAASTRYATISVDSSPIERRSSQYPLCPLSKLAEIGVMGAASAVCKTMGAFDTALDLLRNDIVHLCVEGANVPVDSLWPAEALLLNLWELQQHAMSELRSFSPMVDVPLPMPRDPPEPKSAGFHRHGARGGESAPGSSRDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVGTALPGGGTEXXXXXXXXXXXXXXXXVEVDGG-------GRDQGDLRSEEADNPGGAGWRPREGLGGRLG 326
            GR  +RLPXXXXXXXXXXXXXXXEVVSGVSTLVDLPLPNNGDYSQVP DVLMASLALVARLVAAVASCLGVSLPHPLFPAASTRYATISVDSSP ER SSQYPLCPLSKLAEIGVMGAASAVCKTMGAFDTALDLLRNDIVHLCVEGANVPVDSLWPAEALLLNLWELQQHAMSELRS SPMVDVPLPMPRDPPEPKSAGFHR G+RGG S    SRDRA                                 XXXXXXXX            XXXXXXXXXXXXXXXX             GRD+G+LRSEEADNPGG GWRPRE LGGRLG
Sbjct:  200 GREVTRLPXXXXXXXXXXXXXXXEVVSGVSTLVDLPLPNNGDYSQVPADVLMASLALVARLVAAVASCLGVSLPHPLFPAASTRYATISVDSSPRER-SSQYPLCPLSKLAEIGVMGAASAVCKTMGAFDTALDLLRNDIVHLCVEGANVPVDSLWPAEALLLNLWELQQHAMSELRSSSPMVDVPLPMPRDPPEPKSAGFHRLGSRGGASG---SRDRASAKASAQASDGYRRRKTAGMRSRLGLGLGFTTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRDRGELRSEEADNPGGRGWRPREALGGRLG 528          
BLAST of mRNA_E-fasciculatus_F_contig13273.2464.1 vs. uniprot
Match: A0A835Z9D6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9D6_9STRA)

HSP 1 Score: 108 bits (271), Expect = 1.080e-23
Identity = 65/160 (40.62%), Postives = 90/160 (56.25%), Query Frame = 0
Query:   26 VSGVSTLVDLPLPNNGDYSQVPTDVLMASLALVARLVAAVASCLGVSLPHPLFPAASTRYATISVDSSPIERRSSQYPLCPLSKLAEIGVMGAASAVCKTMGAFDTALDLLRNDIVHLCVEGANVPVDSLWPAEALLLNLWELQQHAMSELRSFSPMVDV 185
            V GV  +  LPLP+NG Y+ VP DVL++  A                        +   YA IS  +      S +YPLCP   +AE GV+G  +   ++  AF+TALD+LR+++V LCV+GA VPVD LWPAEALLLNLWEL +H   +L + +  ++ 
Sbjct:  143 VGGVGAIAGLPLPHNGAYAAVPDDVLVSGYA------------------------SGRGYAAISSGAGG-GGASEEYPLCPPHTVAEGGVIGGKAYSSES--AFETALDMLRSNVVTLCVQGAGVPVDRLWPAEALLLNLWELHKHVGQQLAASTAALET 275          
BLAST of mRNA_E-fasciculatus_F_contig13273.2464.1 vs. uniprot
Match: A0A4D9CP94_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CP94_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 8.090e-16
Identity = 65/180 (36.11%), Postives = 96/180 (53.33%), Query Frame = 0
Query:   26 VSGVSTLVDLPLPNNGDYSQV--PTDVLMASLALVARLVAAVASCLGVSLPHPL-FPAASTRYATISVDSSPIER------------RSSQYPLCPLSKLAEIGVMGAASAVCKTMGAFDTALDLLRNDIVHLCVEGANVPVDS--LWPAEALLLNLWELQQHAMSELRSFSPMVDVPLP 188
            ++GVST+V LPLPN G+Y ++  P +V   +L LVARL  ++A  LG+ LPHPL FPA  + YA I+ D+                 RS+     P  +       GA  A  +    F   ++ L+ ++  L V  A V VD+  LW  EA+LLNLW +Q+ A   ++++  + DVPLP
Sbjct:  257 LTGVSTIVGLPLPNAGNYRELGLPDEVCETALYLVARLTWSLAETLGMRLPHPLRFPAGKS-YALIAEDAQRRTEFALSPSFYHGGGRSNASSTAPAYRHPPNRRRGAECAGAEGTDPFSLGVEALQLNVHQLAVSPAGVGVDARELWGKEAVLLNLWAVQRRAAEVVKAYEGLPDVPLP 435          
BLAST of mRNA_E-fasciculatus_F_contig13273.2464.1 vs. uniprot
Match: A0A7S3GZ98_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GZ98_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 2.550e-14
Identity = 65/192 (33.85%), Postives = 88/192 (45.83%), Query Frame = 0
Query:   26 VSGVSTLVDLPLPNNGDYSQVPTDVLMASLALVARLVAAVASCLGVSLPHPLFPAASTRYATISVDSSPIERR---SSQYPLCPLSKLAEIG--------------------------------VMGAASAVCKTM-----------GAFDTALDLLRNDIVHLCVEGANVPVDSLWPAEALLLNLWELQQH 171
            VSG S+++ +PLPN+GDYS  P DV+  + A +A LV A+++ L + LPHPL P  ST    IS       R    +  Y LCP  ++   G                                   + S V K +             F  AL LL+ ++V LCV  A +  +SLWPAEA+LLNL  LQQH
Sbjct:   36 VSGCSSILSVPLPNSGDYSGTPVDVVAMAFAHIALLVDALSATLNIPLPHPLLPFQSTE-CRISAQHDLWARAQIPNLSYSLCPAKQINHEGFKEFDWTSLDQLPTGREAGRNVEPFGTPPHTTTSSSRSVVVKAIVNGDMREYALNSNFSAALVLLQANVVALCVR-AGLSAESLWPAEAMLLNLHLLQQH 225          
BLAST of mRNA_E-fasciculatus_F_contig13273.2464.1 vs. uniprot
Match: A0A8J2SE84_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SE84_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 1.080e-11
Identity = 59/146 (40.41%), Postives = 77/146 (52.74%), Query Frame = 0
Query:   28 GVSTLVDLPLPNNGDY--SQVPTDVLMASLALVARLVAAVASCLGVSLPHPLFPAASTRYATISVDSSPIERRSSQYPLCPLSKLAEIGVMGAASAVCKTMGA--FDTALDLLRNDIVHLCVEGANVPVDSLWPAEALLLNLWELQ 169
            GV+T+  LPLP++      Q+P +V   +LA VAR+VA  A  LGV+LPHPL    S                        L+++A+ G   AA+    T  A  F+TALDLLRND+  LCVEG   P D L PAE +L NL  L+
Sbjct:  157 GVATICGLPLPSDARACREQLPPEVWRCALAAVARVVATAADELGVALPHPLGVGGSA-----------------------LARVAD-GDAAAAARYALTPAAPDFETALDLLRNDVTRLCVEGGVAPGD-LGPAECMLPNLLALR 277          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13273.2464.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LT64_ECTSI2.750e-12277.18Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z9D6_9STRA1.080e-2340.63Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9CP94_9STRA8.090e-1636.11Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S3GZ98_9STRA2.550e-1433.85Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A8J2SE84_9STRA1.080e-1140.41Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018791UV radiation resistance protein/autophagy-related protein 14PFAMPF10186Atg14coord: 29..169
e-value: 2.6E-11
score: 43.2
NoneNo IPR availablePANTHERPTHR15157FAMILY NOT NAMEDcoord: 31..177

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13273contigE-fasciculatus_F_contig13273:5..3354 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13273.2464.1mRNA_E-fasciculatus_F_contig13273.2464.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13273 5..3354 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13273.2464.1 ID=prot_E-fasciculatus_F_contig13273.2464.1|Name=mRNA_E-fasciculatus_F_contig13273.2464.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=327bp
GRGGSRLPPPGGGVAKAGGGGGGEVVSGVSTLVDLPLPNNGDYSQVPTDV
LMASLALVARLVAAVASCLGVSLPHPLFPAASTRYATISVDSSPIERRSS
QYPLCPLSKLAEIGVMGAASAVCKTMGAFDTALDLLRNDIVHLCVEGANV
PVDSLWPAEALLLNLWELQQHAMSELRSFSPMVDVPLPMPRDPPEPKSAG
FHRHGARGGESAPGSSRDRASASASASGGYRRRKTGGMRSRLGLGLGFTS
AAATPPPSPAAEVGTALPGGGTEEDYEFVGGGGGGGGNGVEVDGGGRDQG
DLRSEEADNPGGAGWRPREGLGGRLG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018791UV_resistance/autophagy_Atg14