mRNA_E-fasciculatus_F_contig1322.2430.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1322.2430.1 vs. uniprot
Match: D7G3T2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3T2_ECTSI) HSP 1 Score: 421 bits (1083), Expect = 2.010e-146 Identity = 232/267 (86.89%), Postives = 236/267 (88.39%), Query Frame = 1
Query: 1 MAKHQEAAAAELLTVALTSSGLESVLSQLTDRVNDLESVNKAQQHRLEALAHQTPEVDISDKHLCETSALQNLAGKSPEQQLVAMSDAICSIGQSVNQFYKDVKYREAVQQATDAAQDELMQMELDRLNREVDIKFTRKDAQDMRKMIAKEMHAMREEMAQEFAGKLGVVYDEVLGQLSRVTDHVRVIQETTGATNELLKYRIEEAFTDIQSASEDMDAKIRKITDMFGLSANPDDNDTPSFPEMLRSIGDLERLALGCRDDIDEQT 801
MAKHQ+AAAAELLTVALTSSGLESVLSQLTDRVNDLESVNKAQ+HRLE LAHQTPEVDISDKHLCETSALQNLAGKSPEQQLVAMSDAI SIGQSVNQFYKDVKYREAVQQATDAAQDELMQMELDRLN EVDIKFTRKDAQDMR+MIAKEM A SRVTDHVRVIQETTGATNELLKYRIEEAFTDIQ AS DMDAKIRKITDMFGLSANPDDN TPSFPEMLR+IGDLERLALGCRDDIDEQT
Sbjct: 1 MAKHQQAAAAELLTVALTSSGLESVLSQLTDRVNDLESVNKAQKHRLETLAHQTPEVDISDKHLCETSALQNLAGKSPEQQLVAMSDAIVSIGQSVNQFYKDVKYREAVQQATDAAQDELMQMELDRLNGEVDIKFTRKDAQDMRRMIAKEMRAXXXXXXXXXXXXXXXXXXXXXXXXSRVTDHVRVIQETTGATNELLKYRIEEAFTDIQRASVDMDAKIRKITDMFGLSANPDDNGTPSFPEMLRNIGDLERLALGCRDDIDEQT 267 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1322.2430.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1322.2430.1 >prot_E-fasciculatus_F_contig1322.2430.1 ID=prot_E-fasciculatus_F_contig1322.2430.1|Name=mRNA_E-fasciculatus_F_contig1322.2430.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=312bp MAKHQEAAAAELLTVALTSSGLESVLSQLTDRVNDLESVNKAQQHRLEALback to top mRNA from alignment at E-fasciculatus_F_contig1322:896..8260- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1322.2430.1 ID=mRNA_E-fasciculatus_F_contig1322.2430.1|Name=mRNA_E-fasciculatus_F_contig1322.2430.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=7365bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1322:896..8260- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1322:896..8260- >mRNA_E-fasciculatus_F_contig1322.2430.1 ID=mRNA_E-fasciculatus_F_contig1322.2430.1|Name=mRNA_E-fasciculatus_F_contig1322.2430.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1872bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1322:896..8260- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |