mRNA_E-fasciculatus_F_contig13260.2457.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13260.2457.1 vs. uniprot
Match: D7FLE6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLE6_ECTSI) HSP 1 Score: 265 bits (677), Expect = 6.820e-83 Identity = 136/140 (97.14%), Postives = 138/140 (98.57%), Query Frame = 1
Query: 91 MSARSGHSGPTTVARGMPGATGDGNATKAMDNLRAEIKLLHWHKLANEAALKAALLKTKKIKARGGGTSRPVPAMTTLSMPTDERAAWMQQVIEEEQSKPLQVSKDFMCKYEKQEEETEGRLDTEVAAHIRSLRNLRHQV 510
MSARSGHSGPT VARGMP ATGDGNATKAMDNLRAEIKLLHWHKLAN+AALKAALLKTKKIKARGGGTSRPVPAMTTLSMPTDERAAWMQQVIEEEQSKPLQVSKDFMCKYEKQEEETEGRLDTEVAAHIRSLRNLRHQ+
Sbjct: 1 MSARSGHSGPTNVARGMPSATGDGNATKAMDNLRAEIKLLHWHKLANQAALKAALLKTKKIKARGGGTSRPVPAMTTLSMPTDERAAWMQQVIEEEQSKPLQVSKDFMCKYEKQEEETEGRLDTEVAAHIRSLRNLRHQI 140
BLAST of mRNA_E-fasciculatus_F_contig13260.2457.1 vs. uniprot
Match: A0A836CKD1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKD1_9STRA) HSP 1 Score: 118 bits (296), Expect = 2.800e-28 Identity = 61/106 (57.55%), Postives = 76/106 (71.70%), Query Frame = 1
Query: 199 IKLLHWHKLANEAALKAALLKTKKIKARGGGTS--RPVPAMTTLSMPTDERAAWMQQVIEEEQSKPLQVSKDFMCKYEKQEEETEGRLDTEVAAHIRSLRNLRHQV 510
+KLLHWHKLANEAALKAA+LKT+K K GG +P P + MP +E+AAW+QQ+IEEE+ KPLQV KDF+ YEK+E+E RLD E+ I SLR LR +
Sbjct: 1 MKLLHWHKLANEAALKAAILKTRKAKQGGGAGEVLKPAPPASANHMPMEEKAAWVQQIIEEEKGKPLQVGKDFVMDYEKREKEQSARLDREIERQIASLRKLREHI 106
BLAST of mRNA_E-fasciculatus_F_contig13260.2457.1 vs. uniprot
Match: A0A7S2FVP2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FVP2_9STRA) HSP 1 Score: 113 bits (282), Expect = 1.870e-27 Identity = 78/168 (46.43%), Postives = 95/168 (56.55%), Query Frame = 1
Query: 10 WVSEFEAFQWSKGQRNNEGTPHAGGAPMSARSGHSGPTTVARGMPGATGDGNATKAMDNLRAEIKLLHWHKLANEAALKAALLKTKKIKARGGGTSRPVPAMTTLSMPTDERAAWMQQVIEEEQSKPLQVSKDFMCKYEKQEEETEGRLDTEVAAHIRSLRNLRHQVR 513
W S+F+AFQ S GG P + P TV M+ L AE+KLL+WHKLANEAALKAAL++TKK+ R S P ++ ++AAWMQQVIEEEQ KPLQVSKDF+ KYE E + E RLD EV HI LR LR +V+
Sbjct: 19 WASDFDAFQPS------------GGLPGA-------PPTVDTLQKSQVMARQPESTMEELEAEMKLLNWHKLANEAALKAALIRTKKL--RKMDKSPPSKSL-------QDKAAWMQQVIEEEQRKPLQVSKDFIQKYETDERKEEERLDAEVQRHIDVLRKLRGKVK 158
BLAST of mRNA_E-fasciculatus_F_contig13260.2457.1 vs. uniprot
Match: A0A7S4D705_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D705_HETAK) HSP 1 Score: 107 bits (268), Expect = 2.270e-26 Identity = 58/126 (46.03%), Postives = 84/126 (66.67%), Query Frame = 1
Query: 133 RGMPGATGDGNATKAMDNLRAEIKLLHWHKLANEAALKAALLKTKKIKARGGGTSRPVPAMTTLSMPTDERAAWMQQVIEEEQSKPLQVSKDFMCKYEKQEEETEGRLDTEVAAHIRSLRNLRHQV 510
RG + + AM++L+AE+KLL+WHKLANEAALKAAL++TK ++ GG + + L +ERA WMQQVI+EE +KPLQV K+++ ++E++E + RL EV+ HI +L LR V
Sbjct: 32 RGSVRSPSPNQRSSAMEDLQAEMKLLNWHKLANEAALKAALIRTKNLRKARGGVEGTLKGRSNL----EERAGWMQQVIDEEHTKPLQVDKEWVAQHERREAQQAARLQDEVSLHINTLAALRQSV 153
BLAST of mRNA_E-fasciculatus_F_contig13260.2457.1 vs. uniprot
Match: A0A8J2SWN2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SWN2_9STRA) HSP 1 Score: 112 bits (281), Expect = 2.340e-26 Identity = 62/110 (56.36%), Postives = 79/110 (71.82%), Query Frame = 1
Query: 181 DNLRAEIKLLHWHKLANEAALKAALLKTKKIKARGGGTSRPVPAMTTLSMPTDERAAWMQQVIEEEQSKPLQVSKDFMCKYEKQEEETEGRLDTEVAAHIRSLRNLRHQV 510
+ ++AE+KLLHWHKLAN+AALKAALLKTK +KA+ RPV + +A WMQ+VIEEEQ+KPLQV+KDF+ +Y++ E E RLD EVA HI LR LR Q+
Sbjct: 6 EKIKAEMKLLHWHKLANDAALKAALLKTKTMKAKDA--KRPVGVENVKA-----KAGWMQRVIEEEQAKPLQVTKDFVLEYQENERREEERLDAEVARHIECLRKLRVQI 108
BLAST of mRNA_E-fasciculatus_F_contig13260.2457.1 vs. uniprot
Match: A0A7S2SV79_9STRA (Hypothetical protein (Fragment) n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV79_9STRA) HSP 1 Score: 107 bits (267), Expect = 3.980e-25 Identity = 63/113 (55.75%), Postives = 82/113 (72.57%), Query Frame = 1
Query: 175 AMDNLRAEIKLLHWHKLANEAALKAALLKTKKIKARGGGTSRPV-PAMTTLSMPTDERAAWMQQVIEEEQSKPLQVSKDFMCKYEKQEEETEGRLDTEVAAHIRSLRNLRHQV 510
++++L+AE+KLL+WHK+ANEAALKAAL++TKK+K PV PA L E+A+WMQQVIEEEQ KPLQVSKD++ +YE QE+ E RLD EV HI L L+ +V
Sbjct: 74 SLEDLQAEMKLLNWHKMANEAALKAALIRTKKLKKI---EKAPVGPAAQNLQ----EKASWMQQVIEEEQRKPLQVSKDYVTQYEAQEKLEEERLDEEVRRHISVLSRLKEKV 179
BLAST of mRNA_E-fasciculatus_F_contig13260.2457.1 vs. uniprot
Match: A0A5A8CZU6_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CZU6_CAFRO) HSP 1 Score: 94.7 bits (234), Expect = 6.520e-21 Identity = 51/116 (43.97%), Postives = 77/116 (66.38%), Query Frame = 1
Query: 163 NATKAMDNLRAEIKLLHWHKLANEAALKAALLKTKKIKARGGGTSRPVPAMTTLSMPTDERAAWMQQVIEEEQSKPLQVSKDFMCKYEKQEEETEGRLDTEVAAHIRSLRNLRHQV 510
N ++ L E+KLLHWHKLANE+ALKAA+++TK++K R S PA ERAAW+Q ++ +EQ+KPL+V F+ + ++EEE + RL+ EVA HI +L+ L+ ++
Sbjct: 41 NVPTSIRQLEDELKLLHWHKLANESALKAAIIRTKRVKGRDRDRSAARPAGDP------ERAAWLQAIVADEQAKPLEVDDAFLEAFRQREEEKQRRLEAEVAQHIDTLQMLKGRL 150
BLAST of mRNA_E-fasciculatus_F_contig13260.2457.1 vs. uniprot
Match: A0A485LSC6_9STRA (Aste57867_23465 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LSC6_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 9.590e-21 Identity = 55/119 (46.22%), Postives = 77/119 (64.71%), Query Frame = 1
Query: 145 GATGDGNATKAMDNLRAEIKLLHWHKLANEAALKAALLKTKKIKARGGGTSRPVPAMTTLSMPTDERAAWMQQVIEEEQSKPLQVSKDFMCKYEKQEEETEGRLDTEVAAHIRSLRNLR 501
G GDG +T ++ ++ E+KLL+WHKLANEAALKAAL+KTKK+K S + A +ER +QQ+ EEE KPL+V+ +F+ KYE +E E RL+ +VA HI L+ L+
Sbjct: 45 GKKGDGGSTSQLEEIKQEMKLLNWHKLANEAALKAALIKTKKLKREDARQSSLLDA--------EERMERLQQIEEEENMKPLEVTAEFIRKYEDEERREERRLEADVARHISCLKKLK 155
BLAST of mRNA_E-fasciculatus_F_contig13260.2457.1 vs. uniprot
Match: A0A5A8D0A2_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D0A2_CAFRO) HSP 1 Score: 94.7 bits (234), Expect = 2.980e-20 Identity = 51/116 (43.97%), Postives = 77/116 (66.38%), Query Frame = 1
Query: 163 NATKAMDNLRAEIKLLHWHKLANEAALKAALLKTKKIKARGGGTSRPVPAMTTLSMPTDERAAWMQQVIEEEQSKPLQVSKDFMCKYEKQEEETEGRLDTEVAAHIRSLRNLRHQV 510
N ++ L E+KLLHWHKLANE+ALKAA+++TK++K R S PA ERAAW+Q ++ +EQ+KPL+V F+ + ++EEE + RL+ EVA HI +L+ L+ ++
Sbjct: 41 NVPTSIRQLEDELKLLHWHKLANESALKAAIIRTKRVKGRDRDRSAARPAGDP------ERAAWLQAIVADEQAKPLEVDDAFLEAFRQREEEKQRRLEAEVAQHIDTLQMLKGRL 150
BLAST of mRNA_E-fasciculatus_F_contig13260.2457.1 vs. uniprot
Match: H3GDU8_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GDU8_PHYRM) HSP 1 Score: 96.7 bits (239), Expect = 4.020e-20 Identity = 71/178 (39.89%), Postives = 97/178 (54.49%), Query Frame = 1
Query: 1 HDGWVSEFEAFQWSKGQRNN--EGTPHAGGAPMSARSGHSGPT----TVARGMPGATGDGNAT--KAMDNLRAEIKLLHWHKLANEAALKAALLKTKKIKARGGGTSRPVPAMTTLSMPTDERAAWMQQVIEEEQSKPLQVSKDFMCKYEKQEEETEGRLDTEVAAHIRSLRNLRHQV 510
+ GWV E + +Q GQ + E T +G A +A S SG T T + MP +A + L+ E+KLL+WHKLANEAALKAA++KT KIK S+ A T +ER QQ+IEEEQ KPLQV+ +F E + + E +LD +V HI+ LR L+ +
Sbjct: 7 YSGWVRELDEYQSGDGQYDERLEATSDSGKAAQAALSSRSGATAATNTSRKVMPRGASTASAAPISQAEELQQEMKLLNWHKLANEAALKAAIIKTNKIKQED---SQFASAFTQGER--EEREQRAQQIIEEEQLKPLQVNTEFFRNLEAKGQRDEAKLDDDVQRHIQHLRKLKESM 179 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13260.2457.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13260.2457.1 >prot_E-fasciculatus_F_contig13260.2457.1 ID=prot_E-fasciculatus_F_contig13260.2457.1|Name=mRNA_E-fasciculatus_F_contig13260.2457.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=172bp HDGWVSEFEAFQWSKGQRNNEGTPHAGGAPMSARSGHSGPTTVARGMPGAback to top mRNA from alignment at E-fasciculatus_F_contig13260:341..856- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13260.2457.1 ID=mRNA_E-fasciculatus_F_contig13260.2457.1|Name=mRNA_E-fasciculatus_F_contig13260.2457.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=516bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13260:341..856- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13260:341..856- >mRNA_E-fasciculatus_F_contig13260.2457.1 ID=mRNA_E-fasciculatus_F_contig13260.2457.1|Name=mRNA_E-fasciculatus_F_contig13260.2457.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1032bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13260:341..856- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |