prot_E-fasciculatus_F_contig13198.2409.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13198.2409.1
Unique Nameprot_E-fasciculatus_F_contig13198.2409.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length219
Homology
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BLAST of mRNA_E-fasciculatus_F_contig13198.2409.1 vs. uniprot
Match: D7FQW3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQW3_ECTSI)

HSP 1 Score: 263 bits (672), Expect = 2.650e-85
Identity = 163/216 (75.46%), Postives = 166/216 (76.85%), Query Frame = 0 
Query:    1 MMTADARLAMLIVVFLFAATXXXXXXXXXXXXXXXXNLHSRQPLASCFVGPAVAAGSIATRSERTPAASSKEQQQQHGRPTTADKDTYSPLARRVLLRRALARPKVRAGAGSSSPAATHSASRTAADVGSLFRLEVAQRMREMKLMTQPGVGPLAPVAGPXXXXXXXXLAETLATNKLEGDAAALEHQISLLSGRIASIADHLKVKSGAAVVEKGI 216
            M TADARLAMLIVVFLF AT                     +PL SCFVGPAVAAGSIATRSE TPAASSKEQQQQHGRPTT  KDT SPLARRVLLRRALARPK RAGA SSSPAAT   SRTAADVGSLFRLEVAQRM+EMKLMTQPGVGPLAPVAGP        LAETLA NKLEGDAAALEHQISLLS RIASIADHLK     AV  KG+
Sbjct:    1 MTTADARLAMLIVVFLFTATVATAALGADGSD------RRSRPLTSCFVGPAVAAGSIATRSESTPAASSKEQQQQHGRPTTG-KDTCSPLARRVLLRRALARPKARAGAESSSPAATRPGSRTAADVGSLFRLEVAQRMKEMKLMTQPGVGPLAPVAGPAAAAAS--LAETLAKNKLEGDAAALEHQISLLSARIASIADHLKTTPTDAVSRKGL 207
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13198.2409.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FQW3_ECTSI2.650e-8575.46Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..218
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.861
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13198contigE-fasciculatus_F_contig13198:1054..3682 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13198.2409.1mRNA_E-fasciculatus_F_contig13198.2409.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13198 1054..3682 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13198.2409.1 ID=prot_E-fasciculatus_F_contig13198.2409.1|Name=mRNA_E-fasciculatus_F_contig13198.2409.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=219bp
MMTADARLAMLIVVFLFAATAATAALGADSSSSSSSNLHSRQPLASCFVG
PAVAAGSIATRSERTPAASSKEQQQQHGRPTTADKDTYSPLARRVLLRRA
LARPKVRAGAGSSSPAATHSASRTAADVGSLFRLEVAQRMREMKLMTQPG
VGPLAPVAGPAAAAAAASLAETLATNKLEGDAAALEHQISLLSGRIASIA
DHLKVKSGAAVVEKGISS*
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