prot_E-fasciculatus_F_contig13181.2401.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13181.2401.1
Unique Nameprot_E-fasciculatus_F_contig13181.2401.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length216
Homology
BLAST of mRNA_E-fasciculatus_F_contig13181.2401.1 vs. uniprot
Match: D7G0A0_ECTSI (Vacuolar protein sorting-associated protein 54 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0A0_ECTSI)

HSP 1 Score: 381 bits (978), Expect = 3.900e-122
Identity = 205/216 (94.91%), Postives = 205/216 (94.91%), Query Frame = 0
Query:    1 MERSVSQLLSVRREHNCTKLDVDELKHLWDITVAFIQSVERLSGCNGYKLRSTLLSQAKAFVEARHEANKQTLVKRLDAEKWAQADVTPERQAVLDRLSSGQVFRPSAPAATANGNDGKEGSGVGGGGSSSYGNGGLRLPGDPPAQPNFVGGARSGGRKGGRAERRREAGVGGASFKAVGSALLVAEMSANFLQFADHFPTIGTDILTRLGELLRV 216
            MERSVSQLLSVRREHNCTKLDVDELKHLWDITVAFIQSVERLSGCNGYKLRSTLLSQAKAFVEARHEANKQTLVKRLDAEKW QADVTPERQAVLDRLSSGQVFRPS  AA ANG DGKEGSG GGG  S Y NGGLRLPGDPPAQPNFVGGARSGGRKGGRAERRREA VGGASFKAVGSALLVAEMSANFLQFADHFPTIGTDILTRLGELLRV
Sbjct:  637 MERSVSQLLSVRREHNCTKLDVDELKHLWDITVAFIQSVERLSGCNGYKLRSTLLSQAKAFVEARHEANKQTLVKRLDAEKWTQADVTPERQAVLDRLSSGQVFRPSVSAANANGTDGKEGSGAGGG--SGYDNGGLRLPGDPPAQPNFVGGARSGGRKGGRAERRREAVVGGASFKAVGSALLVAEMSANFLQFADHFPTIGTDILTRLGELLRV 850          
BLAST of mRNA_E-fasciculatus_F_contig13181.2401.1 vs. uniprot
Match: A0A7S2S5D4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S5D4_9STRA)

HSP 1 Score: 130 bits (327), Expect = 4.140e-32
Identity = 90/218 (41.28%), Postives = 122/218 (55.96%), Query Frame = 0
Query:    2 ERSVSQLLSVRREHNCTKLDVDELKHLWDITVAFIQSVERLSGCNGYKLRSTLLSQAKAFVEARHEANKQTLVKRLDAEKWAQADVTPERQAVLDRLSSGQVFRP-SAPAATANGNDGKEGSGVGGGGSSSYGNGGLRLPGDPPAQPNFVGGARSGGRKGGRAERRR--EAGVGGASFKAVGSALLVAEMSANFLQFADHFPTIGTDILTRLGELLRV 216
            ++++S LL +R+E + T L ++ELK LW  T  F+Q VE+LSG + Y LRSTLL+QAKAF+E +HEA   +LV  LD+EKWAQADV+ ERQA LDRLS+GQ F P S P                           L+               +S   K  +  +R   EA V G+ +K V S LL+ EM  + L  A HFP + TD+L R+ EL+R+
Sbjct:   55 QKTISNLLVMRKEVHTT-LSLEELKELWSATFEFLQLVEKLSGRSCYGLRSTLLAQAKAFLEHKHEAQLASLVATLDSEKWAQADVSSERQAALDRLSNGQAFLPRSYPK--------------------------LQTQTSXXXXXXXXATLQSSSAKRAKGTKREVGEAMVEGSRYKVVWSVLLLMEMVMSLLATAAHFPMLATDVLQRIVELVRL 245          
BLAST of mRNA_E-fasciculatus_F_contig13181.2401.1 vs. uniprot
Match: A0A7S2FL57_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FL57_9STRA)

HSP 1 Score: 130 bits (326), Expect = 6.230e-32
Identity = 88/221 (39.82%), Postives = 128/221 (57.92%), Query Frame = 0
Query:    2 ERSVSQLLSVRREHNCTKLDVDELKHLWDITVAFIQSVERLSGCNGYKLRSTLLSQAKAFVEARHEANKQTLVKRLDAEKWAQADVTPERQAVLDRLSSGQVFRPSA---PAATANGNDGKEGSGVGGGGSSSYGNGGLRLPGDPPAQPNFVGGARSGGRKGGRAERRRE---AGVGGASFKAVGSALLVAEMSANFLQFADHFPTIGTDILTRLGELLRV 216
            ++SV  LL +R++ + T L ++ELK +W++T  F+ ++ER+SG + Y LRST+L+QAKAF+E + E    +LV  LD+EKW QADV+P+RQ  +DRLSSGQ F P     P    N +            +++   G ++ P +   +    G    GGR       RRE   A V G+SFK V S LL+ EM    L  A HFP + TD+L R+ EL+R+
Sbjct:   41 QKSVGNLLVMRKDVHTT-LTIEELKEMWNVTFEFLTAMERISGRSCYALRSTMLAQAKAFLEHKQEVQMASLVATLDSEKWTQADVSPQRQQAIDRLSSGQAFLPGTLVTPTNKPNDHXXXXXXXXDNPVAATAAAGEVKRPSETEGRAVTTGRTDRGGRS------RRELNDASVDGSSFKVVWSVLLLIEMVTAHLAIAAHFPMLATDVLQRVVELVRL 254          
BLAST of mRNA_E-fasciculatus_F_contig13181.2401.1 vs. uniprot
Match: A0A7S1TZU2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZU2_9STRA)

HSP 1 Score: 126 bits (317), Expect = 6.310e-30
Identity = 86/219 (39.27%), Postives = 116/219 (52.97%), Query Frame = 0
Query:    2 ERSVSQLLSVRREHNCTKLDVDELKHLWDITVAFIQSVERLSGCNGYKLRSTLLSQAKAFVEARHEANKQTLVKRLDAEKWAQADVTPERQAVLDRLSSGQVFRPSAPAATANGNDGKEGSGVGGGGSSSYGNGGLRLPGDPPAQ----PNFVGGARSGGRKGGRAERRREAGVGGASFKAVGSALLVAEMSANFLQFADHFPTIGTDILTRLGELLRV 216
            +RS+  L+ +R+E N   L +++LK LWD  + FI  VE+L+G  GY+LR TLLSQAK F+E + +  K +LV  LDAE+W +ADVTPERQA L+RL SG  F   A  A +                         L G P +     P    G    GRK     RR +  +GG  FK V S LL+ EMS + L     FP +  D+L RL EL+++
Sbjct:  548 QRSIVSLILMRKEQNFC-LALEDLKALWDTVMRFIMQVEKLAGVTGYELRGTLLSQAKGFLEKKVQVQKASLVSTLDAERWVRADVTPERQAALERLVSGHAFLRVADLAKSE----------------------SPLAGSPVSSNAGSPTAANGDAHTGRK-----RREDVVLGGRRFKVVWSVLLLLEMSTDLLSILAIFPALVVDVLQRLLELVKL 738          
BLAST of mRNA_E-fasciculatus_F_contig13181.2401.1 vs. uniprot
Match: A0A7S2XS08_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XS08_9STRA)

HSP 1 Score: 112 bits (280), Expect = 5.750e-25
Identity = 81/221 (36.65%), Postives = 121/221 (54.75%), Query Frame = 0
Query:    1 MERSVSQLLSVRREHNCTKLDVDELKHLWDITVAFIQSVERLSGCNGYKLRSTLLSQAKAFVEARHEANKQTLVKRLDAEKWAQADVTPERQAVLDRLSSGQV-----FRPSAPAATANGNDGKEGSGVGGGGSSSYGNGGLRLPGDPPAQPNFVGGARSGGRKGGRAERRREAGVGGASFKAVGSALLVAEMSANFLQFADHFPTIGTDILTRLGELLRV 216
            +ERSVS+LL +R+E + + +  +E++HLWD  ++F  S+ER SG   Y LRSTLL+QAKAFVE +HE+N   L   LD+E+W Q DV+ ERQA L RL SG+      F    P+++   N       V    +S+  NG  +  G                      ++  +A V G  +K V S LL+ EM  + +  A HF T+ T+++ ++ ELLR+
Sbjct:  602 IERSVSELLRMRKEAH-SLVTFEEMRHLWDTCLSFTLSLERASGGKAYGLRSTLLAQAKAFVERKHESNMANLAAALDSERWTQCDVSTERQASLIRLCSGRAVLSYTFGGDTPSSSTTTN-------VNNATTSTTVNGTPKKDG----------------------KKLADAEVEGIRYKVVWSCLLLVEMVMSNVACAAHFQTLATNVVGKVSELLRL 792          
BLAST of mRNA_E-fasciculatus_F_contig13181.2401.1 vs. uniprot
Match: A0A7S4RD23_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RD23_9STRA)

HSP 1 Score: 112 bits (279), Expect = 7.620e-25
Identity = 76/214 (35.51%), Postives = 111/214 (51.87%), Query Frame = 0
Query:    3 RSVSQLLSVRREHNCTKLDVDELKHLWDITVAFIQSVERLSGCNGYKLRSTLLSQAKAFVEARHEANKQTLVKRLDAEKWAQADVTPERQAVLDRLSSGQVFRPSAPAATANGNDGKEGSGVGGGGSSSYGNGGLRLPGDPPAQPNFVGGARSGGRKGGRAERRREAGVGGASFKAVGSALLVAEMSANFLQFADHFPTIGTDILTRLGELLRV 216
            +S+S+LL +R++ + + +  DE+K LWD ++AF   +E+ SG   Y LR TLL+QAKAFVE +HEAN  +LV  LD E+W Q DVT ERQA L RL SG+    +       GN                        G+ P          S      +  +  +A V G  +K V S LL+ EM  + +  A HF T+ T+++ ++ ELLR+
Sbjct:  425 KSISELLRLRKDSH-SLITFDEMKLLWDTSLAFTLQLEKYSGRKAYNLRGTLLAQAKAFVERKHEANMASLVAALDGERWTQCDVTAERQAALTRLCSGRAVLSTNKITNRRGNS----------------------TGNDPTNITTXXXXSS------KKNKMSDAEVEGKRYKVVWSCLLLVEMVMSNVACAAHFQTLATNVVGKVVELLRL 609          
BLAST of mRNA_E-fasciculatus_F_contig13181.2401.1 vs. uniprot
Match: A0A835YJU9_9STRA (Vacuolar protein sorting-associated protein 54 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJU9_9STRA)

HSP 1 Score: 112 bits (279), Expect = 7.700e-25
Identity = 84/220 (38.18%), Postives = 112/220 (50.91%), Query Frame = 0
Query:    1 MERSVSQLLSVRREHNCTKLDVDELKHLWDITVAFIQSVERLSGCNGYKLRSTLLSQAKAFVEARHEANKQTLVKRLDAEKWAQADVTPERQAVLDRLSSGQVFR----PSAPAATANGNDGKEGSGVGGGGSSSYGNGGLRLPGDPPAQPNFVGGARSGGRKGGRAERRREAGVGGASFKAVGSALLVAEMSANFLQFADHFPTIGTDILTRLGELLRV 216
            +ERS+SQL+ VRR+ + T L   +L+ L D  + F   VE L G +G KLR TLL+Q KA+VE  H+ANK  LV           DV+PERQA++D ++ G V      PS  AA+ NG                            PA        RS        +R+REA + GA +KAV S LL+ EM+ N L+ A +FP    D+L RL ELLR+
Sbjct:  602 VERSLSQLVGVRRDLHATSLSPQQLRALCDAALEFTSKVEALCGSSGSKLRVTLLNQTKAYVECHHDANKTKLV-----------DVSPERQAMMDHITGGHVLSHALAPSHLAASMNGAS--------------------------PAAAFAPQSTRS-------KDRKREALLEGARYKAVWSTLLLVEMAYNQLRMAAYFPAAAPDVLGRLSELLRL 777          
BLAST of mRNA_E-fasciculatus_F_contig13181.2401.1 vs. uniprot
Match: B8C131_THAPS (Vps54 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C131_THAPS)

HSP 1 Score: 100 bits (250), Expect = 6.020e-21
Identity = 56/111 (50.45%), Postives = 75/111 (67.57%), Query Frame = 0
Query:    2 ERSVSQLLSVRREHNCTKLDVDELKHLWDITVAFIQSVERLSGCNGYKLRSTLLSQAKAFVEARHEANKQTLVKRLDAEKWAQADVTPERQAVLDRLSSGQV-FRPSAPAA 111
            E+SVS+LL +RRE + + +  D ++ LWD ++ F   +ER SG   Y LRSTLL+QAK+FVE +HEAN  TLV  LD+E+W Q  V+ +RQA L RL SG+  F    PAA
Sbjct:  975 EKSVSELLRLRREAH-SLVSFDGMRQLWDTSLTFTLQLERFSGRKAYGLRSTLLAQAKSFVERKHEANMSTLVAALDSERWVQCTVSADRQAALTRLCSGRAAFTSRKPAA 1084          
BLAST of mRNA_E-fasciculatus_F_contig13181.2401.1 vs. uniprot
Match: A0A7S2RDT9_9STRA (Vacuolar protein sorting-associated protein 54 (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RDT9_9STRA)

HSP 1 Score: 100 bits (248), Expect = 9.730e-21
Identity = 53/101 (52.48%), Postives = 73/101 (72.28%), Query Frame = 0
Query:    3 RSVSQLLSVRREHNCTKLDVDELKHLWDITVAFIQSVERLSGCNGYKLRSTLLSQAKAFVEARHEANKQTLVKRLDAEKWAQADVTPERQAVLDRLSSGQV 103
            +SV++LL +R+E + + +  DE+K LWD  +AF   +E+ SG   Y LRSTLL+QAKAFVE +HE+N  +LV  LD EKW+Q+DV+ ERQA L RL SG+ 
Sbjct:  417 KSVTELLRLRKEAH-SLVSFDEMKRLWDSCLAFTLQLEKYSGQKAYGLRSTLLAQAKAFVERQHESNMASLVAALDGEKWSQSDVSYERQATLTRLCSGRA 516          
BLAST of mRNA_E-fasciculatus_F_contig13181.2401.1 vs. uniprot
Match: A0A7S2W529_9STRA (Vacuolar protein sorting-associated protein 54 n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W529_9STRA)

HSP 1 Score: 100 bits (248), Expect = 1.030e-20
Identity = 53/101 (52.48%), Postives = 73/101 (72.28%), Query Frame = 0
Query:    3 RSVSQLLSVRREHNCTKLDVDELKHLWDITVAFIQSVERLSGCNGYKLRSTLLSQAKAFVEARHEANKQTLVKRLDAEKWAQADVTPERQAVLDRLSSGQV 103
            +SV++LL +R+E + + +  DE+K LWD  +AF   +E+ SG   Y LRSTLL+QAKAFVE +HE+N  +LV  LD EKW+Q+DV+ ERQA L RL SG+ 
Sbjct:  417 KSVTELLRLRKEAH-SLVSFDEMKRLWDSCLAFTLQLEKYSGQKAYGLRSTLLAQAKAFVERQHESNMASLVAALDGEKWSQSDVSYERQATLTRLCSGRA 516          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13181.2401.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0A0_ECTSI3.900e-12294.91Vacuolar protein sorting-associated protein 54 n=1... [more]
A0A7S2S5D4_9STRA4.140e-3241.28Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2FL57_9STRA6.230e-3239.82Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1TZU2_9STRA6.310e-3039.27Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S2XS08_9STRA5.750e-2536.65Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A7S4RD23_9STRA7.620e-2535.51Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A835YJU9_9STRA7.700e-2538.18Vacuolar protein sorting-associated protein 54 (Fr... [more]
B8C131_THAPS6.020e-2150.45Vps54 domain-containing protein n=1 Tax=Thalassios... [more]
A0A7S2RDT9_9STRA9.730e-2152.48Vacuolar protein sorting-associated protein 54 (Fr... [more]
A0A7S2W529_9STRA1.030e-2052.48Vacuolar protein sorting-associated protein 54 n=1... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012501Vacuolar protein sorting-associated protein 54, C-terminalPFAMPF07928Vps54coord: 174..215
e-value: 4.5E-5
score: 23.9
NoneNo IPR availablePANTHERPTHR12965:SF0VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 54coord: 2..215
IPR039745Vacuolar protein sorting-associated protein 54PANTHERPTHR12965VACUOLAR PROTEIN SORTING 54coord: 2..215

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13181contigE-fasciculatus_F_contig13181:832..3153 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13181.2401.1mRNA_E-fasciculatus_F_contig13181.2401.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13181 814..3153 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13181.2401.1 ID=prot_E-fasciculatus_F_contig13181.2401.1|Name=mRNA_E-fasciculatus_F_contig13181.2401.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=216bp
MERSVSQLLSVRREHNCTKLDVDELKHLWDITVAFIQSVERLSGCNGYKL
RSTLLSQAKAFVEARHEANKQTLVKRLDAEKWAQADVTPERQAVLDRLSS
GQVFRPSAPAATANGNDGKEGSGVGGGGSSSYGNGGLRLPGDPPAQPNFV
GGARSGGRKGGRAERRREAGVGGASFKAVGSALLVAEMSANFLQFADHFP
TIGTDILTRLGELLRV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039745Vps54
IPR012501Vps54_C