mRNA_E-fasciculatus_F_contig13212.2424.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig13212.2424.1
Unique NamemRNA_E-fasciculatus_F_contig13212.2424.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13212.2424.1 vs. uniprot
Match: D7FZM4_ECTSI (CRAL-TRIO domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D7FZM4_ECTSI)

HSP 1 Score: 660 bits (1704), Expect = 8.560e-228
Identity = 348/407 (85.50%), Postives = 357/407 (87.71%), Query Frame = 1 
Query:   73 LSAPCPRSSSCERCSALPVSRHFSEISTKGGDLSSNSSSTVATGLRRADSRWHLGLVLGLLIGGLXXXXXXXXXXXXXXXX--EGASWFEDKPAFVACAAACSAVLSVAVVAWRRTGNDAEQASETVAGRGGTTGGLSVFGRRLRRATVGSAGRKEAFG-GEDGGEGEPLLAGESLHAPGPSLSVSEPAGRSDVEAGAVGGADGPVSSRYIAACKGNAVAAKAMWHETIKWRADTGAERSLSTPQPTLDIIKQCYPYFVHGRSKKGEVVVYEQTGKMQFGRLADAGVSPFDMQMHYSFFNDFVFSKLNAEDDDDAKLMTVLDVGELRLATIKNNTVVTKYLAATAEVMQKHYPERQSRILVVNAPWWFAGIWKGVSGVLSSGTQAKLQIRGKNFLPTLLEHVDASQV 1284
            +SAPCPRSSSCERCSA P SRHFSEIS+KGGDLSSNSSST+A GLRRADS WHLGLVLGLLIGGL                  EG SWF+DKPAFVACAAACS VLSVAVVAWRRTGND    SETV G G TTG LSVFGRRLR    GSAGRKEAFG GEDGGE EPLLAG SL APGPS S SEP  R+DVEAGA GGAD PVSSRY+AACKGN VAAKAMW ET+KWR DTGAERSLSTPQPTLDIIKQCYPYFVHGRSKKGEVVVYEQTGKMQFGRLADAGVSPFDMQMHY+FFNDFVFSKLN EDDDDAKLMTVLDVGELRLATIKNNTVVTKYLAATAEVMQKHYPERQSRILVVNAPWWFAGIWKGVSGVLSSGTQAKLQIRGKNFLPTLLEHVDASQ+
Sbjct:    1 MSAPCPRSSSCERCSAFPGSRHFSEISSKGGDLSSNSSSTIAAGLRRADSGWHLGLVLGLLIGGLCYGRGGGGGSSVVAKDGGEGTSWFDDKPAFVACAAACSVVLSVAVVAWRRTGNDGAIKSETVVGCGRTTGALSVFGRRLRHGKGGSAGRKEAFGEGEDGGEEEPLLAGGSLDAPGPSSSASEPGERTDVEAGAGGGADCPVSSRYLAACKGNTVAAKAMWDETVKWRTDTGAERSLSTPQPTLDIIKQCYPYFVHGRSKKGEVVVYEQTGKMQFGRLADAGVSPFDMQMHYAFFNDFVFSKLNDEDDDDAKLMTVLDVGELRLATIKNNTVVTKYLAATAEVMQKHYPERQSRILVVNAPWWFAGIWKGVSGVLSSGTQAKLQIRGKNFLPTLLEHVDASQI 407
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13212.2424.1 vs. uniprot
Match: A0A835YSU7_9STRA (CRAL-TRIO domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSU7_9STRA)

HSP 1 Score: 188 bits (478), Expect = 1.290e-48
Identity = 100/235 (42.55%), Postives = 142/235 (60.43%), Query Frame = 1 
Query:  679 VSSRYIAACKGNAVAAKAMWHETIKWRADTGAERSLSTPQPTLDIIKQCYPYFVHGRSKKGEVVVYEQTGKMQFGRLADAGVSPFDMQMHYSFFNDFVFSKLNAEDDD----------------DAKLMTVLDVGELRLATIKNNTVVTKYLAATAEVMQKHYPERQSRILVVNAPWWFAGIW-----------------KGVSGVLSSGTQAKLQIRGKNFLPTLLEHVDASQV 1284
            V  RY+ A  G A AA A W  + +WR +   +  L+ PQP   I+K+CYP+F+HGR++ G VV YE  G+M FGRLA AGV+P D+Q HY F N++++ +L+  D                  D +LMTVLDV  L ++T+KNNTV+ +Y+ A+AEVMQ HYP+RQ+RI+++NAPWWFAG W                    +GVLS+ T +KLQI G ++L  L + +   Q+
Sbjct:  233 VPGRYVRAF-GEANAA-AKWSASCEWRRERRVDEVLTVPQPVFTIMKECYPHFLHGRARDGGVVCYENPGRMDFGRLAAAGVTPDDLQRHYCFVNEYIWQRLSPGDXXXXXXXXXXXXXXXXXXDDQLMTVLDVNGLGMSTLKNNTVMHRYMRASAEVMQAHYPDRQARIVIINAPWWFAGAWLDCIXXXXXXXXXXXXXHSFAGVLSANTTSKLQICGTDYLAALRKLIPDDQI 465
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13212.2424.1 vs. uniprot
Match: A0A7R9U9K9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9K9_9STRA)

HSP 1 Score: 147 bits (371), Expect = 1.060e-36
Identity = 79/218 (36.24%), Postives = 127/218 (58.26%), Query Frame = 1 
Query:  661 GGADGPVSSRYIAACKGNAVAAKAMWHETIKWRADTGAERSLSTPQPTLDIIKQCYPYFVHGRSKKGEVVVYEQTGKMQFGRLADAGVSPFDMQMHYSFFNDFVFSKLNAEDDDDAKLMTVLDVGELRLATIKNNTVVTKYLAATAEVMQKHYPERQSRILVVNAPWWFAGIWKGVSGVLSSGTQAKLQIRGKNFLPTLLEHVDAS-----QVCGGGV 1299
            GG    V  R++ A  G+   A   +  T  WR +   +R LSTP+PT D +K+ +P+F+HGRS+KG VV YE+ G +  GRLA +G+S  D+  H  F  +++FS L+A   D AK++ V DV  + + ++K    +  +L  + +VMQ HYPER   + ++NAP+WF   W+ V  +++  T+A+++I G NF   L  ++  +      V GGG+
Sbjct:  121 GGEASMVPERFLLAEGGDLERASQRFAATQLWREEHELDRVLSTPRPTFDKVKRLFPHFLHGRSRKGNVVRYERLGDIDAGRLAASGLSAVDLTNHLVFLAEYIFSHLDAHRPD-AKVLVVCDVKGISIGSLKGE--ILSFLQMSTQVMQAHYPERMESMFIINAPFWFTSAWRVVGVLMAPQTRARIKILGANFQDELAAYIPPNGAPFEYVDGGGL 335
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BLAST of mRNA_E-fasciculatus_F_contig13212.2424.1 vs. uniprot
Match: A0A4D9CRJ4_9STRA (CRAL-TRIO domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRJ4_9STRA)

HSP 1 Score: 138 bits (348), Expect = 1.480e-31
Identity = 71/189 (37.57%), Postives = 110/189 (58.20%), Query Frame = 1 
Query:  670 DGPVSSRYIAACKGNAVAAKAMWHETIKWRADTGAERSLSTPQPTLDIIKQCYPYFVHGRSKKGEVVVYEQTGKMQFGRLADAGVSPFDMQMHYSFFNDFVFSKLN--AEDDDDAKLMTVLDVGELRLATIKNNTVVTKYLAATAEVMQKHYPERQSRILVVNAPWWFAGIWKGVSGVLSSGTQAKLQI 1230
            D PV + ++ A  G+ V A+A +  ++ WRA  G +  L  P P    IK+ YP++VHGR + GE+VV+EQ G+M  G L   G+   ++  HY +FN+F++  L    E +DD + MTVLD+G L L ++  +  V + L  T+ +M  HYP R  RI VVN P+   G W+ ++ VL    Q K+++
Sbjct:  354 DRPVPATFLQAAGGDRVKAQAHYRASLAWRAREGVDGILRRPHPDFAAIKEHYPHYVHGRGRGGELVVFEQPGRMDLGALRKRGIGAAEIGRHYVYFNEFLYRALRREGEGEDDGRAMTVLDIGGLGLTSLTPD--VLEVLRTTSHLMHAHYPGRVLRICVVNVPFLVGGAWRLLASVLPQAVQEKIEV 540
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13212.2424.1 vs. uniprot
Match: A0A4D9D0V4_9STRA (CRAL-TRIO domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D0V4_9STRA)

HSP 1 Score: 128 bits (322), Expect = 3.170e-28
Identity = 61/186 (32.80%), Postives = 107/186 (57.53%), Query Frame = 1 
Query:  679 VSSRYIAACKGNAVAAKAMWHETIKWRADTGAERSLSTPQPTLDIIKQCYPYFVHGRSKKGEVVVYEQTGKMQFGRLADAGVSPFDMQMHYSFFNDFVFSKLNAEDDDDAKLMTVLDVGELRLATIKNNTVVTKYLAATAEVMQKHYPERQSRILVVNAPWWFAGIWKGVSGVLSSGTQAKLQIRG 1236
            +  RY+  C G+ V A   W ET+ WRA  G +  L  PQ    +IK+CYP+F+H R + G  V YE  G +   +L   GV+  ++  +Y F  +++++KL  EDD+   ++++LDV  + +  ++ + +  ++L A + V+Q+HY ER  ++ ++NAP WF+ +WK       SG  A++ + G
Sbjct:  228 IPPRYVRGCNGDRVEAARRWKETLAWRAAEGVDTILREPQRNFALIKECYPHFLHRRDRGGRPVYYELLGHINLKKLKARGVTLDEVVRYYIFLTEYIWNKLQPEDDERGAMVSILDVAHVGIMDLRGDAL--EFLKAASRVVQQHYVERSYKMFILNAPAWFSVLWK-------SGKLAEMSLLG 404
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BLAST of mRNA_E-fasciculatus_F_contig13212.2424.1 vs. uniprot
Match: A0A7S2V2B7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2B7_9STRA)

HSP 1 Score: 116 bits (290), Expect = 4.200e-25
Identity = 58/190 (30.53%), Postives = 108/190 (56.84%), Query Frame = 1 
Query:  676 PVSSRYIAACKGNAVAAKAMWHETIKWRADTGAERSLSTPQPTLDIIKQCYPYFVHGRSKKGEVVVYEQTGKMQFGRLADAGVSPFDMQMHYSFFNDFVFSKLNAEDDDDAKLMTVLDVGELRLATIKNNTVVTKYLAATAEVMQKHYPERQSRILVVNAPWWFAGIWKGVSGVLSSGTQAKLQIRGKNF 1245
            PV  RY+ +CKG+   A+  W+ T+KWR + G +  L   QP    IK+ YP+F+H R ++G  V Y++ G+++  +L   GV   ++  H+ F +++++  +  E DD+  ++ V DV  +   +++   VV +++   +++   HY ER  +  ++NAP WFA I++ V+ +L   T  K+ I G + 
Sbjct:  162 PVPLRYLKSCKGDVEEAQKRWNTTVKWRKENGVDDVLQKAQPHFHTIKKWYPHFIHSRDREGHPVYYDKLGEIKVEKLQQNGVDVEELLEHFIFHSEYLWKVV--EPDDNFLMVAVEDVQGINAFSLQG--VVFEFIKHVSKMFSDHYCERSYKTFIINAPGWFAWIFRVVAPLLDPKTTEKISILGTDL 347
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BLAST of mRNA_E-fasciculatus_F_contig13212.2424.1 vs. uniprot
Match: A0A7S2SHG9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SHG9_9STRA)

HSP 1 Score: 118 bits (295), Expect = 5.340e-25
Identity = 60/191 (31.41%), Postives = 103/191 (53.93%), Query Frame = 1 
Query:  724 AKAMWHETIKWRADTGAERSLSTPQPTLDIIKQCYPYFVHGRSKKGEVVVYEQTGKMQFGRLADAGVSPFDMQMHYSFFNDFV---FSKLNAEDDDDAKLMTVLDVGELRLATIKNNTVVTKYLAATAEVMQKHYPERQSRILVVNAPWWFAGIWKGVSGVLSSGTQAKLQIRGKNFLP-TLLEHVDASQV 1284
            AK  +   + WR  +  +  L        + K+ YP+F+HGR+++GE+V YE  GKM     A AGV+   ++  Y+  ++++   F +         ++MTV+DV  L +  +  +T    +L   +E+M  +YPER  RI +VNAP+WF+G WKG+ G+L +    ++QI G      TL + +D  ++
Sbjct:  351 AKKKFQAMLDWRERSSVDTVLRRRHEKYFVFKESYPFFIHGRTREGELVTYEMPGKMDIPAAARAGVTTATLREIYTCIHEYITQLFQEYTGNPSSVVRMMTVIDVEGLGIGALSKDTFT--FLLTASEIMNNYYPERVCRICIVNAPFWFSGAWKGIGGMLPAAVVDRVQISGTGDAELTLRKFIDVEEL 539
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13212.2424.1 vs. uniprot
Match: A0A7S3XUI5_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUI5_HETAK)

HSP 1 Score: 114 bits (286), Expect = 6.800e-25
Identity = 66/203 (32.51%), Postives = 110/203 (54.19%), Query Frame = 1 
Query:  679 VSSRYIAACKGNAVAAKAMWHETIKWRADTGAERSLSTPQPTLDIIKQCYPYFVHGRSKKGEVVVYEQTGKMQFGRLADAGVSPFDMQMHYSFFNDFVFSKLNAEDDDDAKLMTVLDVGELRLATIKNNTVVTKYLAATAEVMQKHYPERQSRILVVNAPWWFAGIWKGVSGVLSSGTQAKLQIRGK-NFLPTLLEHVDASQV 1284
            V ++++  C G+AV A+  W  T +WR     +  L  PQP   +IK+ YP+F  G ++ G +V YEQ+GK+       AG +  D+  HY+F  +F +  L+       K ++VLD+  + LA  +      +++  +A ++Q+HYPE    +LVVN P WFA +WK    +++  T  K++I G  + L  L E +D  Q+
Sbjct:   30 VPAKFMNGCFGDAVEARRRWDITYRWRRKEEIDALLLKPQPFYHVIKKGYPHFYCGYARSGNLVYYEQSGKVDLSEAEAAGATLDDLVAHYTFLAEFCWRVLDPSAA--GKTVSVLDLAGISLAFCRGRAF--EFVKRSAALLQEHYPECCQVMLVVNVPSWFALVWKLAKPLVNEVTLKKIRIVGAADTLSALQEFIDDDQI 228
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13212.2424.1 vs. uniprot
Match: A0A7S4KCE1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4KCE1_9STRA)

HSP 1 Score: 113 bits (282), Expect = 4.150e-23
Identity = 66/209 (31.58%), Postives = 99/209 (47.37%), Query Frame = 1 
Query:  691 YIAACKGNAVAAKAMWHETIKWRADTGAERSLSTPQPTLDIIKQCYPYFVHGRSKKGEVVVYEQTGKMQFGRLADAGVSPFDMQMHYSFFNDFVFSKL-----------NAEDDDDAKLMTVLDVGELRLATIKNNTVVTKYLAATAEVMQKHYPERQSRILVVNAPWWFAGIWKGVSGVLSSGTQAKLQIRGKNFLPTLLEHVDASQV 1284
            ++  C G    A AMW ET +WR   GA +  +T       IKQ YP+F HG SK+G  +VYE  GKM    L   G    DM   Y +F +F+ S L            + D +   L  V+D+    L+++  + V  +Y+   +E+   HYP   +R  V+N+P+W AG W G+ G+L       L +    +   L E +D  Q+
Sbjct:  283 FLEICNGKREKAGAMWAETRQWRVRDGAWKIHTTRHEWFQQIKQAYPHFAHGYSKQGYPIVYECPGKMNLKNLLRQGCGVEDMLFSYVYFMEFIQSVLCRLPELQSRRRGSPDPEGWGLTLVMDISGASLSSLSGDVV--RYMKRASEINSAHYPLSLNRAFVINSPFWLAGAWSGIRGILPESVHVDL-LSSSAYGDKLREWIDDDQI 488
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13212.2424.1 vs. uniprot
Match: A0A7S1UMG2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UMG2_9STRA)

HSP 1 Score: 108 bits (270), Expect = 1.070e-21
Identity = 64/222 (28.83%), Postives = 104/222 (46.85%), Query Frame = 1 
Query:  661 GGADGPVSSRYIAACKGNAVAAKAMWHETIKWRADTGAERSLSTPQPTLDIIKQCYPYFVHGRSKKGEVVVYEQTGKMQFGRLADAGVSPFDMQMHYSFFNDFVFS-------KLNAEDDDDAK-------LMTVLDVGELRLATIKNNTVVTKYLAATAEVMQKHYPERQSRILVVNAPWWFAGIWKGVSGVLSSGTQAKLQIRGKNFLPTLLEHVDASQV 1284
            G  +  + + Y+  C GN   A+AM+ +T  WR +    +   TP P    IK+ YP+F+HG SK G  +VYEQ GKM        G    DM  H  F  +++ +        +NA  D+  +        M V+D+    ++T+  +  V  YLA   +V   HYP    R  +VN+PWW AG + G   +L    +  +    ++ +  L + +D +Q+
Sbjct:  363 GDCEARIPANYLKLCSGNENKARAMYQKTQAWRQENAIWKVHRTPHPFYHQIKKAYPHFIHGHSKCGMTIVYEQPGKMSLKEFFRNGGGVPDMVRHCWFLMEYIANCVSTRKELVNARGDEPGEPLSANWGTMIVMDISGASVSTLSGD--VLAYLAKAGDVNNNHYPMAMKRAFLVNSPWWLAGAFSGFRSILPESVKVDILSESQS-VTALRKFIDDNQI 581
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13212.2424.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZM4_ECTSI8.560e-22885.50CRAL-TRIO domain-containing protein n=3 Tax=Ectoca... [more]
A0A835YSU7_9STRA1.290e-4842.55CRAL-TRIO domain-containing protein n=1 Tax=Tribon... [more]
A0A7R9U9K9_9STRA1.060e-3636.24Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A4D9CRJ4_9STRA1.480e-3137.57CRAL-TRIO domain-containing protein n=1 Tax=Nannoc... [more]
A0A4D9D0V4_9STRA3.170e-2832.80CRAL-TRIO domain-containing protein n=1 Tax=Nannoc... [more]
A0A7S2V2B7_9STRA4.200e-2530.53Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2SHG9_9STRA5.340e-2531.41Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S3XUI5_HETAK6.800e-2532.51Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S4KCE1_9STRA4.150e-2331.58Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S1UMG2_9STRA1.070e-2128.83Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13212contigE-fasciculatus_F_contig13212:495..3652 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score666.0
Seed ortholog evalue1.2e-188
Seed eggNOG ortholog2880.D7FZM4
EggNOG free text desc.macromolecule localization
EggNOG OGsKOG1471@1,KOG1471@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionCRAL-TRIO domain
Ec32 orthologEc-17_003760.1
Exons5
Model size1311
Cds size1311
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13212.2424.1prot_E-fasciculatus_F_contig13212.2424.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig13212 495..3652 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927825.0165274-CDS-E-fasciculatus_F_contig13212:494..7261622927825.0165274-CDS-E-fasciculatus_F_contig13212:494..726Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13212 495..726 -
1695995710.8301218-CDS-E-fasciculatus_F_contig13212:494..7261695995710.8301218-CDS-E-fasciculatus_F_contig13212:494..726Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13212 495..726 -
1622927825.0371635-CDS-E-fasciculatus_F_contig13212:1371..15081622927825.0371635-CDS-E-fasciculatus_F_contig13212:1371..1508Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13212 1372..1508 -
1695995710.8420308-CDS-E-fasciculatus_F_contig13212:1371..15081695995710.8420308-CDS-E-fasciculatus_F_contig13212:1371..1508Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13212 1372..1508 -
1622927825.0555358-CDS-E-fasciculatus_F_contig13212:1990..21801622927825.0555358-CDS-E-fasciculatus_F_contig13212:1990..2180Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13212 1991..2180 -
1695995710.8534973-CDS-E-fasciculatus_F_contig13212:1990..21801695995710.8534973-CDS-E-fasciculatus_F_contig13212:1990..2180Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13212 1991..2180 -
1622927825.0746028-CDS-E-fasciculatus_F_contig13212:2448..25111622927825.0746028-CDS-E-fasciculatus_F_contig13212:2448..2511Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13212 2449..2511 -
1695995710.869702-CDS-E-fasciculatus_F_contig13212:2448..25111695995710.869702-CDS-E-fasciculatus_F_contig13212:2448..2511Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13212 2449..2511 -
1622927825.1026473-CDS-E-fasciculatus_F_contig13212:2963..36521622927825.1026473-CDS-E-fasciculatus_F_contig13212:2963..3652Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13212 2964..3652 -
1695995710.8800924-CDS-E-fasciculatus_F_contig13212:2963..36521695995710.8800924-CDS-E-fasciculatus_F_contig13212:2963..3652Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13212 2964..3652 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig13212.2424.1

>prot_E-fasciculatus_F_contig13212.2424.1 ID=prot_E-fasciculatus_F_contig13212.2424.1|Name=mRNA_E-fasciculatus_F_contig13212.2424.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=437bp
QLQFFWARTLGGILTGALCSGALSLSAPCPRSSSCERCSALPVSRHFSEI
STKGGDLSSNSSSTVATGLRRADSRWHLGLVLGLLIGGLGYGRGGGGSGA
AKGGGEGASWFEDKPAFVACAAACSAVLSVAVVAWRRTGNDAEQASETVA
GRGGTTGGLSVFGRRLRRATVGSAGRKEAFGGEDGGEGEPLLAGESLHAP
GPSLSVSEPAGRSDVEAGAVGGADGPVSSRYIAACKGNAVAAKAMWHETI
KWRADTGAERSLSTPQPTLDIIKQCYPYFVHGRSKKGEVVVYEQTGKMQF
GRLADAGVSPFDMQMHYSFFNDFVFSKLNAEDDDDAKLMTVLDVGELRLA
TIKNNTVVTKYLAATAEVMQKHYPERQSRILVVNAPWWFAGIWKGVSGVL
SSGTQAKLQIRGKNFLPTLLEHVDASQVCGGGVWPT*
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mRNA from alignment at E-fasciculatus_F_contig13212:495..3652-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig13212.2424.1 ID=mRNA_E-fasciculatus_F_contig13212.2424.1|Name=mRNA_E-fasciculatus_F_contig13212.2424.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3158bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13212:495..3652- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CAACTCCAGTTCTTTTGGGCGCGAACTCTGGGCGGGATCCTCACGGGAGC
CCTGTGCAGCGGCGCACTGTCCCTGTCGGCACCCTGCCCGCGCTCCTCCT
CGTGCGAGCGGTGCAGCGCTCTCCCGGTATCGAGACATTTCTCGGAAATT
TCCACCAAGGGGGGGGACTTGAGCAGCAACTCTTCCAGCACCGTCGCCAC
CGGCCTCAGGCGCGCAGACTCCCGGTGGCACCTGGGCCTGGTGCTCGGCC
TCCTGATCGGCGGCCTGGGTTACGGCCGGGGAGGGGGGGGCTCCGGCGCT
GCGAAGGGCGGGGGGGAGGGGGCGTCGTGGTTTGAGGACAAACCCGCGTT
CGTGGCGTGCGCTGCCGCCTGCTCGGCGGTACTGTCCGTCGCCGTGGTGG
CCTGGCGGCGCACCGGCAACGACGCCGAGCAAGCAAGTGAAACCGTCGCC
GGGCGCGGCGGAACAACCGGGGGCCTGAGCGTCTTCGGCCGCCGCCTCCG
GCGGGCTACGGTGGGTTCCGCGGGGCGAAAGGAGGCGTTTGGGGGGGAGG
ACGGTGGGGAGGGGGAGCCCTTGCTGGCTGGTGAATCTCTTCACGCGCCT
GGGCCGTCGCTGTCGGTGTCTGAGCCGGCCGGGAGAAGTGACGTGGAGGC
AGGGGCAGTGGGGGGCGCTGATGGCCCCGTGTCTTCGAGGTGAGCTCGTC
TCTGTGGGGAAGGGCGTGTGAGCGGCAAGGGCCGATTGGATGGGTTTGAA
GTATTTTATCGCTTTGGTTCTCTAGTCTTTTCTCGCGTCGGCAGTTGGAA
CTGATGCCATGCATGCCACGCGCCTGAGATAGTTTTCCTGTGGGCGTTTG
CAACTGCAAAATTGGCATCAGACTAAACTGAACCTGCTGGTATTGTTGGA
CACGAGCGGTGGGTAGTAAAATGCAGAGCGCCTGAAGGCCAAACAGAACG
TCAAACCGCTCTCACTTCCACGAGAAAAAGCGGTCTCAGCGTGCTTTGAG
TCCGCCACTTCCTTGTGTTTTCTAGTCGCGCAAAAATTCCTGTTGATATG
TGACGTGTGACCACACCATCATGTTTGTTGACCCCTCTCATCACCCCGTG
TTTTCGTTGATTTCTGCCATCTCCCGGGTTTTGGCGGCAAGGTATATCGC
CGCCTGCAAGGGAAACGCGGTCGCCGCGAAGGCGATGTGGCACGAAACCA
TCAAGTGAGTCTGGGTCGATAGTATGGGTGGTGGTCATGATGCTGGTTAT
AGTGTGGGGTGGGCGCGACATAGGGGATACTCTTGCGGTCGCCATTGGTT
GAAACGCTCGCAAAGGGAACCTCGTTCTCAAGGGTCCTACTTCTCTCTAG
GGTAGCTGGCTAGAAGCGTGACGACAATTGCGGTAGCCCTCTGCTAAAGT
AGGTACCAGCCACGGACCCATTCCTGTTTGTGATTGTCTCAGCTCGCGTG
TTGGCCCCGCTGCTTGTCGAAGGTGGCGAGCGGACACAGGAGCCGAACGG
TCGCTTTCCACCCCCCAGCCGACCCTGGACATCATCAAGCAGTGCTACCC
TTACTTCGTGCACGGACGTTCCAAGAAGGGCGAGGTAGTGGTCTACGAGC
AAACGGGGAAGATGCAGTTCGGCCGCCTCGCGGATGCCGGGGTATCGCCG
TTCGATATGCAGGTTGGTGTTATTTCAGGGGCAGGGGGGGGTGCGTTGGC
CAAGACCCCGTGTGTTGTGGGCGATCAATAATGATGCTGTCCAGGCGAGT
TAGGTGTACGTCGAATCAAAACGAAACCACAAAAGCAGTTGGTTTAGACG
CATGAGGCGGTATCGCGCGAGCCAATTGCTCGCTTGGAGGAGGGTCCGGC
CTTCTAAAACTCGTGTTGAAGTTCGCCTTACTCCGAATCCTACAGAGAGC
CCAGGCTTGTTATAAACGTCTCAAACTGTGGGGTATCCGCCTCTCGGGTA
GTTGTCTCGCCCATTGCTGCCACGCTATCCTTCACTCTGTGCTCCACTCA
ACGCCACAGCAGTGTGAGTCACGTACGCTGACCGACGCTCGACTCAAAGC
TACAGCAGCGTGAGTCGCGGGCGCTGAGTCTCCCCCTTCCCAACCGGTGC
CCCCGTCGTCGGCCGTCCCTTGTTTCTTGTCCGTACACCATCAGATGCAC
TACTCGTTCTTCAACGACTTTGTTTTCAGCAAGCTCAACGCCGAGGACGA
CGACGATGCTAAGCTCATGACCGTGCTGGACGTCGGGGAGCTACGGCTGG
CGACCATCAAGAACAACACGGTCGTTACAAAGTGAGCCTACATAATGCAC
CTCTTTCCTGTTAGGAAATATAGGGGCCATGGGGACAATCACACGAGTAT
CCGAATGGTTCTTATGTTTCCGAGCAGATATGTATCTTGTCTTCCACAGA
TAGATGGATCTGCTGACCTGCGTGACGCCCTCGCTGGCCCAGACGTCGAT
GCGTGTTCGTTTTGCTCTTTGGGAATCGCTTTTTTGGGCTCCTAGCAAAG
GGCATTAGCCCAGGGCGAAAGTGGGCGTTTACCTACCTATCATTTGATAC
ATGGCTATCTTCGCGCTAAAGTGATTTTGTCCCCAAGAGGTATGTTGTCG
GCGGAACCCTGGAGTGCTTCTTTCTCGCACAGTGGCGCAATGACCGCAGC
GGTGTCGCTAGGATTACATCAATGGCCTTGCATGATGCCGATCACCCTCC
TCCCACACACGTGCCGTATCCGGTATCCGCTTGAAGAACCCCCCGATCGT
TGATCGGTCCTATAGGAACAGAGCTCCGTTCTCTCAAGCACGCGTGGTAA
TGGTCTAATGACTAAGGCATGCGAAACTTGGGTACACCCCTCCCCCTCCA
ATGGTCTAACAACTAAGGCATGCAAAACATGAGCACACCCCCGCCCCTCT
CCGCATGTCCCCTCTTCCTCCGTCAGGTACCTCGCCGCCACGGCGGAGGT
GATGCAGAAGCACTACCCCGAGCGGCAGAGCCGCATCCTTGTGGTCAACG
CTCCGTGGTGGTTCGCGGGCATCTGGAAAGGGGTGTCGGGCGTCCTGTCG
TCGGGGACCCAGGCGAAGCTGCAGATCAGAGGGAAGAACTTCTTGCCGAC
GCTGCTGGAGCACGTTGACGCTTCGCAGGTGTGTGGTGGTGGTGTGTGGC
CGACGTAG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13212:495..3652-

>mRNA_E-fasciculatus_F_contig13212.2424.1 ID=mRNA_E-fasciculatus_F_contig13212.2424.1|Name=mRNA_E-fasciculatus_F_contig13212.2424.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2622bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13212:495..3652- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CAACTCCAGTTCTTTTGGGCGCGAACTCTGGGCGGGATCCTCACGGGAGC
CCTGTGCAGCGGCGCACTGTCCCTGTCGGCACCCTGCCCGCGCTCCTCCT
CGTGCGAGCGGTGCAGCGCTCTCCCGGTATCGAGACATTTCTCGGAAATT
TCCACCAAGGGGGGGGACTTGAGCAGCAACTCTTCCAGCACCGTCGCCAC
CGGCCTCAGGCGCGCAGACTCCCGGTGGCACCTGGGCCTGGTGCTCGGCC
TCCTGATCGGCGGCCTGGGTTACGGCCGGGGAGGGGGGGGCTCCGGCGCT
GCGAAGGGCGGGGGGGAGGGGGCGTCGTGGTTTGAGGACAAACCCGCGTT
CGTGGCGTGCGCTGCCGCCTGCTCGGCGGTACTGTCCGTCGCCGTGGTGG
CCTGGCGGCGCACCGGCAACGACGCCGAGCAAGCAAGTGAAACCGTCGCC
GGGCGCGGCGGAACAACCGGGGGCCTGAGCGTCTTCGGCCGCCGCCTCCG
GCGGGCTACGGTGGGTTCCGCGGGGCGAAAGGAGGCGTTTGGGGGGGAGG
ACGGTGGGGAGGGGGAGCCCTTGCTGGCTGGTGAATCTCTTCACGCGCCT
GGGCCGTCGCTGTCGGTGTCTGAGCCGGCCGGGAGAAGTGACGTGGAGGC
AGGGGCAGTGGGGGGCGCTGATGGCCCCGTGTCTTCGAGCAACTCCAGTT
CTTTTGGGCGCGAACTCTGGGCGGGATCCTCACGGGAGCCCTGTGCAGCG
GCGCACTGTCCCTGTCGGCACCCTGCCCGCGCTCCTCCTCGTGCGAGCGG
TGCAGCGCTCTCCCGGTATCGAGACATTTCTCGGAAATTTCCACCAAGGG
GGGGGACTTGAGCAGCAACTCTTCCAGCACCGTCGCCACCGGCCTCAGGC
GCGCAGACTCCCGGTGGCACCTGGGCCTGGTGCTCGGCCTCCTGATCGGC
GGCCTGGGTTACGGCCGGGGAGGGGGGGGCTCCGGCGCTGCGAAGGGCGG
GGGGGAGGGGGCGTCGTGGTTTGAGGACAAACCCGCGTTCGTGGCGTGCG
CTGCCGCCTGCTCGGCGGTACTGTCCGTCGCCGTGGTGGCCTGGCGGCGC
ACCGGCAACGACGCCGAGCAAGCAAGTGAAACCGTCGCCGGGCGCGGCGG
AACAACCGGGGGCCTGAGCGTCTTCGGCCGCCGCCTCCGGCGGGCTACGG
TGGGTTCCGCGGGGCGAAAGGAGGCGTTTGGGGGGGAGGACGGTGGGGAG
GGGGAGCCCTTGCTGGCTGGTGAATCTCTTCACGCGCCTGGGCCGTCGCT
GTCGGTGTCTGAGCCGGCCGGGAGAAGTGACGTGGAGGCAGGGGCAGTGG
GGGGCGCTGATGGCCCCGTGTCTTCGAGGTATATCGCCGCCTGCAAGGGA
AACGCGGTCGCCGCGAAGGCGATGTGGCACGAAACCATCAAGTATATCGC
CGCCTGCAAGGGAAACGCGGTCGCCGCGAAGGCGATGTGGCACGAAACCA
TCAAGTGGCGAGCGGACACAGGAGCCGAACGGTCGCTTTCCACCCCCCAG
CCGACCCTGGACATCATCAAGCAGTGCTACCCTTACTTCGTGCACGGACG
TTCCAAGAAGGGCGAGGTAGTGGTCTACGAGCAAACGGGGAAGATGCAGT
TCGGCCGCCTCGCGGATGCCGGGGTATCGCCGTTCGATATGCAGGTGGCG
AGCGGACACAGGAGCCGAACGGTCGCTTTCCACCCCCCAGCCGACCCTGG
ACATCATCAAGCAGTGCTACCCTTACTTCGTGCACGGACGTTCCAAGAAG
GGCGAGGTAGTGGTCTACGAGCAAACGGGGAAGATGCAGTTCGGCCGCCT
CGCGGATGCCGGGGTATCGCCGTTCGATATGCAGATGCACTACTCGTTCT
TCAACGACTTTGTTTTCAGCAAGCTCAACGCCGAGGACGACGACGATGCT
AAGCTCATGACCGTGCTGGACGTCGGGGAGCTACGGCTGGCGACCATCAA
GAACAACACGGTCGTTACAAAATGCACTACTCGTTCTTCAACGACTTTGT
TTTCAGCAAGCTCAACGCCGAGGACGACGACGATGCTAAGCTCATGACCG
TGCTGGACGTCGGGGAGCTACGGCTGGCGACCATCAAGAACAACACGGTC
GTTACAAAGTACCTCGCCGCCACGGCGGAGGTGATGCAGAAGCACTACCC
CGAGCGGCAGAGCCGCATCCTTGTGGTCAACGCTCCGTGGTGGTTCGCGG
GCATCTGGAAAGGGGTGTCGGGCGTCCTGTCGTCGGGGACCCAGGCGAAG
CTGCAGATCAGAGGGAAGAACTTCTTGCCGACGCTGCTGGAGCACGTTGA
CGCTTCGCAGGTGTGTGGTGGTGGTGTGTGGCCGACGTAGGTACCTCGCC
GCCACGGCGGAGGTGATGCAGAAGCACTACCCCGAGCGGCAGAGCCGCAT
CCTTGTGGTCAACGCTCCGTGGTGGTTCGCGGGCATCTGGAAAGGGGTGT
CGGGCGTCCTGTCGTCGGGGACCCAGGCGAAGCTGCAGATCAGAGGGAAG
AACTTCTTGCCGACGCTGCTGGAGCACGTTGACGCTTCGCAGGTGTGTGG
TGGTGGTGTGTGGCCGACGTAG
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