mRNA_E-fasciculatus_F_contig13187.2404.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13187.2404.1 vs. uniprot
Match: D8LQW6_ECTSI (Beta-glucosidase, family GH1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQW6_ECTSI) HSP 1 Score: 161 bits (407), Expect = 1.020e-45 Identity = 74/79 (93.67%), Postives = 75/79 (94.94%), Query Frame = 3
Query: 3 WHHLETGADELRFPEGFLWGVSTAAHQIEGGNDNNQWSRWENTER---QPPTVKGGAKSGKACEHWDRLGEDLGLIQGL 230
WHHL+TGADELRFPEGFLWGVSTAAHQIEGGNDNNQWSRWENTER QPPTVKGGAKSGKACEHWDRLGEDL LIQGL
Sbjct: 51 WHHLDTGADELRFPEGFLWGVSTAAHQIEGGNDNNQWSRWENTERPEGQPPTVKGGAKSGKACEHWDRLGEDLRLIQGL 129
BLAST of mRNA_E-fasciculatus_F_contig13187.2404.1 vs. uniprot
Match: A0A7C2TT33_9BACT (Glycosyl hydrolase family protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A7C2TT33_9BACT) HSP 1 Score: 92.8 bits (229), Expect = 2.130e-20 Identity = 41/78 (52.56%), Postives = 53/78 (67.95%), Query Frame = 3
Query: 3 WHHLETGADELRFPEGFLWGVSTAAHQIEGGNDNNQWSRWENT--ERQPPTVKGGAKSGKACEHWDRLGEDLGLIQGL 230
W ++T ++ FP GFLWGV+TAAHQ+EGG DNN WS WE E P +K G K+G AC+HW+R ED+ L+Q L
Sbjct: 32 WQKIDTS--KIHFPAGFLWGVATAAHQVEGGCDNNNWSEWETARDENGKPRIKNGQKAGLACDHWNRYKEDIALMQEL 107
BLAST of mRNA_E-fasciculatus_F_contig13187.2404.1 vs. uniprot
Match: A0A7Y5G079_9BACT (Glycoside hydrolase family 1 protein (Fragment) n=1 Tax=candidate division KSB1 bacterium TaxID=2172550 RepID=A0A7Y5G079_9BACT) HSP 1 Score: 90.1 bits (222), Expect = 1.020e-19 Identity = 40/78 (51.28%), Postives = 51/78 (65.38%), Query Frame = 3
Query: 3 WHHLETGADELRFPEGFLWGVSTAAHQIEGGNDNNQWSRWENT--ERQPPTVKGGAKSGKACEHWDRLGEDLGLIQGL 230
W E +++RFP FLWGV+TAAHQ+EG DNN WS WEN P +K G K+G AC+HW+R ED+ L+Q L
Sbjct: 31 WDWDEIDVNDIRFPSNFLWGVATAAHQVEGNCDNNNWSAWENAVDASGQPRIKHGQKAGLACDHWNRYREDIKLMQAL 108
BLAST of mRNA_E-fasciculatus_F_contig13187.2404.1 vs. uniprot
Match: A0A7Y5FKC5_9BACT (Glycoside hydrolase family 1 protein n=1 Tax=candidate division KSB1 bacterium TaxID=2172550 RepID=A0A7Y5FKC5_9BACT) HSP 1 Score: 90.1 bits (222), Expect = 2.030e-19 Identity = 39/78 (50.00%), Postives = 54/78 (69.23%), Query Frame = 3
Query: 3 WHHLETGADELRFPEGFLWGVSTAAHQIEGGNDNNQWSRWENT--ERQPPTVKGGAKSGKACEHWDRLGEDLGLIQGL 230
W H++T +RFP+ FLWGV+T+AHQ+EGG DNN WS WE + P +K G ++G+ACEHW R ED+ L++ L
Sbjct: 33 WDHIDT--KRIRFPQHFLWGVATSAHQVEGGCDNNNWSAWEQSVDASGQPRIKQGQRAGRACEHWQRYREDIQLMKAL 108
BLAST of mRNA_E-fasciculatus_F_contig13187.2404.1 vs. uniprot
Match: A0A3A0DJS8_9BACT (Glycoside hydrolase family 1 protein n=2 Tax=candidate division KSB1 bacterium TaxID=2172550 RepID=A0A3A0DJS8_9BACT) HSP 1 Score: 89.0 bits (219), Expect = 5.200e-19 Identity = 39/78 (50.00%), Postives = 51/78 (65.38%), Query Frame = 3
Query: 3 WHHLETGADELRFPEGFLWGVSTAAHQIEGGNDNNQWSRWENT--ERQPPTVKGGAKSGKACEHWDRLGEDLGLIQGL 230
W E ++++FP FLWGV+TAAHQ+EG DNN WS WEN P +K G K+G AC+HW+R ED+ L+Q L
Sbjct: 31 WDWDEIDVNDIKFPSNFLWGVATAAHQVEGNCDNNNWSAWENAVDASGQPRIKHGQKAGLACDHWNRYREDIKLMQAL 108
BLAST of mRNA_E-fasciculatus_F_contig13187.2404.1 vs. uniprot
Match: A0A7Z9Q278_9BACT (Glycoside hydrolase family 1 protein n=1 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A7Z9Q278_9BACT) HSP 1 Score: 87.8 bits (216), Expect = 1.340e-18 Identity = 44/78 (56.41%), Postives = 52/78 (66.67%), Query Frame = 3
Query: 3 WHHLETGADELRFPEGFLWGVSTAAHQIEGGNDNNQWSRWENT--ERQPPTVKGGAKSGKACEHWDRLGEDLGLIQGL 230
W ET L FP GF+WGV+TAAHQ+EGG NN WS WENT E P + G KSG AC+HW+R ED+GLI+ L
Sbjct: 32 WEKEETKT--LSFPPGFVWGVATAAHQVEGGCTNN-WSEWENTPDENGNPRIHKGNKSGMACDHWNRYREDIGLIESL 106
BLAST of mRNA_E-fasciculatus_F_contig13187.2404.1 vs. uniprot
Match: A0A0G4I1C0_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I1C0_9ALVE) HSP 1 Score: 87.0 bits (214), Expect = 2.760e-18 Identity = 34/68 (50.00%), Postives = 49/68 (72.06%), Query Frame = 3
Query: 27 DELRFPEGFLWGVSTAAHQIEGGNDNNQWSRWENTERQPPTVKGGAKSGKACEHWDRLGEDLGLIQGL 230
D L FP+ F+WG +T++HQ+EGG DNN W RWE + PP +K AK G AC+HW+R+ +D+ L++ L
Sbjct: 70 DCLEFPDDFVWGTATSSHQVEGGCDNNNWFRWEMEDHDPPRIKTKAKCGDACDHWNRVEQDIQLMRNL 137
BLAST of mRNA_E-fasciculatus_F_contig13187.2404.1 vs. uniprot
Match: A0A7S4D568_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D568_HETAK) HSP 1 Score: 86.3 bits (212), Expect = 5.420e-18 Identity = 40/77 (51.95%), Postives = 53/77 (68.83%), Query Frame = 3
Query: 3 WHHLETGADELRFPEGFLWGVSTAAHQIEGGNDNNQWSRWENTE-RQPPTVKGGAKSGKACEHWDRLGEDLGLIQGL 230
W ++T +L FP FLWG STA+HQIEGG DNN WS +E + + P +K G + G AC+HW+R+ EDLGL+Q L
Sbjct: 141 WSKIDTR--KLAFPRDFLWGTSTASHQIEGGCDNNNWSAFERRQVKGEPAIKNGDRVGAACDHWNRVDEDLGLMQEL 215
BLAST of mRNA_E-fasciculatus_F_contig13187.2404.1 vs. uniprot
Match: A0A7C1BLS1_9BACT (Glycosyl hydrolase family protein n=4 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A7C1BLS1_9BACT) HSP 1 Score: 84.7 bits (208), Expect = 1.710e-17 Identity = 38/70 (54.29%), Postives = 51/70 (72.86%), Query Frame = 3
Query: 27 DELRFPEGFLWGVSTAAHQIEGGNDNNQWSRWENT--ERQPPTVKGGAKSGKACEHWDRLGEDLGLIQGL 230
++L FP+GF+WGV+T++HQ+EG DNN W WEN+ E P VK G KSG AC+HW+R ED+ LI+ L
Sbjct: 35 EDLLFPDGFIWGVATSSHQVEGYCDNNDWYIWENSIDEVGKPRVKNGQKSGVACDHWNRYREDIELIKEL 104
BLAST of mRNA_E-fasciculatus_F_contig13187.2404.1 vs. uniprot
Match: A0A2M7U9C8_9BACT (Glycoside hydrolase family 1 protein n=4 Tax=Candidatus Marinimicrobia TaxID=62680 RepID=A0A2M7U9C8_9BACT) HSP 1 Score: 84.7 bits (208), Expect = 1.710e-17 Identity = 41/78 (52.56%), Postives = 50/78 (64.10%), Query Frame = 3
Query: 3 WHHLETGADELRFPEGFLWGVSTAAHQIEGGNDNNQWSRWEN--TERQPPTVKGGAKSGKACEHWDRLGEDLGLIQGL 230
W T E+ FP+ FLWGV+TAAHQ+EGG NN WSRWEN T P +K G +G ACE+W R ED+ LI+ L
Sbjct: 38 WDWEWTDTSEVAFPKRFLWGVATAAHQVEGGCTNNNWSRWENGATTDGSPHIKTGEVTGAACENWTRYPEDIELIREL 115 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13187.2404.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13187.2404.1 >prot_E-fasciculatus_F_contig13187.2404.1 ID=prot_E-fasciculatus_F_contig13187.2404.1|Name=mRNA_E-fasciculatus_F_contig13187.2404.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=73bp GGTTWRPVPTSCGSRRVSCGAFRPRRTRSRGATTTTSGADGRTPRGSRQRback to top mRNA from alignment at E-fasciculatus_F_contig13187:1340..2246+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13187.2404.1 ID=mRNA_E-fasciculatus_F_contig13187.2404.1|Name=mRNA_E-fasciculatus_F_contig13187.2404.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=907bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13187:1340..2246+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13187:1340..2246+ >mRNA_E-fasciculatus_F_contig13187.2404.1 ID=mRNA_E-fasciculatus_F_contig13187.2404.1|Name=mRNA_E-fasciculatus_F_contig13187.2404.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=438bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13187:1340..2246+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |