mRNA_E-fasciculatus_F_contig13213.2425.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
|
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13213.2425.1 vs. uniprot
Match: D7FU26_ECTSI (Endo-1,3-beta-glucanase C-terminal, family GH16 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU26_ECTSI) HSP 1 Score: 298 bits (762), Expect = 9.790e-101 Identity = 136/147 (92.52%), Postives = 141/147 (95.92%), Query Frame = 1
Query: 7 MDAWDETYGVYTLDEAEGTFNDDFHTFGLYWDENEMYTYIDEDSNRVLSVDFGEGSAEDGFWEKGGFEERFPGVENPWKGANAIAPYDQKFYVVMNVAVGGVSGFFPDGEGGKMWADKDSDAAMKFHETTHDWHSTWDGKGSALQVQ 447
MDAWDETYGVYTLDEAEGTFNDDFHTFGLYWDENEMYTYID+DSNRVL+VDFGEGS EDGFWEKGGFEERFPGVENPWKGA IAPYDQKFYVVMNVAVGGVSGFFPDG GGKMW +KDSDAAMKFHE THDWHSTWDGKGSALQ++
Sbjct: 1 MDAWDETYGVYTLDEAEGTFNDDFHTFGLYWDENEMYTYIDDDSNRVLTVDFGEGSGEDGFWEKGGFEERFPGVENPWKGAKPIAPYDQKFYVVMNVAVGGVSGFFPDGVGGKMWDNKDSDAAMKFHEATHDWHSTWDGKGSALQIE 147
BLAST of mRNA_E-fasciculatus_F_contig13213.2425.1 vs. uniprot
Match: A0A6H5L4K1_9PHAE (GH16 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4K1_9PHAE) HSP 1 Score: 286 bits (732), Expect = 5.410e-93 Identity = 131/149 (87.92%), Postives = 139/149 (93.29%), Query Frame = 1
Query: 1 HSMDAWDETYGVYTLDEAEGTFNDDFHTFGLYWDENEMYTYIDEDSNRVLSVDFGEGSAEDGFWEKGGFEERFPGVENPWKGANAIAPYDQKFYVVMNVAVGGVSGFFPDGEGGKMWADKDSDAAMKFHETTHDWHSTWDGKGSALQVQ 447
+SMD+WDETYGVYTLDEAEGTFNDDFHTFGLYWDENEMYTYID+DSNR+L+VDFG S EDGFWEKG FEERFPGVENPWKGA IAPYDQKFYVVMNVAVGGVSGFFPDG GGKMW +KDSDAAMKFHE THDWHSTWDGK SALQ++
Sbjct: 233 YSMDSWDETYGVYTLDEAEGTFNDDFHTFGLYWDENEMYTYIDDDSNRLLTVDFGAESEEDGFWEKGHFEERFPGVENPWKGAKPIAPYDQKFYVVMNVAVGGVSGFFPDGVGGKMWHNKDSDAAMKFHEATHDWHSTWDGKDSALQIE 381
BLAST of mRNA_E-fasciculatus_F_contig13213.2425.1 vs. uniprot
Match: A0A835ZB27_9STRA (Glucan binding protein-2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB27_9STRA) HSP 1 Score: 150 bits (379), Expect = 1.130e-40 Identity = 75/149 (50.34%), Postives = 101/149 (67.79%), Query Frame = 1
Query: 1 HSMDAWDETYGVYTLDEAEGTFNDDFHTFGLYWDENEMYTYIDEDSNRVLSVDFGEGSAEDGFWEKGGFEERFPGVENPWKGANAIAPYDQKFYVVMNVAVGGVSGFFPDGEGGKMWADKDSDAAMKFHETTHDWHSTWDGKGSALQVQ 447
+S + W T G A TF DDFHT+GL+WD++ +YTY+D+DSNRV+S+ F E ++ WEKGGFE G+ NPW+G +A AP+DQ+FY+ M+V+VGGV+G+F DG GK W D + AAM+F T DW TW SALQV+
Sbjct: 226 YSQNKWPLTIGSVAAP-AGDTFADDFHTYGLFWDQDILYTYVDDDSNRVMSIAFNESAS---MWEKGGFEGS--GMANPWEGGSAAAPFDQRFYISMSVSVGGVNGYFIDGMEGKPWTDSNGQAAMEFWNATSDWWPTW--SDSALQVE 366
BLAST of mRNA_E-fasciculatus_F_contig13213.2425.1 vs. uniprot
Match: A0A8J8NPG5_HALGN (GH16 domain-containing protein n=1 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8NPG5_HALGN) HSP 1 Score: 142 bits (357), Expect = 3.950e-38 Identity = 70/153 (45.75%), Postives = 97/153 (63.40%), Query Frame = 1
Query: 1 HSMDAWDE-----TYGVYTLDEAEGTFNDDFHTFGLYWDENEMYTYIDEDSNRVLSVDFGEGSAEDGFWEKGGFEERFPGVENPWKGANAIAPYDQKFYVVMNVAVGGVSGFFPDGEGGKMWADKDSDAAMKFHETTHDWHSTWDGKGSALQV 444
H AWD+ T+ V+ + + D FHT+GLYWD+N +YTYID++S +VL VDF E GFWEKGGF +NPW G N AP++++FY+VMN+AVGG +FPDG+GGK WA+ D A F+ W+ TW G+ +AL++
Sbjct: 201 HWGPAWDQNRFPLTHKVWFTPDGS-SLGDAFHTYGLYWDQNGLYTYIDDESKKVLQVDF----KEKGFWEKGGFPST---DDNPWVGENNAAPFNREFYIVMNLAVGGTGNYFPDGQGGKPWANGDPHAPNAFYNAKGQWYPTWKGEDAALKI 345
BLAST of mRNA_E-fasciculatus_F_contig13213.2425.1 vs. uniprot
Match: A0A7S3H4A6_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H4A6_9STRA) HSP 1 Score: 140 bits (354), Expect = 8.950e-38 Identity = 70/144 (48.61%), Postives = 93/144 (64.58%), Query Frame = 1
Query: 37 YTLDEAE-----GTFNDDFHTFGLYWDENEMYTYIDEDSNRVLSVDFGEGSAEDGFWEKGGFEERFPGVENPWKGANAIAPYDQKFYVVMNVAVGGVSGFFPDGEGGKMWADKDSDAAMKFHETTHDWHSTWD--GKGSALQVQ 447
YTL E GT NDDFHTFGLYW E+ +YTY+D D NRVL + + FW++GG+++ P + NPW G +AP+DQKFY++ N+AVGGV+G+FPDG+GGK W+D S A F+ TWD G SALQ++
Sbjct: 212 YTLAHGEKCLDAGTLNDDFHTFGLYWSEDHIYTYLDNDDNRVLDLPVNQS-----FWQRGGWDKN-PTLNNPWTGQPDVAPFDQKFYLIFNLAVGGVNGYFPDGQGGKPWSDATSTAMADFNNALDSVVKTWDMVGDDSALQIR 349
BLAST of mRNA_E-fasciculatus_F_contig13213.2425.1 vs. uniprot
Match: A0A4D9CN72_9STRA (GH16 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CN72_9STRA) HSP 1 Score: 139 bits (349), Expect = 1.300e-35 Identity = 68/148 (45.95%), Postives = 94/148 (63.51%), Query Frame = 1
Query: 4 SMDAWDETYGVYTLDEAEGTFNDDFHTFGLYWDENEMYTYIDEDSNRVLSVDFGEGSAEDGFWEKGGFEERFPGVENPWKGANAIAPYDQKFYVVMNVAVGGVSGFFPDGEGGKMWADKDSDAAMKFHETTHDWHSTWDGKGSALQVQ 447
++D +D T +TL E +GTFNDDFH FG+ W+E +YTY+D + +VL V F + F+E+G F + PG NPW G AP+DQ FY+V+NVAVGG+S FF DGE GK W + A F + +W+ +W G+ SALQV+
Sbjct: 310 ALDKYDMTCESFTLPEGKGTFNDDFHVFGMVWNEQGLYTYLDREDQKVLEVKF-----DRPFFERGDFSD-VPGTGNPWIGRPNAAPFDQPFYLVLNVAVGGLSNFFEDGEDGKPWTNTGKGAPYLFAKAKDEWYPSWAGRDSALQVK 451
BLAST of mRNA_E-fasciculatus_F_contig13213.2425.1 vs. uniprot
Match: A0A7S3GC02_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3GC02_9EUKA) HSP 1 Score: 135 bits (340), Expect = 3.010e-35 Identity = 62/144 (43.06%), Postives = 87/144 (60.42%), Query Frame = 1
Query: 7 MDAWDETYGVYTLDEAEGTFNDDFHTFGLYWDENEMYTYIDEDSNRVLSVDFGEGSAEDGFWEKGGFEERFPGVENPWKGANAIAPYDQKFYVVMNVAVGGVSGFFPDGEGGKMWADKDSDAAMKFHETTHDWHSTWDGKGSAL 438
D + T+ YT+ + DDFH +GLYWDENEMYTYID+DS RVL++ ++ FW +GGF+ +NPW+G AP+D+ F+ V+NVA GG +G+FPDG GK W+D D A F + + W+ TW A+
Sbjct: 270 QDPYSLTHEQYTVGSGSPSLADDFHVYGLYWDENEMYTYIDDDSQRVLNL-----KMDESFWARGGFDSL--NADNPWQGGGVNAPFDKNFFFVLNVACGGTAGYFPDGVAGKPWSDSDPHAVNAFIQAQNSWYPTWTSPSLAI 406
BLAST of mRNA_E-fasciculatus_F_contig13213.2425.1 vs. uniprot
Match: B2NIF1_9STRA (Glucan binding protein-2 n=2 Tax=Actinophrys sol TaxID=238771 RepID=B2NIF1_9STRA) HSP 1 Score: 132 bits (333), Expect = 1.560e-34 Identity = 68/149 (45.64%), Postives = 96/149 (64.43%), Query Frame = 1
Query: 1 HSMDAWDETYGVYTLDEAEGTFNDDFHTFGLYWDENEMYTYIDEDSNRVLSVDFGEGSAEDGFWEKGGFEERFPGVENPWKGANAI-APYDQKFYVVMNVAVGGVSGFFPDGEGGKMWADKDSDAAMKFHETTHDWHSTWDGKGSALQV 444
+ D + T YT+ ++ F DFHTFGLYW+ +++YTYID+DSNRVL V F E FW +GG++ + +PW G +A+ AP+++ FY+V ++AVGGVSGFFPDGE K WAD S A ++F + W+ TW G ALQ+
Sbjct: 224 YGQDKYTLTTETYTMSSSD--FASDFHTFGLYWNSDKLYTYIDDDSNRVLEVTFDET-----FWTRGGWDSSV--LNDPWVGESAMSAPFNKPFYIVFDLAVGGVSGFFPDGECSKPWADTSSIAYLQFWQGKGQWYPTWSGDDVALQI 363
BLAST of mRNA_E-fasciculatus_F_contig13213.2425.1 vs. uniprot
Match: J9J251_9SPIT ((1,3)-beta-d-glucan binding protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9J251_9SPIT) HSP 1 Score: 130 bits (328), Expect = 6.680e-34 Identity = 63/145 (43.45%), Postives = 90/145 (62.07%), Query Frame = 1
Query: 16 WDETYGVYTLDEAEGT--FNDDFHTFGLYWDENEMYTYIDEDSNRVLSVDFGEGSAEDGFWEKGGFEERFPGVENPWKGANAIAPYDQKFYVVMNVAVGGVSGFFPDGEGGKMWADKDSDAAMKFHETTHDWHSTWDGKGSALQV 444
WD+ T + + T NDDFH +GLYWDE+ +YTY D+ N+VL VDF + S FW++G F F +NPW G N AP++++FY++MN+AVGG + +FPDG GGK W++ + +F W TW G+ SALQ+
Sbjct: 204 WDQNKFSLTHKDFKHTASLNDDFHVYGLYWDESGLYTYFDKPENKVLEVDFTKQS----FWDRGQFPNTF---DNPWVGENNAAPFNREFYLIMNLAVGGTANYFPDGMGGKPWSNTSPHSVNEFWNARGAWQQTWKGEASALQI 341
BLAST of mRNA_E-fasciculatus_F_contig13213.2425.1 vs. uniprot
Match: A0A0H5QSM4_9EUKA (GH16 domain-containing protein n=2 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5QSM4_9EUKA) HSP 1 Score: 130 bits (327), Expect = 1.260e-33 Identity = 61/145 (42.07%), Postives = 96/145 (66.21%), Query Frame = 1
Query: 10 DAWDETYGVYTLDEAEGTFNDDFHTFGLYWDENEMYTYIDEDSNRVLSVDFGEGSAEDGFWEKGGFEERFPGVENPWKGANAIAPYDQKFYVVMNVAVGGVSGFFPDGEGGKMWADKDSDAAMKFHETTHDWHSTWDGKGSALQV 444
D W +T+G Y+L +G F DDFHTF + W ++E+ TY+D+ N +L+V + G+ G WE GG++ P ++NPW+G + AP+DQKF+++MNVAVGG + +FPDG+GGK W + + A F + W TW G+ +A+++
Sbjct: 217 DQWPKTHGSYSL--PDGDFGDDFHTFVMEWSKDELITYVDKPENVMLNVKWN-GT---GHWENGGWDNN-PRMKNPWEGRGSNAPFDQKFFMIMNVAVGGTNTYFPDGKGGKPWTNANQHAINAFWQAKDQWFPTWKGEDAAMKI 354 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13213.2425.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13213.2425.1 >prot_E-fasciculatus_F_contig13213.2425.1 ID=prot_E-fasciculatus_F_contig13213.2425.1|Name=mRNA_E-fasciculatus_F_contig13213.2425.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=147bp MDAWDETYGVYTLDEAEGTFNDDFHTFGLYWDENEMYTYIDEDSNRVLSVback to top mRNA from alignment at E-fasciculatus_F_contig13213:1813..3691- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13213.2425.1 ID=mRNA_E-fasciculatus_F_contig13213.2425.1|Name=mRNA_E-fasciculatus_F_contig13213.2425.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1879bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13213:1813..3691- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13213:1813..3691- >mRNA_E-fasciculatus_F_contig13213.2425.1 ID=mRNA_E-fasciculatus_F_contig13213.2425.1|Name=mRNA_E-fasciculatus_F_contig13213.2425.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=882bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13213:1813..3691- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |