mRNA_E-fasciculatus_F_contig13261.2458.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13261.2458.1 vs. uniprot
Match: D8LC21_ECTSI (VPS11_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC21_ECTSI) HSP 1 Score: 259 bits (662), Expect = 4.200e-78 Identity = 130/132 (98.48%), Postives = 131/132 (99.24%), Query Frame = 1
Query: 1 GLAFILTNRNSLLRLRERDTSSKLELLFRKNLYPMAISLAYASDHDVSEILGIYRMHGDHLYKKGDFEGAMQQFQCTIGQLDPSYVIRRFLDAQRIGLLTSYLEALHDAGQASSEHTTLLLNCHTKLKVLVV 396
GLAFILTNRNSLLRLRERDTSSKLELLFRKNLYPMAISLAYASDHDVSEILGIYRMHGDHLYKKGDFEGAMQQ+QCTIGQLDPSYVIRRFLDAQRIGLLTSYLEALHDAGQASSEHTTLLLNCHTKLKVL V
Sbjct: 445 GLAFILTNRNSLLRLRERDTSSKLELLFRKNLYPMAISLAYASDHDVSEILGIYRMHGDHLYKKGDFEGAMQQYQCTIGQLDPSYVIRRFLDAQRIGLLTSYLEALHDAGQASSEHTTLLLNCHTKLKVLDV 576
BLAST of mRNA_E-fasciculatus_F_contig13261.2458.1 vs. uniprot
Match: A0A836CMH8_9STRA (VPS11_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMH8_9STRA) HSP 1 Score: 194 bits (493), Expect = 6.950e-55 Identity = 92/126 (73.02%), Postives = 115/126 (91.27%), Query Frame = 1
Query: 7 AFILTNRNSLLRLRERDTSSKLELLFRKNLYPMAISLAYASDHDVSEILGIYRMHGDHLYKKGDFEGAMQQFQCTIGQLDPSYVIRRFLDAQRIGLLTSYLEALHDAGQASSEHTTLLLNCHTKLK 384
A+++T+R +LL LRERDT++KLELL+RKNLYP+AISLAYASD+DV+ ++ +YRM+GDHLYKKGDFEGA+QQ+Q TIG ++PSYVIRR+LDAQRIG LT YLEALH A AS++HTTLLLNC+TKLK
Sbjct: 377 AYVITSRGALLLLRERDTAAKLELLYRKNLYPVAISLAYASDYDVAAVMDMYRMYGDHLYKKGDFEGAVQQYQHTIGHVEPSYVIRRYLDAQRIGHLTQYLEALHAAQHASADHTTLLLNCYTKLK 502
BLAST of mRNA_E-fasciculatus_F_contig13261.2458.1 vs. uniprot
Match: A0A7S2V2C6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2C6_9STRA) HSP 1 Score: 179 bits (453), Expect = 2.760e-51 Identity = 84/127 (66.14%), Postives = 107/127 (84.25%), Query Frame = 1
Query: 4 LAFILTNRNSLLRLRERDTSSKLELLFRKNLYPMAISLAYASDHDVSEILGIYRMHGDHLYKKGDFEGAMQQFQCTIGQLDPSYVIRRFLDAQRIGLLTSYLEALHDAGQASSEHTTLLLNCHTKLK 384
+A+++T S LRL E+D +SKL+LLFRKNLYP+AISLAY+S ++V I+ IYRM+GDHLYKKGD++ AMQQ+ T+G L+PSY+IRRFLDAQRI LT YLE LHD G A+++HTTLLLNC+TKLK
Sbjct: 219 VAYLVTTHQSFLRLSEKDMASKLDLLFRKNLYPIAISLAYSSSYEVGAIMDIYRMYGDHLYKKGDYDAAMQQYCHTVGYLEPSYIIRRFLDAQRITNLTEYLEKLHDGGHATADHTTLLLNCYTKLK 345
BLAST of mRNA_E-fasciculatus_F_contig13261.2458.1 vs. uniprot
Match: H3GW62_PHYRM (Vacuolar protein sorting-associated protein 11 homolog n=28 Tax=Peronosporaceae TaxID=4777 RepID=H3GW62_PHYRM) HSP 1 Score: 171 bits (433), Expect = 8.370e-47 Identity = 80/128 (62.50%), Postives = 110/128 (85.94%), Query Frame = 1
Query: 1 GLAFILTNRNSLLRLRERDTSSKLELLFRKNLYPMAISLAYASDHDVSEILGIYRMHGDHLYKKGDFEGAMQQFQCTIGQLDPSYVIRRFLDAQRIGLLTSYLEALHDAGQASSEHTTLLLNCHTKLK 384
G F++++ + RL E+DT+SKLE+LFRKNLY +AISLA++S++DV+ I+ I+RM+GDHLY+KGDF+G+++Q+ TIG ++PSYVIRRFLDAQRI LT+YLEALH+ A++EHTTLLLNC+TKLK
Sbjct: 344 GAIFVVSSMGHVYRLSEKDTTSKLEILFRKNLYSIAISLAFSSNYDVNSIIDIFRMYGDHLYQKGDFDGSLRQYVRTIGHVEPSYVIRRFLDAQRIHNLTAYLEALHEKAFANAEHTTLLLNCYTKLK 471
BLAST of mRNA_E-fasciculatus_F_contig13261.2458.1 vs. uniprot
Match: A0A484DY14_BRELC (Vacuolar protein sorting-associated protein 11 homolog n=2 Tax=Peronosporaceae TaxID=4777 RepID=A0A484DY14_BRELC) HSP 1 Score: 170 bits (430), Expect = 2.220e-46 Identity = 79/128 (61.72%), Postives = 110/128 (85.94%), Query Frame = 1
Query: 1 GLAFILTNRNSLLRLRERDTSSKLELLFRKNLYPMAISLAYASDHDVSEILGIYRMHGDHLYKKGDFEGAMQQFQCTIGQLDPSYVIRRFLDAQRIGLLTSYLEALHDAGQASSEHTTLLLNCHTKLK 384
G F++++ + RL E+DT+SKLE+LFRKNLY +AISLA++S++DV+ I+ I+RM+GDHLY+KGD++G+++Q+ TIG ++PSYVIRRFLDAQRI LT+YLEALH+ A++EHTTLLLNC+TKLK
Sbjct: 399 GAIFVVSSMGHVYRLSEKDTTSKLEILFRKNLYSIAISLAFSSNYDVNSIIDIFRMYGDHLYQKGDYDGSLRQYVRTIGHVEPSYVIRRFLDAQRIHNLTAYLEALHEKAFANAEHTTLLLNCYTKLK 526
BLAST of mRNA_E-fasciculatus_F_contig13261.2458.1 vs. uniprot
Match: A0A2D4BR03_PYTIN (RING-type domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BR03_PYTIN) HSP 1 Score: 170 bits (430), Expect = 2.320e-46 Identity = 79/128 (61.72%), Postives = 110/128 (85.94%), Query Frame = 1
Query: 1 GLAFILTNRNSLLRLRERDTSSKLELLFRKNLYPMAISLAYASDHDVSEILGIYRMHGDHLYKKGDFEGAMQQFQCTIGQLDPSYVIRRFLDAQRIGLLTSYLEALHDAGQASSEHTTLLLNCHTKLK 384
G F++++ + RL E+DT+SKLE+LFRKNLY +AISLA++S++D++ I+ I+RM+GDHLY+KGDF+G+++Q+ TIG ++PSYVIRRFLDAQRI LT+YLEALH+ A++EHTTLLLNC+TKLK
Sbjct: 689 GAIFVVSSIGCVYRLTEKDTTSKLEILFRKNLYSIAISLAFSSNYDINSIMDIFRMYGDHLYEKGDFDGSLRQYVRTIGHVEPSYVIRRFLDAQRIHNLTAYLEALHEKAFANAEHTTLLLNCYTKLK 816
BLAST of mRNA_E-fasciculatus_F_contig13261.2458.1 vs. uniprot
Match: F0WA21_9STRA (Vacuolar protein sorting-associated protein 11 homolog n=2 Tax=Albugo TaxID=65356 RepID=F0WA21_9STRA) HSP 1 Score: 169 bits (428), Expect = 3.950e-46 Identity = 79/128 (61.72%), Postives = 109/128 (85.16%), Query Frame = 1
Query: 1 GLAFILTNRNSLLRLRERDTSSKLELLFRKNLYPMAISLAYASDHDVSEILGIYRMHGDHLYKKGDFEGAMQQFQCTIGQLDPSYVIRRFLDAQRIGLLTSYLEALHDAGQASSEHTTLLLNCHTKLK 384
G F++++ + RL E+DT+SKLE+LFRKNLY +AISLA++S++D++ I+ I+RM+GDHLY+KGD++G+++Q+ TIG L+PSYVIRRFLDAQRI LT+YLEALH+ A++EHTTLLLNC TKLK
Sbjct: 351 GSIFVVSSAGHVYRLTEKDTTSKLEILFRKNLYSIAISLAFSSNYDINSIVDIFRMYGDHLYQKGDYDGSLRQYTRTIGHLEPSYVIRRFLDAQRIHNLTNYLEALHEKAFANAEHTTLLLNCFTKLK 478
BLAST of mRNA_E-fasciculatus_F_contig13261.2458.1 vs. uniprot
Match: A0A8K1CGT8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CGT8_PYTOL) HSP 1 Score: 169 bits (428), Expect = 4.130e-46 Identity = 78/128 (60.94%), Postives = 110/128 (85.94%), Query Frame = 1
Query: 1 GLAFILTNRNSLLRLRERDTSSKLELLFRKNLYPMAISLAYASDHDVSEILGIYRMHGDHLYKKGDFEGAMQQFQCTIGQLDPSYVIRRFLDAQRIGLLTSYLEALHDAGQASSEHTTLLLNCHTKLK 384
G F++++ + RL E+DT+SKLE+LFRKNLY +AISLA++S++D++ I+ I+RM+GDHLY+KGD++G+++Q+ TIG ++PSYVIRRFLDAQRI LT+YLEALH+ A++EHTTLLLNC+TKLK
Sbjct: 386 GAIFVVSSVGCVYRLTEKDTTSKLEILFRKNLYSIAISLAFSSNYDINSIMDIFRMYGDHLYEKGDYDGSLRQYARTIGHVEPSYVIRRFLDAQRIHNLTAYLEALHEKAFANAEHTTLLLNCYTKLK 513
BLAST of mRNA_E-fasciculatus_F_contig13261.2458.1 vs. uniprot
Match: K3WLY6_GLOUD (Vacuolar protein sorting-associated protein 11 homolog n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WLY6_GLOUD) HSP 1 Score: 169 bits (428), Expect = 4.140e-46 Identity = 78/128 (60.94%), Postives = 110/128 (85.94%), Query Frame = 1
Query: 1 GLAFILTNRNSLLRLRERDTSSKLELLFRKNLYPMAISLAYASDHDVSEILGIYRMHGDHLYKKGDFEGAMQQFQCTIGQLDPSYVIRRFLDAQRIGLLTSYLEALHDAGQASSEHTTLLLNCHTKLK 384
G F++++ + RL E+DT+SKLE+LFRKNLY +AISLA++S++D++ I+ I+RM+GDHLY+KGD++G+++Q+ TIG ++PSYVIRRFLDAQRI LT+YLEALH+ A++EHTTLLLNC+TKLK
Sbjct: 385 GAIFVVSSVGHVYRLTEKDTTSKLEILFRKNLYSIAISLAFSSNYDINSIMDIFRMYGDHLYQKGDYDGSLRQYARTIGHVEPSYVIRRFLDAQRIHNLTAYLEALHEKAFANAEHTTLLLNCYTKLK 512
BLAST of mRNA_E-fasciculatus_F_contig13261.2458.1 vs. uniprot
Match: T0Q0R4_SAPDV (Vacuolar protein sorting-associated protein 11 homolog n=4 Tax=Saprolegniaceae TaxID=4764 RepID=T0Q0R4_SAPDV) HSP 1 Score: 165 bits (418), Expect = 9.170e-45 Identity = 78/128 (60.94%), Postives = 106/128 (82.81%), Query Frame = 1
Query: 1 GLAFILTNRNSLLRLRERDTSSKLELLFRKNLYPMAISLAYASDHDVSEILGIYRMHGDHLYKKGDFEGAMQQFQCTIGQLDPSYVIRRFLDAQRIGLLTSYLEALHDAGQASSEHTTLLLNCHTKLK 384
G F++T+ S+ RL E+DT+SKL +LF KNLYP+AISLA++S++D+S I+ I+RM+GD LY KGD++G+++Q+ TIG ++PSYVIRRFLDAQRI LT+YLE LH A++EHTTLLLNC+TKLK
Sbjct: 385 GAVFVVTSFGSVYRLSEKDTASKLSILFDKNLYPIAISLAFSSNYDLSSIMDIFRMYGDFLYNKGDYDGSLRQYARTIGHVEPSYVIRRFLDAQRIHNLTTYLETLHTKAFATAEHTTLLLNCYTKLK 512 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13261.2458.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13261.2458.1 >prot_E-fasciculatus_F_contig13261.2458.1 ID=prot_E-fasciculatus_F_contig13261.2458.1|Name=mRNA_E-fasciculatus_F_contig13261.2458.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=135bp GLAFILTNRNSLLRLRERDTSSKLELLFRKNLYPMAISLAYASDHDVSEIback to top mRNA from alignment at E-fasciculatus_F_contig13261:312..1348- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13261.2458.1 ID=mRNA_E-fasciculatus_F_contig13261.2458.1|Name=mRNA_E-fasciculatus_F_contig13261.2458.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1037bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13261:312..1348- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13261:312..1348- >mRNA_E-fasciculatus_F_contig13261.2458.1 ID=mRNA_E-fasciculatus_F_contig13261.2458.1|Name=mRNA_E-fasciculatus_F_contig13261.2458.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=810bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13261:312..1348- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |