prot_E-fasciculatus_F_contig13208.2418.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13208.2418.1 vs. uniprot
Match: A0A6H5JAF8_9PHAE (DNA-directed RNA polymerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAF8_9PHAE) HSP 1 Score: 267 bits (682), Expect = 1.470e-81 Identity = 137/173 (79.19%), Postives = 143/173 (82.66%), Query Frame = 0
Query: 3 HPYLLANKIRFLRRKGMVGEFVSVYLHSVRRAVYIASDGGRVCRPLLVVENGRTRLTKTHLDQMALGAVLFSRCSLISVEYVRIRCIKNLICVFLPSFSRAPPQGVVEYVDVNEENNCLVGLADGDLTLNHTHLEIDPLTLLGVVAGLIPYPHHNQSPRNTYQCAMGKQARRG 175
HP+LLANKIRFLRRKGMVGEFVSVYLHSVRRAVYIASDGGRVCRPLLVVENGRTRLTKTHLDQMALG + +++LI QGVVEYVDVNEENNCLVGLADGDLT+NHTHLEIDPLTLLGVVAGLIPYPHHNQSPRNTYQCAMGKQARRG
Sbjct: 619 HPFLLANKIRFLRRKGMVGEFVSVYLHSVRRAVYIASDGGRVCRPLLVVENGRTRLTKTHLDQMALGVL----------------SLQDLI-----------KQGVVEYVDVNEENNCLVGLADGDLTINHTHLEIDPLTLLGVVAGLIPYPHHNQSPRNTYQCAMGKQARRG 764
BLAST of mRNA_E-fasciculatus_F_contig13208.2418.1 vs. uniprot
Match: A0A835Z565_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z565_9STRA) HSP 1 Score: 219 bits (559), Expect = 1.640e-62 Identity = 111/169 (65.68%), Postives = 127/169 (75.15%), Query Frame = 0
Query: 4 PYLLANKIRFLRRKGMVGEFVSVYLHSVRRAVYIASDGGRVCRPLLVVENGRTRLTKTHLDQMALGAVLFSRCSLISVEYVRIRCIKNLICVFLPSFSRAPPQGVVEYVDVNEENNCLVGLADGDLTLNHTHLEIDPLTLLGVVAGLIPYPHHNQSPRNTYQCAMGKQA 172
P L ++RFLRR+GMVGEFVSVYLH V+RAVYIASDGGRVCRPLLVVENG+T LT+ H+ Q+A G +R +K+L+ + GVVEYVDVNEENNCL+ L+D DLT HTHLE+DPLTLLGVVAGLIPYPHHNQSPRNTYQCAMGKQA
Sbjct: 592 PELFVRRLRFLRRQGMVGEFVSVYLHDVQRAVYIASDGGRVCRPLLVVENGQTLLTERHMAQLASG----------------VRGLKDLLRI-----------GVVEYVDVNEENNCLIALSDADLTERHTHLEVDPLTLLGVVAGLIPYPHHNQSPRNTYQCAMGKQA 733
BLAST of mRNA_E-fasciculatus_F_contig13208.2418.1 vs. uniprot
Match: A0A7S4DBE3_HETAK (DNA-directed RNA polymerase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBE3_HETAK) HSP 1 Score: 195 bits (495), Expect = 7.260e-57 Identity = 98/172 (56.98%), Postives = 115/172 (66.86%), Query Frame = 0
Query: 1 YRHPYLLANKIRFLRRKGMVGEFVSVYLHSVRRAVYIASDGGRVCRPLLVVENGRTRLTKTHLDQMALGAVLFSRCSLISVEYVRIRCIKNLICVFLPSFSRAPPQGVVEYVDVNEENNCLVGLADGDLTLNHTHLEIDPLTLLGVVAGLIPYPHHNQSPRNTYQCAMGKQA 172
+R P + RFLRR+G+V EFVSVYLH+ +RAVY+A+DGGR+CRPLLVVE GR LT H++Q+ G L S GVVEYVDVNEENNC + L + +LT HTH+EIDPLTLLGVVAGL+PYPHHNQSPRNTYQCAMGKQA
Sbjct: 175 HRRPREFVRRFRFLRRQGLVTEFVSVYLHAPQRAVYLAADGGRLCRPLLVVEGGRPLLTALHMEQLRAG---------------------------LTSLGALLNDGVVEYVDVNEENNCYIALKEEELTPQHTHVEIDPLTLLGVVAGLVPYPHHNQSPRNTYQCAMGKQA 319
BLAST of mRNA_E-fasciculatus_F_contig13208.2418.1 vs. uniprot
Match: A0A6U4JF41_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4JF41_9STRA) HSP 1 Score: 201 bits (512), Expect = 3.620e-56 Identity = 101/169 (59.76%), Postives = 121/169 (71.60%), Query Frame = 0
Query: 4 PYLLANKIRFLRRKGMVGEFVSVYLHSVRRAVYIASDGGRVCRPLLVVENGRTRLTKTHLDQMALGAVLFSRCSLISVEYVRIRCIKNLICVFLPSFSRAPPQGVVEYVDVNEENNCLVGLADGDLTLNHTHLEIDPLTLLGVVAGLIPYPHHNQSPRNTYQCAMGKQA 172
P LA ++RFLRR+G VGEFVS+YLHS +RAVYIASDGGRVCRPLLVVE GR RLT H+ +++G + + +L+ GVVEYVDVNEENNC + L + +LT +HTHLEIDPLT++GVVAGLIP+PHHNQSPRNTYQCAMGKQA
Sbjct: 558 PQDLARRLRFLRRRGCVGEFVSIYLHSGKRAVYIASDGGRVCRPLLVVEGGRLRLTTNHIRHLSMG----------------LGTLPDLLA-----------DGVVEYVDVNEENNCFIALKEEELTPSHTHLEIDPLTIMGVVAGLIPFPHHNQSPRNTYQCAMGKQA 699
BLAST of mRNA_E-fasciculatus_F_contig13208.2418.1 vs. uniprot
Match: A0A7S2WH87_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WH87_9STRA) HSP 1 Score: 197 bits (502), Expect = 8.170e-55 Identity = 98/169 (57.99%), Postives = 122/169 (72.19%), Query Frame = 0
Query: 4 PYLLANKIRFLRRKGMVGEFVSVYLHSVRRAVYIASDGGRVCRPLLVVENGRTRLTKTHLDQMALGAVLFSRCSLISVEYVRIRCIKNLICVFLPSFSRAPPQGVVEYVDVNEENNCLVGLADGDLTLNHTHLEIDPLTLLGVVAGLIPYPHHNQSPRNTYQCAMGKQA 172
P L + +R LRR+G VGEFVSVYLHSV+RAVY+ASDGGRVCRPLLVV+NG+ L + H+ Q+A G +R +K+L+ + +VEY+DVNEENNCL+ L+D LT HTH+EIDPLT++GVV+GLIP+PHHNQSPRNTYQCAMGKQA
Sbjct: 555 PRLFVDMLRALRRRGRVGEFVSVYLHSVQRAVYVASDGGRVCRPLLVVKNGQPMLRQIHMQQLAAG----------------LRTLKDLM-----------REEIVEYIDVNEENNCLIALSDRMLTPEHTHMEIDPLTIMGVVSGLIPFPHHNQSPRNTYQCAMGKQA 696
BLAST of mRNA_E-fasciculatus_F_contig13208.2418.1 vs. uniprot
Match: A0A7S2DCI5_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DCI5_9STRA) HSP 1 Score: 193 bits (490), Expect = 2.900e-53 Identity = 95/169 (56.21%), Postives = 114/169 (67.46%), Query Frame = 0
Query: 4 PYLLANKIRFLRRKGMVGEFVSVYLHSVRRAVYIASDGGRVCRPLLVVENGRTRLTKTHLDQMALGAVLFSRCSLISVEYVRIRCIKNLICVFLPSFSRAPPQGVVEYVDVNEENNCLVGLADGDLTLNHTHLEIDPLTLLGVVAGLIPYPHHNQSPRNTYQCAMGKQA 172
P R LRRKG+VGEFVSVYLHSV A+Y+A+DGGRVCRPLLV G+ RLT+ H+ Q+ LG L S + +G+VEY+DVNEENNC+V L++ +LT HTHLEIDPLTL+GVV+GLIP+PHHNQSPRNTY CAMGKQA
Sbjct: 426 PKRFVKYFRTLRRKGLVGEFVSVYLHSVHHAIYVATDGGRVCRPLLVCTKGKPRLTQVHMSQLGLG---------------------------LRSLTDLMKEGIVEYMDVNEENNCMVALSEKELTPEHTHLEIDPLTLMGVVSGLIPFPHHNQSPRNTYTCAMGKQA 567
BLAST of mRNA_E-fasciculatus_F_contig13208.2418.1 vs. uniprot
Match: I2CNY0_NANGC (DNA-directed RNA polymerase subunit beta n=3 Tax=Monodopsidaceae TaxID=425072 RepID=I2CNY0_NANGC) HSP 1 Score: 191 bits (484), Expect = 2.210e-52 Identity = 99/169 (58.58%), Postives = 113/169 (66.86%), Query Frame = 0
Query: 4 PYLLANKIRFLRRKGMVGEFVSVYLHSVRRAVYIASDGGRVCRPLLVVENGRTRLTKTHLDQMALGAVLFSRCSLISVEYVRIRCIKNLICVFLPSFSRAPPQGVVEYVDVNEENNCLVGLADGDLTLNHTHLEIDPLTLLGVVAGLIPYPHHNQSPRNTYQCAMGKQA 172
P +R LRRKG+V EFVSV LH V+RA+YIA+DGGRVCRPLLV E G RLT + Q++ G + + IRC GVVEYVDVNEENNCL+ LA LT+ HTH+EIDPLT+LGVVAGLIPYPHHNQSPRNTYQCAMGKQA
Sbjct: 590 PLRFVRLLRLLRRKGLVAEFVSVCLHEVQRAIYIATDGGRVCRPLLVCEKGVPRLTNMMMRQLSSGLLTLAEL---------IRC------------------GVVEYVDVNEENNCLIALAQTQLTVKHTHMEIDPLTVLGVVAGLIPYPHHNQSPRNTYQCAMGKQA 731
BLAST of mRNA_E-fasciculatus_F_contig13208.2418.1 vs. uniprot
Match: A0A813AD60_9DINO (DNA-directed RNA polymerase n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813AD60_9DINO) HSP 1 Score: 177 bits (449), Expect = 6.860e-52 Identity = 89/174 (51.15%), Postives = 116/174 (66.67%), Query Frame = 0
Query: 1 YRHPYLLANKIRFLRRKGMVGEFVSVYLHSVRRAVYIASDGGRVCRPLLVVENG--RTRLTKTHLDQMALGAVLFSRCSLISVEYVRIRCIKNLICVFLPSFSRAPPQGVVEYVDVNEENNCLVGLADGDLTLNHTHLEIDPLTLLGVVAGLIPYPHHNQSPRNTYQCAMGKQA 172
+R P LA +R LRR G++GEFVS+++H V +AV +A DGGR+CRPL++V+ +R+T H+D++ G F+ SL+S + +EYVDVNEENNCL+ L + D+ N TH+EIDPLT+LGVVAGLIPYPHHNQSPRNTYQCAMGKQA
Sbjct: 72 HREPNTLAANMRLLRRNGLIGEFVSIFVHDVHKAVNVACDGGRICRPLIIVDQATQESRITADHIDEITNGTRDFN--SLLS-------------------------ESCIEYVDVNEENNCLIALREEDIGPNTTHVEIDPLTILGVVAGLIPYPHHNQSPRNTYQCAMGKQA 218
BLAST of mRNA_E-fasciculatus_F_contig13208.2418.1 vs. uniprot
Match: A0A5A8CMB6_CAFRO (DNA-directed RNA polymerase subunit beta n=3 Tax=Sar TaxID=2698737 RepID=A0A5A8CMB6_CAFRO) HSP 1 Score: 188 bits (477), Expect = 1.990e-51 Identity = 97/172 (56.40%), Postives = 116/172 (67.44%), Query Frame = 0
Query: 1 YRHPYLLANKIRFLRRKGMVGEFVSVYLHSVRRAVYIASDGGRVCRPLLVVENGRTRLTKTHLDQMALGAVLFSRCSLISVEYVRIRCIKNLICVFLPSFSRAPPQGVVEYVDVNEENNCLVGLADGDLTLNHTHLEIDPLTLLGVVAGLIPYPHHNQSPRNTYQCAMGKQA 172
+R PY A R RR G++GEFVSVY+H RAV IASDGGR+CRP++VVE G+ RLT H+ +A G V F+ SL+S GV+EY+DVNEENNCL+ L + D+T THLEIDP+T+LGVVAGLIPYPHHNQSPRNTYQCAMGKQA
Sbjct: 846 HRRPYDFAKAFRIFRRAGILGEFVSVYVHDGLRAVNIASDGGRICRPVVVVEQGQPRLTARHMRDLAAGLVDFN--SLLST-------------------------GVLEYLDVNEENNCLIALREADITRATTHLEIDPVTILGVVAGLIPYPHHNQSPRNTYQCAMGKQA 990
BLAST of mRNA_E-fasciculatus_F_contig13208.2418.1 vs. uniprot
Match: A0A482SPL4_9ARCH (DNA-directed RNA polymerase subunit beta n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SPL4_9ARCH) HSP 1 Score: 186 bits (472), Expect = 5.170e-51 Identity = 92/172 (53.49%), Postives = 117/172 (68.02%), Query Frame = 0
Query: 1 YRHPYLLANKIRFLRRKGMVGEFVSVYLHSVRRAVYIASDGGRVCRPLLVVENGRTRLTKTHLDQMALGAVLFSRCSLISVEYVRIRCIKNLICVFLPSFSRAPPQGVVEYVDVNEENNCLVGLADGDLTLNHTHLEIDPLTLLGVVAGLIPYPHHNQSPRNTYQCAMGKQA 172
+ P L +IR LRR+G +GEFVSVYL+ +++ VYIASDGGRVCRPLL+++ G+ +L + H++Q LG V LP QGV+EYVDVNEENNC + L + ++TL HTH+EIDP T+LG+VAGL+PYPHHNQSPRNTYQCAMGKQA
Sbjct: 340 HERPNELVERIRSLRRRGHIGEFVSVYLNVIQKGVYIASDGGRVCRPLLILDQGKLKLEQKHIEQ--LGKT-----------------------VSLPDLLA---QGVMEYVDVNEENNCFIALKESEITLEHTHMEIDPSTILGIVAGLVPYPHHNQSPRNTYQCAMGKQA 483 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13208.2418.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_E-fasciculatus_F_contig13208.2418.1 ID=prot_E-fasciculatus_F_contig13208.2418.1|Name=mRNA_E-fasciculatus_F_contig13208.2418.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=211bpback to top |