mRNA_E-fasciculatus_F_contig13261.2458.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig13261.2458.1
Unique NamemRNA_E-fasciculatus_F_contig13261.2458.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig13261.2458.1 vs. uniprot
Match: D8LC21_ECTSI (VPS11_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC21_ECTSI)

HSP 1 Score: 259 bits (662), Expect = 4.200e-78
Identity = 130/132 (98.48%), Postives = 131/132 (99.24%), Query Frame = 1
Query:    1 GLAFILTNRNSLLRLRERDTSSKLELLFRKNLYPMAISLAYASDHDVSEILGIYRMHGDHLYKKGDFEGAMQQFQCTIGQLDPSYVIRRFLDAQRIGLLTSYLEALHDAGQASSEHTTLLLNCHTKLKVLVV 396
            GLAFILTNRNSLLRLRERDTSSKLELLFRKNLYPMAISLAYASDHDVSEILGIYRMHGDHLYKKGDFEGAMQQ+QCTIGQLDPSYVIRRFLDAQRIGLLTSYLEALHDAGQASSEHTTLLLNCHTKLKVL V
Sbjct:  445 GLAFILTNRNSLLRLRERDTSSKLELLFRKNLYPMAISLAYASDHDVSEILGIYRMHGDHLYKKGDFEGAMQQYQCTIGQLDPSYVIRRFLDAQRIGLLTSYLEALHDAGQASSEHTTLLLNCHTKLKVLDV 576          
BLAST of mRNA_E-fasciculatus_F_contig13261.2458.1 vs. uniprot
Match: A0A836CMH8_9STRA (VPS11_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMH8_9STRA)

HSP 1 Score: 194 bits (493), Expect = 6.950e-55
Identity = 92/126 (73.02%), Postives = 115/126 (91.27%), Query Frame = 1
Query:    7 AFILTNRNSLLRLRERDTSSKLELLFRKNLYPMAISLAYASDHDVSEILGIYRMHGDHLYKKGDFEGAMQQFQCTIGQLDPSYVIRRFLDAQRIGLLTSYLEALHDAGQASSEHTTLLLNCHTKLK 384
            A+++T+R +LL LRERDT++KLELL+RKNLYP+AISLAYASD+DV+ ++ +YRM+GDHLYKKGDFEGA+QQ+Q TIG ++PSYVIRR+LDAQRIG LT YLEALH A  AS++HTTLLLNC+TKLK
Sbjct:  377 AYVITSRGALLLLRERDTAAKLELLYRKNLYPVAISLAYASDYDVAAVMDMYRMYGDHLYKKGDFEGAVQQYQHTIGHVEPSYVIRRYLDAQRIGHLTQYLEALHAAQHASADHTTLLLNCYTKLK 502          
BLAST of mRNA_E-fasciculatus_F_contig13261.2458.1 vs. uniprot
Match: A0A7S2V2C6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2C6_9STRA)

HSP 1 Score: 179 bits (453), Expect = 2.760e-51
Identity = 84/127 (66.14%), Postives = 107/127 (84.25%), Query Frame = 1
Query:    4 LAFILTNRNSLLRLRERDTSSKLELLFRKNLYPMAISLAYASDHDVSEILGIYRMHGDHLYKKGDFEGAMQQFQCTIGQLDPSYVIRRFLDAQRIGLLTSYLEALHDAGQASSEHTTLLLNCHTKLK 384
            +A+++T   S LRL E+D +SKL+LLFRKNLYP+AISLAY+S ++V  I+ IYRM+GDHLYKKGD++ AMQQ+  T+G L+PSY+IRRFLDAQRI  LT YLE LHD G A+++HTTLLLNC+TKLK
Sbjct:  219 VAYLVTTHQSFLRLSEKDMASKLDLLFRKNLYPIAISLAYSSSYEVGAIMDIYRMYGDHLYKKGDYDAAMQQYCHTVGYLEPSYIIRRFLDAQRITNLTEYLEKLHDGGHATADHTTLLLNCYTKLK 345          
BLAST of mRNA_E-fasciculatus_F_contig13261.2458.1 vs. uniprot
Match: H3GW62_PHYRM (Vacuolar protein sorting-associated protein 11 homolog n=28 Tax=Peronosporaceae TaxID=4777 RepID=H3GW62_PHYRM)

HSP 1 Score: 171 bits (433), Expect = 8.370e-47
Identity = 80/128 (62.50%), Postives = 110/128 (85.94%), Query Frame = 1
Query:    1 GLAFILTNRNSLLRLRERDTSSKLELLFRKNLYPMAISLAYASDHDVSEILGIYRMHGDHLYKKGDFEGAMQQFQCTIGQLDPSYVIRRFLDAQRIGLLTSYLEALHDAGQASSEHTTLLLNCHTKLK 384
            G  F++++   + RL E+DT+SKLE+LFRKNLY +AISLA++S++DV+ I+ I+RM+GDHLY+KGDF+G+++Q+  TIG ++PSYVIRRFLDAQRI  LT+YLEALH+   A++EHTTLLLNC+TKLK
Sbjct:  344 GAIFVVSSMGHVYRLSEKDTTSKLEILFRKNLYSIAISLAFSSNYDVNSIIDIFRMYGDHLYQKGDFDGSLRQYVRTIGHVEPSYVIRRFLDAQRIHNLTAYLEALHEKAFANAEHTTLLLNCYTKLK 471          
BLAST of mRNA_E-fasciculatus_F_contig13261.2458.1 vs. uniprot
Match: A0A484DY14_BRELC (Vacuolar protein sorting-associated protein 11 homolog n=2 Tax=Peronosporaceae TaxID=4777 RepID=A0A484DY14_BRELC)

HSP 1 Score: 170 bits (430), Expect = 2.220e-46
Identity = 79/128 (61.72%), Postives = 110/128 (85.94%), Query Frame = 1
Query:    1 GLAFILTNRNSLLRLRERDTSSKLELLFRKNLYPMAISLAYASDHDVSEILGIYRMHGDHLYKKGDFEGAMQQFQCTIGQLDPSYVIRRFLDAQRIGLLTSYLEALHDAGQASSEHTTLLLNCHTKLK 384
            G  F++++   + RL E+DT+SKLE+LFRKNLY +AISLA++S++DV+ I+ I+RM+GDHLY+KGD++G+++Q+  TIG ++PSYVIRRFLDAQRI  LT+YLEALH+   A++EHTTLLLNC+TKLK
Sbjct:  399 GAIFVVSSMGHVYRLSEKDTTSKLEILFRKNLYSIAISLAFSSNYDVNSIIDIFRMYGDHLYQKGDYDGSLRQYVRTIGHVEPSYVIRRFLDAQRIHNLTAYLEALHEKAFANAEHTTLLLNCYTKLK 526          
BLAST of mRNA_E-fasciculatus_F_contig13261.2458.1 vs. uniprot
Match: A0A2D4BR03_PYTIN (RING-type domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BR03_PYTIN)

HSP 1 Score: 170 bits (430), Expect = 2.320e-46
Identity = 79/128 (61.72%), Postives = 110/128 (85.94%), Query Frame = 1
Query:    1 GLAFILTNRNSLLRLRERDTSSKLELLFRKNLYPMAISLAYASDHDVSEILGIYRMHGDHLYKKGDFEGAMQQFQCTIGQLDPSYVIRRFLDAQRIGLLTSYLEALHDAGQASSEHTTLLLNCHTKLK 384
            G  F++++   + RL E+DT+SKLE+LFRKNLY +AISLA++S++D++ I+ I+RM+GDHLY+KGDF+G+++Q+  TIG ++PSYVIRRFLDAQRI  LT+YLEALH+   A++EHTTLLLNC+TKLK
Sbjct:  689 GAIFVVSSIGCVYRLTEKDTTSKLEILFRKNLYSIAISLAFSSNYDINSIMDIFRMYGDHLYEKGDFDGSLRQYVRTIGHVEPSYVIRRFLDAQRIHNLTAYLEALHEKAFANAEHTTLLLNCYTKLK 816          
BLAST of mRNA_E-fasciculatus_F_contig13261.2458.1 vs. uniprot
Match: F0WA21_9STRA (Vacuolar protein sorting-associated protein 11 homolog n=2 Tax=Albugo TaxID=65356 RepID=F0WA21_9STRA)

HSP 1 Score: 169 bits (428), Expect = 3.950e-46
Identity = 79/128 (61.72%), Postives = 109/128 (85.16%), Query Frame = 1
Query:    1 GLAFILTNRNSLLRLRERDTSSKLELLFRKNLYPMAISLAYASDHDVSEILGIYRMHGDHLYKKGDFEGAMQQFQCTIGQLDPSYVIRRFLDAQRIGLLTSYLEALHDAGQASSEHTTLLLNCHTKLK 384
            G  F++++   + RL E+DT+SKLE+LFRKNLY +AISLA++S++D++ I+ I+RM+GDHLY+KGD++G+++Q+  TIG L+PSYVIRRFLDAQRI  LT+YLEALH+   A++EHTTLLLNC TKLK
Sbjct:  351 GSIFVVSSAGHVYRLTEKDTTSKLEILFRKNLYSIAISLAFSSNYDINSIVDIFRMYGDHLYQKGDYDGSLRQYTRTIGHLEPSYVIRRFLDAQRIHNLTNYLEALHEKAFANAEHTTLLLNCFTKLK 478          
BLAST of mRNA_E-fasciculatus_F_contig13261.2458.1 vs. uniprot
Match: A0A8K1CGT8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CGT8_PYTOL)

HSP 1 Score: 169 bits (428), Expect = 4.130e-46
Identity = 78/128 (60.94%), Postives = 110/128 (85.94%), Query Frame = 1
Query:    1 GLAFILTNRNSLLRLRERDTSSKLELLFRKNLYPMAISLAYASDHDVSEILGIYRMHGDHLYKKGDFEGAMQQFQCTIGQLDPSYVIRRFLDAQRIGLLTSYLEALHDAGQASSEHTTLLLNCHTKLK 384
            G  F++++   + RL E+DT+SKLE+LFRKNLY +AISLA++S++D++ I+ I+RM+GDHLY+KGD++G+++Q+  TIG ++PSYVIRRFLDAQRI  LT+YLEALH+   A++EHTTLLLNC+TKLK
Sbjct:  386 GAIFVVSSVGCVYRLTEKDTTSKLEILFRKNLYSIAISLAFSSNYDINSIMDIFRMYGDHLYEKGDYDGSLRQYARTIGHVEPSYVIRRFLDAQRIHNLTAYLEALHEKAFANAEHTTLLLNCYTKLK 513          
BLAST of mRNA_E-fasciculatus_F_contig13261.2458.1 vs. uniprot
Match: K3WLY6_GLOUD (Vacuolar protein sorting-associated protein 11 homolog n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WLY6_GLOUD)

HSP 1 Score: 169 bits (428), Expect = 4.140e-46
Identity = 78/128 (60.94%), Postives = 110/128 (85.94%), Query Frame = 1
Query:    1 GLAFILTNRNSLLRLRERDTSSKLELLFRKNLYPMAISLAYASDHDVSEILGIYRMHGDHLYKKGDFEGAMQQFQCTIGQLDPSYVIRRFLDAQRIGLLTSYLEALHDAGQASSEHTTLLLNCHTKLK 384
            G  F++++   + RL E+DT+SKLE+LFRKNLY +AISLA++S++D++ I+ I+RM+GDHLY+KGD++G+++Q+  TIG ++PSYVIRRFLDAQRI  LT+YLEALH+   A++EHTTLLLNC+TKLK
Sbjct:  385 GAIFVVSSVGHVYRLTEKDTTSKLEILFRKNLYSIAISLAFSSNYDINSIMDIFRMYGDHLYQKGDYDGSLRQYARTIGHVEPSYVIRRFLDAQRIHNLTAYLEALHEKAFANAEHTTLLLNCYTKLK 512          
BLAST of mRNA_E-fasciculatus_F_contig13261.2458.1 vs. uniprot
Match: T0Q0R4_SAPDV (Vacuolar protein sorting-associated protein 11 homolog n=4 Tax=Saprolegniaceae TaxID=4764 RepID=T0Q0R4_SAPDV)

HSP 1 Score: 165 bits (418), Expect = 9.170e-45
Identity = 78/128 (60.94%), Postives = 106/128 (82.81%), Query Frame = 1
Query:    1 GLAFILTNRNSLLRLRERDTSSKLELLFRKNLYPMAISLAYASDHDVSEILGIYRMHGDHLYKKGDFEGAMQQFQCTIGQLDPSYVIRRFLDAQRIGLLTSYLEALHDAGQASSEHTTLLLNCHTKLK 384
            G  F++T+  S+ RL E+DT+SKL +LF KNLYP+AISLA++S++D+S I+ I+RM+GD LY KGD++G+++Q+  TIG ++PSYVIRRFLDAQRI  LT+YLE LH    A++EHTTLLLNC+TKLK
Sbjct:  385 GAVFVVTSFGSVYRLSEKDTASKLSILFDKNLYPIAISLAFSSNYDLSSIMDIFRMYGDFLYNKGDYDGSLRQYARTIGHVEPSYVIRRFLDAQRIHNLTTYLETLHTKAFATAEHTTLLLNCYTKLK 512          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13261.2458.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC21_ECTSI4.200e-7898.48VPS11_C domain-containing protein n=2 Tax=Ectocarp... [more]
A0A836CMH8_9STRA6.950e-5573.02VPS11_C domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S2V2C6_9STRA2.760e-5166.14Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
H3GW62_PHYRM8.370e-4762.50Vacuolar protein sorting-associated protein 11 hom... [more]
A0A484DY14_BRELC2.220e-4661.72Vacuolar protein sorting-associated protein 11 hom... [more]
A0A2D4BR03_PYTIN2.320e-4661.72RING-type domain-containing protein n=1 Tax=Pythiu... [more]
F0WA21_9STRA3.950e-4661.72Vacuolar protein sorting-associated protein 11 hom... [more]
A0A8K1CGT8_PYTOL4.130e-4660.94Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3WLY6_GLOUD4.140e-4660.94Vacuolar protein sorting-associated protein 11 hom... [more]
T0Q0R4_SAPDV9.170e-4560.94Vacuolar protein sorting-associated protein 11 hom... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13261contigE-fasciculatus_F_contig13261:312..1348 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score260.8
Seed ortholog evalue3.6e-67
Seed eggNOG ortholog2880.D8LC21
Preferred nameVPS11
KEGG koko:K20179
KEGG Pathwayko04138,map04138
GOsGO:0000149,GO:0000323,GO:0000325,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005768,GO:0005769,GO:0005770,GO:0005773,GO:0005774,GO:0005856,GO:0005884,GO:0006810,GO:0006887,GO:0006904,GO:0006906,GO:0006996,GO:0007032,GO:0007033,GO:0007034,GO:0007040,GO:0007041,GO:0008150,GO:0008333,GO:0009705,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010256,GO:0010604,GO:0012505,GO:0015629,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0019222,GO:0019904,GO:0019905,GO:0022406,GO:0030139,GO:0030674,GO:0030897,GO:0031090,GO:0031323,GO:0031325,GO:0031329,GO:0031331,GO:0031338,GO:0031410,GO:0031982,GO:0032268,GO:0032270,GO:0032386,GO:0032388,GO:0032879,GO:0032940,GO:0032991,GO:0033043,GO:0033263,GO:0034058,GO:0035542,GO:0042144,GO:0042176,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043254,GO:0044087,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0045732,GO:0046903,GO:0046907,GO:0048278,GO:0048284,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051049,GO:0051050,GO:0051128,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051640,GO:0051641,GO:0051649,GO:0060090,GO:0060255,GO:0060341,GO:0060627,GO:0061024,GO:0061025,GO:0065007,GO:0071840,GO:0080090,GO:0080171,GO:0090174,GO:0097576,GO:0097708,GO:0098588,GO:0098796,GO:0098805,GO:0099023,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0140029,GO:0140056,GO:1901998,GO:1902115,GO:1903362,GO:1903364,GO:1903649,GO:1903651,GO:2000641,GO:2000643
EggNOG free text desc.regulation of SNARE complex assembly
EggNOG OGsKOG2114@1,KOG2114@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Hectar predicted targeting categoryother localisation
Exons2
Model size405
Cds size405
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927829.5131118-CDS-E-fasciculatus_F_contig13261:311..5531622927829.5131118-CDS-E-fasciculatus_F_contig13261:311..553Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13261 312..553 -
1695995712.668451-CDS-E-fasciculatus_F_contig13261:311..5531695995712.668451-CDS-E-fasciculatus_F_contig13261:311..553Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13261 312..553 -
1622927829.5257363-CDS-E-fasciculatus_F_contig13261:1185..13481622927829.5257363-CDS-E-fasciculatus_F_contig13261:1185..1348Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13261 1186..1348 -
1695995712.6849332-CDS-E-fasciculatus_F_contig13261:1185..13481695995712.6849332-CDS-E-fasciculatus_F_contig13261:1185..1348Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13261 1186..1348 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13261.2458.1prot_E-fasciculatus_F_contig13261.2458.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig13261 312..1348 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig13261.2458.1

>prot_E-fasciculatus_F_contig13261.2458.1 ID=prot_E-fasciculatus_F_contig13261.2458.1|Name=mRNA_E-fasciculatus_F_contig13261.2458.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=135bp
GLAFILTNRNSLLRLRERDTSSKLELLFRKNLYPMAISLAYASDHDVSEI
LGIYRMHGDHLYKKGDFEGAMQQFQCTIGQLDPSYVIRRFLDAQRIGLLT
SYLEALHDAGQASSEHTTLLLNCHTKLKVLVVGS*
back to top

mRNA from alignment at E-fasciculatus_F_contig13261:312..1348-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig13261.2458.1 ID=mRNA_E-fasciculatus_F_contig13261.2458.1|Name=mRNA_E-fasciculatus_F_contig13261.2458.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1037bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13261:312..1348- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GGCTTGGCCTTCATCCTCACGAACAGGAACTCGTTGCTCAGGCTTCGAGA GCGGGACACGTCGTCCAAGCTCGAGCTCCTCTTCAGGAAGAACCTCTACC CGATGGCCATCTCGCTGGCTTACGCCAGCGACCACGACGTGTCGGAGATT CTTGGGATTTATCGTGAGTTTTGGTTGCATGTAGGGGGGGGGGGACTCGT GCGTTGCTTAGCCGTAATTGTGATTTGTTACTTGCCGTGTTTTATGTTTT ATGATTTGCAGATTCTGGGGATTTTATCGTGAGTTTTGGTTGGATTTAGG AGGGGGAGACTCGTGCGTTCCTTGCCGAATTTATTTTTTCATTGCAATGT TTGTCCTTTGTTGTTGGCACGAAAGTGTTTGCTCCCGGATAACACCTTAT CTTTTGCATCTGACGATGCCCCTTGCTTTACGGGCGTTTTCTGTGCTTGT TGTTGTCACTGGTGATCGTACAATGAAAACCGTGTTGGACGCAACGAACA AATGCGAGACCCCACGTGTTGATGCGGGCAATCCTTACACCCAAATCTAT GCACTCGCAACCCAGGGTCATGCGTCGAGCCTCTCAATACAACATACCTC GTAGGACATCGGCCTGACCCCAGGCATAGCATAGAGCTTACATCAGCCCC AACCAGGGATACATGCAGGCCGCATACATGAAACCCCGACCCCAGCCCAC TGAGGCATCCGCAGATACATTCTCGTCTCTGCAAGAATACGACCATGGGG GCGTCTGACCCGGTGGTACACCTATCCCCACACCTGCGACCTTAGGCATG CACGGCGACCACCTCTACAAGAAGGGAGACTTCGAGGGCGCGATGCAGCA GTTCCAGTGCACCATCGGGCAGCTCGACCCCAGCTACGTCATCCGCCGCT TCCTCGACGCGCAGAGGATAGGGCTGCTCACGTCTTACCTCGAGGCGCTC CACGACGCCGGCCAGGCGTCGTCGGAGCACACCACCCTGCTCCTCAACTG CCACACCAAGCTCAAGGTGCTGGTGGTGGGATCATGA
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13261:312..1348-

>mRNA_E-fasciculatus_F_contig13261.2458.1 ID=mRNA_E-fasciculatus_F_contig13261.2458.1|Name=mRNA_E-fasciculatus_F_contig13261.2458.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=810bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13261:312..1348- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GGCTTGGCCTTCATCCTCACGAACAGGAACTCGTTGCTCAGGCTTCGAGA
GCGGGACACGTCGTCCAAGCTCGAGCTCCTCTTCAGGAAGAACCTCTACC
CGATGGCCATCTCGCTGGCTTACGCCAGCGACCACGACGTGTCGGAGATT
CTTGGGATTTATCGGCTTGGCCTTCATCCTCACGAACAGGAACTCGTTGC
TCAGGCTTCGAGAGCGGGACACGTCGTCCAAGCTCGAGCTCCTCTTCAGG
AAGAACCTCTACCCGATGGCCATCTCGCTGGCTTACGCCAGCGACCACGA
CGTGTCGGAGATTCTTGGGATTTATCGCATGCACGGCGACCACCTCTACA
AGAAGGGAGACTTCGAGGGCGCGATGCAGCAGTTCCAGTGCACCATCGGG
CAGCTCGACCCCAGCTACGTCATCCGCCGCTTCCTCGACGCGCAGAGGAT
AGGGCTGCTCACGTCTTACCTCGAGGCGCTCCACGACGCCGGCCAGGCGT
CGTCGGAGCACACCACCCTGCTCCTCAACTGCCACACCAAGCTCAAGGTG
CTGGTGGTGGGATCATGAGCATGCACGGCGACCACCTCTACAAGAAGGGA
GACTTCGAGGGCGCGATGCAGCAGTTCCAGTGCACCATCGGGCAGCTCGA
CCCCAGCTACGTCATCCGCCGCTTCCTCGACGCGCAGAGGATAGGGCTGC
TCACGTCTTACCTCGAGGCGCTCCACGACGCCGGCCAGGCGTCGTCGGAG
CACACCACCCTGCTCCTCAACTGCCACACCAAGCTCAAGGTGCTGGTGGT
GGGATCATGA
back to top