mRNA_E-fasciculatus_F_contig1318.2400.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1318.2400.1
Unique NamemRNA_E-fasciculatus_F_contig1318.2400.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig1318.2400.1 vs. uniprot
Match: D8LD47_ECTSI (DOMON domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD47_ECTSI)

HSP 1 Score: 781 bits (2018), Expect = 1.480e-280
Identity = 371/426 (87.09%), Postives = 400/426 (93.90%), Query Frame = 1
Query:    1 DPYTDVLPTRLLAAWGDSETIGYHAANFAKAEVILYGGVENSNTDPIIELASDPDVTFFDVTAKNFTIPTIRTHYENSCINRSELPAEEFHAIGFEGLIQESTSKYVHHLTLTAYTGTHNCGQDCLDWVLANLPEDYYSDDPSSSSPSAYTDPYTFNNLTIPDFCYQQFANIFAWAPGAADVQLPDFVGFRFGNDSYTSIRVETHYNNPDGDAGEIDSSGVRVYFTEDMREMDMGVLTLGDPNIDLIGTQLPEGKSSVEFDCPAACTETYFDAESVTIYSHFLHMHENGQRMETRQYRTDSDGNEQLIDATEVEYFSFLQAGGLVTAHNGSDIIQKGDRFETICYYDTSLSSVDSANVTFGEGSEQEMCMDFLYYYPAQVIPEGGYCGGLGTCGGSFLGITALEDDTDFNRTFGIVDSCTGTLDED 1278
            D   DVLPTRLLAAWGDSETI YHAANFAKAEVILYGGVENSNTDPI+EL +DPD+ FFDVTAKNFT+PT RTHYENSCI RSELPAEEFHAIGFEG+IQ STSKYVHHLTLTA+TGTH+CGQDC+DWVLANLP+D   D+PSS S  AY+DPYTFNN+TIPDFCYQQFANIFAWAPG+ADVQLP  VGFRFGNDSYTS+RVETHYNNPDGDAGE+DSSGVRVY+TED+REMDMGV+TLGDP++DLIGT+LPEGKSSVEFDCP ACTETYF+AESVT+YSHFLHMHENGQRMETRQYR DSDGNEQL+DATEVEY+SFLQAGG VTAHNGSDIIQKGDRFET CYYDTSLSSVDS NVTFGEGSEQEMCMDFL+YYPAQ+IP+GGYCGGL  CGGSFLGIT L D+TDFNRTFGIVDSCTGTLDED
Sbjct:  155 DSADDVLPTRLLAAWGDSETIAYHAANFAKAEVILYGGVENSNTDPILELTTDPDIPFFDVTAKNFTVPTNRTHYENSCIPRSELPAEEFHAIGFEGIIQTSTSKYVHHLTLTAFTGTHDCGQDCIDWVLANLPDD---DEPSSQS--AYSDPYTFNNMTIPDFCYQQFANIFAWAPGSADVQLPGNVGFRFGNDSYTSLRVETHYNNPDGDAGEVDSSGVRVYYTEDIREMDMGVITLGDPSVDLIGTKLPEGKSSVEFDCPGACTETYFEAESVTVYSHFLHMHENGQRMETRQYRNDSDGNEQLVDATEVEYYSFLQAGGHVTAHNGSDIIQKGDRFETTCYYDTSLSSVDSTNVTFGEGSEQEMCMDFLFYYPAQIIPDGGYCGGLERCGGSFLGITELGDETDFNRTFGIVDSCTGTLDED 575          
BLAST of mRNA_E-fasciculatus_F_contig1318.2400.1 vs. uniprot
Match: D7G337_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G337_ECTSI)

HSP 1 Score: 474 bits (1220), Expect = 1.460e-159
Identity = 240/460 (52.17%), Postives = 311/460 (67.61%), Query Frame = 1
Query:    1 DPYTDVLPTRLLAAWGDSETIGYHAANFAKAEVILYGGVENSNT-DPIIELASDPDVTFFDVTAKNFTIPTIRTHYENSCINRSELP-AEEFHAIGFEGLIQESTSKYVHHLTLTAYTGTHNCGQDCLDWVLANLPED----------------------------YYSDDPSSSSPSAYTDPYTFNNLTIPDFC--YQQFANIFAWAPGAADVQLPDFVGFRFGNDS--YTSIRVETHYNNPDGDAGEIDSSGVRVYFTEDMREMDMGVLTLGDPNIDLIGTQLPEGKSSVEFDCPAACTETYFDAESVTIYSHFLHMHENGQRMETRQYRTDSDGNEQLIDATEVEYFSFLQAGGLVTAHNGSDIIQKGDRFETICYYDTSLSSVDSANVTFGEGSEQEMCMDFLYYYPAQVIPEGGYCGGLGTCGGSFLGITALEDDTDFNRTFGIVDSCTGTLDED 1278
            D      PTR+L AWGDS+T+GYH  NFAK +V+++GG EN +  DP++++ +  DV FFD   KNF+IPT+RT YE++CI  SELP  +E+H I FEGL+Q  T++YVHHL LT + G  +CG  C +W+      D                            Y SDD SS S   +T+ +   N+T+P FC  Y + A+IF WAPG ++++LPD VGF FGN+S  + S+ ++THYNNPDG +G+ DSSGVRVY+TE++R + MG++ LGDP + L    LPEGKSS  F CP +C+ET F+ E VT++ H LHMHENGQRM TRQYR DSDGNE LI   EVEY+S LQAGG +  +N +  I+KGDRF T C YDTSLSSV SANVTFG GSEQEMC+DF++YYP Q +P+ G CG +G C G  LG + LE D+DFNRTFGIVD+CT +   D
Sbjct:  123 DSLDGTQPTRVLVAWGDSDTVGYHDENFAKGQVVMFGGSENDDAADPVVDVKTSEDVQFFDAAPKNFSIPTVRTWYEDTCITASELPDLDEYHVIAFEGLLQADTAEYVHHLVLTGFYGASDCGHACNEWLDEIFGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXSYPSDDSSSVS---FTEYFENLNITVPTFCSNYGEQADIFLWAPGTSNLELPDDVGFLFGNESGGFNSLNIQTHYNNPDGVSGKNDSSGVRVYYTEELRPIQMGLMKLGDPFVALYDQPLPEGKSSFSFGCPGSCSETNFEEEEVTVFIHMLHMHENGQRMVTRQYRNDSDGNEVLIHTAEVEYYSVLQAGGHLVTNNETITIRKGDRFTTECMYDTSLSSVSSANVTFGLGSEQEMCIDFVFYYPDQRMPDTGACG-VGACDGGVLGYSQLEADSDFNRTFGIVDTCTSSFTGD 578          
BLAST of mRNA_E-fasciculatus_F_contig1318.2400.1 vs. uniprot
Match: D7G216_ECTSI (DOMON domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G216_ECTSI)

HSP 1 Score: 474 bits (1219), Expect = 3.530e-159
Identity = 240/451 (53.22%), Postives = 310/451 (68.74%), Query Frame = 1
Query:    1 DPYTDVLPTRLLAAWGDSETIGYHAANFAKAEVILYGGVENSNT-DPIIELASDPDVTFFDVTAKNFTIPTIRTHYENSCINRSELP-AEEFHAIGFEGLIQESTSKYVHHLTLTAYTGTHNCGQDCLDWVLANLPEDYYSDDPS----------------SSSPS------AYTDPYTFNNLTIPDFC--YQQFANIFAWAPGAADVQLPDFVGFRFGNDS--YTSIRVETHYNNPDGDAGEIDSSGVRVYFTEDMREMDMGVLTLGDPNIDLIGTQLPEGKSSVEFDCPAACTETYFDAESVTIYSHFLHMHENGQRMETRQYRTDSDGNEQLIDATEVEYFSFLQAGGLVTAHNGSDIIQKGDRFETICYYDTSLSSVDSANVTFGEGSEQEMCMDFLYYYPAQVIPEGGYCGGLGTCGGSFLGITALEDDTDFNRTFGIVDSCTGTL 1269
            D +   +PTR+L AWGDS+T+GYH  NFAK +V+++GG EN +  DP+I++ +  DV FFD   KNF+IPT+RT YEN+CI  SELP  +E+HAI FEGL+Q  T++YVHHL LT + G  +CG+ C +W+      +  SD  S                SS PS      ++T+ +   N+T+P FC  Y + A+IF WAPG ++++LP  VGF  GN+S  + S+ ++THYNNPDG +G+ DSSGVRVY+TE++R + MGVL LGDP I L    LP+GKSS  F CP  C+ET F+ E VTI++H LHMHENGQRM T QYR D +GNE+LI  TEV Y+S LQAG  V   NGS  I+KGD F T C YDTSLSSV SANVTFG GSEQEMC++F++YYP Q +P+GG CG +  C G  LG   LE D+DFNRTFGIVD+CT +L
Sbjct:  144 DSFDGAIPTRVLTAWGDSDTVGYHGENFAKGQVVMFGGSENDDAADPVIDVKTSEDVQFFDAAPKNFSIPTVRTWYENTCITASELPDLDEYHAIAFEGLLQADTAEYVHHLILTGFYGASDCGKACSEWLDEMFASEDGSDSSSTVEGGXXXXXXXXXSGSSYPSDDSSSVSFTEYFENLNITVPSFCSNYGEQADIFVWAPGTSNLELPGDVGFLLGNESGGFNSLNIQTHYNNPDGVSGKNDSSGVRVYYTEELRPIQMGVLKLGDPFIALSDQPLPDGKSSFSFGCPGTCSETNFEEEEVTIFNHVLHMHENGQRMVTHQYRDDGEGNEELIHTTEVWYYSSLQAGAHVVTVNGSATIKKGDSFTTQCMYDTSLSSVGSANVTFGLGSEQEMCVNFIFYYPDQRLPDGGACG-VFACDGGVLGYEELEADSDFNRTFGIVDTCTSSL 593          
BLAST of mRNA_E-fasciculatus_F_contig1318.2400.1 vs. uniprot
Match: D7FP38_ECTSI (DOMON domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP38_ECTSI)

HSP 1 Score: 452 bits (1163), Expect = 3.390e-151
Identity = 231/420 (55.00%), Postives = 294/420 (70.00%), Query Frame = 1
Query:   25 TRLLAAWGDSETIGYHAANFAKAEVILYGGVENSNT-DPIIELASDPDVTFFDVTAKNFTIPTIRTHYENSCINRSELPA-EEFHAIGFEGLIQESTSKYVHHLTLTAYTGTHNCGQDCLDWVLANLPEDYYSDDPSSSSPSAYTDPYTFNNLTIPDFC--YQQFANIFAWAPGAADVQLPDFVGFRFGNDS--YTSIRVETHYNNPDGDAGEIDSSGVRVYFTEDMREMDMGVLTLGDPNIDLIGTQLPEGKSSVEFDCPAACTETYFDAESVTIYSHFLHMHENGQRMETRQYRTDSDGNEQLIDATEVEYFSFLQAGGLVTAHNGSDIIQKGDRFETICYYDTSLSSVDSANVTFGEGSEQEMCMDFLYYYPAQVIPEGGYCGGLGTCGGSFLGITALEDDTDFNRTFGIVDSCTGT 1266
            TRLLAAWGDSE +GYH  N AK EV+++GG EN++  +P++       V FFD T+KNF+IPT+RT YEN+CI  SELP  +E+HAIGFEG++Q+ T+++VHHL LT + G  +CG  C +W+     ++ + D  SS S S  T      N+T+P FC   +  A+IF WAPG   + LPD VGF FGN+S    S+RV+ HYNN DG +G+ DSSGVRVY+TE++R M+MG++ LGDP   L    LP+GKS   F CP  CTETYF+ E VT++SH LHMHENGQR+ TRQYR D DGNE LI   EVEY+SFLQAG  V   N S  I+KGD F T CYYDTS SSV S NVT+G GSE EMC+DF++YYP Q +P+ G CG    C G+ LG + LED +DFNRTFG+VD+CT +
Sbjct:  161 TRLLAAWGDSEFMGYHDGNLAKGEVVMFGGSENADAAEPLV-------VNFFDATSKNFSIPTVRTWYENTCIPASELPKLDEYHAIGFEGVLQDDTAEFVHHLVLTGFYGPPDCGNACFEWM-----DEMFGDGGSSYSSSDMT------NITLPWFCNDLEDAADIFIWAPGMQSLDLPDDVGFLFGNESGGLNSLRVQVHYNNADGVSGKNDSSGVRVYYTEELRPMNMGLVKLGDPQGALHPQPLPDGKSVYSFGCPGTCTETYFEEEEVTVFSHLLHMHENGQRISTRQYRNDGDGNEVLIHTAEVEYYSFLQAGVHVVTVNDSTTIKKGDVFTTECYYDTSYSSVGSPNVTWGLGSENEMCIDFVFYYPDQKLPDRGACGS-NLCNGTLLGYSELEDVSDFNRTFGVVDTCTSS 561          
BLAST of mRNA_E-fasciculatus_F_contig1318.2400.1 vs. uniprot
Match: D7G217_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G217_ECTSI)

HSP 1 Score: 437 bits (1125), Expect = 2.100e-147
Identity = 224/425 (52.71%), Postives = 285/425 (67.06%), Query Frame = 1
Query:  103 LYGGVENSNT-DPIIELASDPDVTFFDVTAKNFTIPTIRTHYENSCINRSELP-AEEFHAIGFEGLIQESTSKYVHHLTLTAYTGTHNCGQDCLDWVLANLPED------------------------------YYSDDPSSSSPSAYTDPYTFNNLTIPDFC--YQQFANIFAWAPGAADVQLPDFVGFRFGNDS--YTSIRVETHYNNPDGDAGEIDSSGVRVYFTEDMREMDMGVLTLGDPNIDLIGTQLPEGKSSVEFDCPAACTETYFDAESVTIYSHFLHMHENGQRMETRQYRTDSDGNEQLIDATEVEYFSFLQAGGLVTAHNGSDIIQKGDRFETICYYDTSLSSVDSANVTFGEGSEQEMCMDFLYYYPAQVIPEGGYCGGLGTCGGSFLGITALEDDTDFNRTFGIVDSCTGTL 1269
            ++GG EN +  DP++++ +  DV FFD   KNF+IPT+RT YE++CI  SELP  +E+H I FEGL+Q  T++YVHHL LT + G  +CG  C +W+      D                              Y SDD SS S   +T+ +   N+T+P FC  Y  FA+IF WAPG ++++LPD VGF FGN+S  + S+ ++THYNNPDG +G+ DSSGVRVY+TE++R + MGVL LGDP + L    LPEGKSS  F CP  C+ET F+ E VTI++H LHMHENGQRM T QYR D +GNE+LI  TEV Y+SFLQAG  V   NGS  I+KGD F T C YDTSLSSVD ANVTFGEGSEQEMC+D+++YYP Q +P+GG CG +  C G  LG   LE D+DFNRTFGIVD+CT +L
Sbjct:    1 MFGGSENDDAADPVVDVKTSEDVQFFDAAPKNFSIPTVRTWYEDTCITASELPDLDEYHVIAFEGLLQADTAEYVHHLVLTGFYGASDCGNACNEWLDEMFGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYPSDDSSSVS---FTEYFENLNITVPSFCSNYGDFADIFLWAPGTSNLELPDDVGFLFGNESGGFNSLNIQTHYNNPDGVSGKNDSSGVRVYYTEELRPIQMGVLKLGDPFVALYDQPLPEGKSSFSFGCPGTCSETNFEEEEVTIFNHVLHMHENGQRMVTHQYRDDGEGNEELIHTTEVGYYSFLQAGAHVVTVNGSATIKKGDSFTTQCMYDTSLSSVDPANVTFGEGSEQEMCIDYIFYYPDQRLPDGGACG-VFACDGGILGYAELEADSDFNRTFGIVDTCTSSL 421          
BLAST of mRNA_E-fasciculatus_F_contig1318.2400.1 vs. uniprot
Match: A0A6H5K5A3_9PHAE (Cu2_monoox_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A3_9PHAE)

HSP 1 Score: 395 bits (1015), Expect = 1.400e-132
Identity = 203/312 (65.06%), Postives = 221/312 (70.83%), Query Frame = 1
Query:  562 VGFRFGNDSYTSIRVETHYNNPDGDAGEIDSSGVRVYFTEDMREMDMGVLTLGDPNIDLIGTQLPEGKSSVEFDCPAACTETYFDAESVTIYSHFLHMHENGQRMETRQYRTDSDGNEQLIDATEVEYFSFLQAGGLVTAHNGSDIIQ------------------------KGDRFETICYYDTSLSSVDSANVTFGEGSEQEM-------------------------------------------------CMDFLYYYPAQVIPEGGYCGGLGTCGGSFLGITALEDDTDFNRTFGIVDSCTGTLDED 1278
            VGFRFGNDSYTS+RVETH NNPDGDAGE+DSS VRVY+TE +REMDMGV+TLGDPN+DL GT+LPEGKSSVEFDCP  CTETY +AESVT+YSHFLHMH NGQRMETRQYR+DSDGNEQL+DATEVEY+SFLQAGG VTAHNGSDIIQ                        KGD FET CYYDTSLSSVDS NVTFGEGSE+ M                                                 CMDFL+YYPAQ+I +GGYCGGL  CGGSFLGIT LED+TD NRTFGIVDSCTGT+DED
Sbjct:   19 VGFRFGNDSYTSLRVETHNNNPDGDAGEVDSSSVRVYYTEGIREMDMGVITLGDPNVDLTGTKLPEGKSSVEFDCPGVCTETYLEAESVTVYSHFLHMHGNGQRMETRQYRSDSDGNEQLVDATEVEYYSFLQAGGHVTAHNGSDIIQYIHYLLPPNAFVLPCLAFVSVFLQKGDSFETTCYYDTSLSSVDSTNVTFGEGSEEGMGKIDDETALVRLKAYHTNEQNSETVYVRAGSFSVVTVVDADKNDTHTHVCMDFLFYYPAQIIRDGGYCGGLERCGGSFLGITDLEDETDLNRTFGIVDSCTGTIDED 330          
BLAST of mRNA_E-fasciculatus_F_contig1318.2400.1 vs. uniprot
Match: D7FP36_ECTSI (Cu2_monoox_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP36_ECTSI)

HSP 1 Score: 244 bits (622), Expect = 5.520e-75
Identity = 117/189 (61.90%), Postives = 143/189 (75.66%), Query Frame = 1
Query:  700 MGVLTLGDPNIDLIGTQLPEGKSSVEFDCPAACTETYFDAESVTIYSHFLHMHENGQRMETRQYRTDSDGNEQLIDATEVEYFSFLQAGGLVTAHNGSDIIQKGDRFETICYYDTSLSSVDSANVTFGEGSEQEMCMDFLYYYPAQVIPEGGYCGGLGTCGGSFLGITALEDDTDFNRTFGIVDSCTGT 1266
            MGV+ LGDP + L    LP+GKS+  F CP+ CTET+F+ E VT++SH LHMHENGQRM TRQYRTDSDGNE L+   +VEY+SFLQAG  V + N S  I+KGD F T C+YDTS SSVDS+NVTFG GSE EMC+D++ YYP Q +P GG CG L  C GS L  + LE+D+DFNRTFG+VD+CT +
Sbjct:    1 MGVIKLGDPYVALESQTLPDGKSTFSFGCPSTCTETHFEEEEVTVFSHLLHMHENGQRMLTRQYRTDSDGNEVLLHTADVEYYSFLQAGAHVVSVNDSTTIKKGDVFTTECFYDTSYSSVDSSNVTFGLGSENEMCIDYVLYYPDQRLPNGGACGLL-ACDGSILSYSELEEDSDFNRTFGVVDTCTSS 188          
BLAST of mRNA_E-fasciculatus_F_contig1318.2400.1 vs. uniprot
Match: D7FP37_ECTSI (DOMON domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP37_ECTSI)

HSP 1 Score: 198 bits (503), Expect = 2.570e-55
Identity = 105/219 (47.95%), Postives = 144/219 (65.75%), Query Frame = 1
Query:    1 DPYTDVLPTRLLAAWGDSETIGYHAANFAKAEVILYGGVENSNT-DPIIELASDPDVTFFDVTAKNFTIPTIRTHYENSCINRSELP-AEEFHAIGFEGLIQESTSKYVHHLTLTAYTGTHNCGQDCLDWVLANLPED----YYSDDPSSSSP----------SAYTDPY--TF---NNLTIPDFCYQ--QFANIFAWAPGAADVQLPDFVGFRFGNDS 588
            D     L TRLLAAWGDSE++GYH  NFAK EV+++GG E+++  +P++E+ +  D ++FDV  KNFTIPT RT YE +CI  SELP  +E+HAIGFEG++QE T+++VHHL LT + G  +CG  C +W+      D    Y S+D SSS+P          S+Y+  Y  T+   NN+T+P FCY     A+IF W PG  +++LPD VGF FGN+S
Sbjct:  156 DSLDGALATRLLAAWGDSESLGYHDVNFAKGEVVMFGGSESADAAEPLVEVKASEDFSYFDVAPKNFTIPTERTWYEETCIKASELPNLDEYHAIGFEGILQEDTAEFVHHLVLTGWYGPPDCGDACFEWLDEIFGGDGSDSYDSEDLSSSNPLDLSGTSGSSSSYSSSYITTYFERNNITLPWFCYNLDDTADIFTWTPGPRNLELPDDVGFLFGNES 374          
BLAST of mRNA_E-fasciculatus_F_contig1318.2400.1 vs. uniprot
Match: A0A1Z5JSD8_FISSO (DOMON domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JSD8_FISSO)

HSP 1 Score: 189 bits (479), Expect = 4.710e-50
Identity = 129/381 (33.86%), Postives = 182/381 (47.77%), Query Frame = 1
Query:   19 LPTRLL-AAWGDSETIGYHAANFAKAEVILYGGVENSNTDPIIELASDPDVTFFDVTAKNFTIPTIRTHYENSCINRSEL-----PAEEFHAIGFEGLIQESTSKYVHHLTLTAYTGTHNCGQDCLDWVLANLPEDYYSDDPSSSSPSAYTDPYTFNNLTIPDFCYQQFANIFAWAPGAADVQLPDFVGFRFGNDSYTSIRVETHYNNPDGDAGEIDSSGVRVYFTEDMREMDMGVLTLGDPNIDLIGTQLPEGKSSVEFDCPAACTETYFDAESVTIYSHFLHMHENGQRMETRQYRTDSDGNEQLIDATEVEYFSFLQAGGLVTAHNGSDIIQKGDRFETICYYDTSLSSVDSANVTFGEGSEQEMCMDFLYYYPAQVI 1143
            LP  L+ AAWGDS T  YH    A+  +  Y   E    +    +     + FF++   N  IP + T Y + C +  +L     PAE+F  +GFE ++     +++HH TL       N G+ C                      SAY D     +L +          I+ WA G     LP  VG   G  +Y S R+E HY+NP    G +DSSGVR Y++E MR +++G+L LGDP I L G  + +G +   FDCP+ CTET    E VT+   +LHMH  G  M+    R   DG  ++I    V+YF F Q G  +       + +KGD + TIC YD         N TFG  S++EMC+ F+ YYP Q++
Sbjct:  170 LPASLIVAAWGDSATHAYHGEQRARGTIRFYNN-EIDGDEAFANIMKQESIGFFEMKGDNHPIPNVDTEYFDYCYSWDDLLAQGVPAEKFSVVGFEPILD--AIEHLHHFTLFGSYEPMN-GEPC----------------------SAYAD-----HLDL----------IYGWAKGEDPAALPLDVGLYIGPGTYQSFRLEIHYDNPQLKEGVLDSSGVRFYYSEKMRPVELGLLRLGDPIISLEGQPVGDGLTQHIFDCPSTCTETMLKQE-VTVLREYLHMHYAGATMQNELIR---DG--EVIHTGTVDYFRFDQQGNQLVKQMPYTV-KKGDAYRTICNYDDK-----GRNATFGFSSQEEMCIVFIMYYPKQIL 497          
BLAST of mRNA_E-fasciculatus_F_contig1318.2400.1 vs. uniprot
Match: A0A7S0ASV8_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0ASV8_9STRA)

HSP 1 Score: 183 bits (465), Expect = 6.370e-48
Identity = 136/431 (31.55%), Postives = 204/431 (47.33%), Query Frame = 1
Query:   16 VLPTRLLAAWGDSETIGYHAANFAKAEVILYGGVENSNTDPII---ELASDPDVTFFDVTAKNFTIPTIRTHYENSCINRSEL-----PAE-EFHAIGFEGLIQESTSKYVHHLTL--TAYTGTHNCGQDCLDWVLANLPEDYYSDDPSSSSPSAYTDPYTFNNLTIPDFCYQQFANIFAWAPGAADVQLPDFVGFRFG--NDSYTSIRVETHYNNPDGDAGEIDSSGVRVYFTEDMREMDMGVLTLGDPNIDLIGTQLPEGKSSVEFDCPAACTETYFDAESVTIYSHFLHMHENGQRMETRQYRTDSDGNEQLIDATEVEYFSFLQAGGLVTAHNGSDIIQKGDRFETICYYDTSLSSVDSANVTFGEGSEQEMCMDFLYYYPAQVIPEGGYCGGLGTCGGSFL-----GITALEDDTDFNRTFGIVDS 1254
            + P R++AAWGD+ T+ YH  N A++ +  Y   + S T+  +   E+A + +  + D+   N  I    T Y + C +  +L     PA+   H IGFE LI   ++K++HHL +  + + G    G  C    +A             S   A T                     + +APG    ++PD  G   G   DSY    +  HY+N   D G  DSSGVR+Y+T   R+ D G+L LGDP + L G  + +G    +F+CP++CT   F  E VT+Y   LHMHE G+ M     R   DG  +++    V+YF F QAG L     G+  I+ GD   T C ++T+ S      + +G GS+ EMC+ +++YYP Q IP       LG CG ++           E  ++  R FG+V S
Sbjct:  168 IPPHRVIAAWGDTPTVSYHGDNRARSALRFYPAHDKSGTEEDVFADEMAQEAE-GYIDLIMPNHPISLDETEYVDLCFSHEDLINLGMPADVPLHIIGFEPLID--SAKHLHHLVMFGSGFDGDLTNGS-CDQTAVA------------MSGGLALT---------------------WGYAPGGVPWEMPDEAGVPLGPGEDSYKMFYLNYHYDNRWQDTGITDSSGVRIYYTSRKRQYDAGILQLGDPIVQLAGEPIGQGLVRHDFNCPSSCTSFNF-REEVTVYKEVLHMHEKGEFMFNEIIR---DG--EVMRRASVDYFDFEQAG-LHEVQQGTFTIKPGDSIRTSCSFNTTSSK---KGIEYGYGSQDEMCVSYMHYYPKQKIP-------LGVCGANWFFPACSATLTTEPISEVERVFGVVPS 544          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1318.2400.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LD47_ECTSI1.480e-28087.09DOMON domain-containing protein n=1 Tax=Ectocarpus... [more]
D7G337_ECTSI1.460e-15952.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G216_ECTSI3.530e-15953.22DOMON domain-containing protein n=2 Tax=Ectocarpus... [more]
D7FP38_ECTSI3.390e-15155.00DOMON domain-containing protein n=2 Tax=Ectocarpus... [more]
D7G217_ECTSI2.100e-14752.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K5A3_9PHAE1.400e-13265.06Cu2_monoox_C domain-containing protein n=1 Tax=Ect... [more]
D7FP36_ECTSI5.520e-7561.90Cu2_monoox_C domain-containing protein n=1 Tax=Ect... [more]
D7FP37_ECTSI2.570e-5547.95DOMON domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A1Z5JSD8_FISSO4.710e-5033.86DOMON domain-containing protein n=2 Tax=Fistulifer... [more]
A0A7S0ASV8_9STRA6.370e-4831.55Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1318contigE-fasciculatus_F_contig1318:13002..18491 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score785.8
Seed ortholog evalue1.1e-224
Seed eggNOG ortholog2880.D8LD47
EggNOG free text desc.octopamine biosynthetic process
EggNOG OGsKOG3568@1,KOG3568@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPHM/PNGase F domain
Ec32 orthologEc-11_000420.1
Exons8
Model size1410
Cds size1410
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1318.2400.1prot_E-fasciculatus_F_contig1318.2400.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1318 13002..18491 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927821.3352706-CDS-E-fasciculatus_F_contig1318:13001..131211622927821.3352706-CDS-E-fasciculatus_F_contig1318:13001..13121Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1318 13002..13121 -
1695995709.0887175-CDS-E-fasciculatus_F_contig1318:13001..131211695995709.0887175-CDS-E-fasciculatus_F_contig1318:13001..13121Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1318 13002..13121 -
1622927821.3521307-CDS-E-fasciculatus_F_contig1318:13427..136141622927821.3521307-CDS-E-fasciculatus_F_contig1318:13427..13614Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1318 13428..13614 -
1695995709.1048517-CDS-E-fasciculatus_F_contig1318:13427..136141695995709.1048517-CDS-E-fasciculatus_F_contig1318:13427..13614Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1318 13428..13614 -
1622927821.3673744-CDS-E-fasciculatus_F_contig1318:14484..145821622927821.3673744-CDS-E-fasciculatus_F_contig1318:14484..14582Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1318 14485..14582 -
1695995709.118314-CDS-E-fasciculatus_F_contig1318:14484..145821695995709.118314-CDS-E-fasciculatus_F_contig1318:14484..14582Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1318 14485..14582 -
1622927821.3844638-CDS-E-fasciculatus_F_contig1318:15081..152701622927821.3844638-CDS-E-fasciculatus_F_contig1318:15081..15270Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1318 15082..15270 -
1695995709.1275702-CDS-E-fasciculatus_F_contig1318:15081..152701695995709.1275702-CDS-E-fasciculatus_F_contig1318:15081..15270Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1318 15082..15270 -
1622927821.3990157-CDS-E-fasciculatus_F_contig1318:15790..160041622927821.3990157-CDS-E-fasciculatus_F_contig1318:15790..16004Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1318 15791..16004 -
1695995709.1376278-CDS-E-fasciculatus_F_contig1318:15790..160041695995709.1376278-CDS-E-fasciculatus_F_contig1318:15790..16004Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1318 15791..16004 -
1622927821.4131837-CDS-E-fasciculatus_F_contig1318:16248..165831622927821.4131837-CDS-E-fasciculatus_F_contig1318:16248..16583Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1318 16249..16583 -
1695995709.1485674-CDS-E-fasciculatus_F_contig1318:16248..165831695995709.1485674-CDS-E-fasciculatus_F_contig1318:16248..16583Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1318 16249..16583 -
1622927821.4250247-CDS-E-fasciculatus_F_contig1318:17714..177921622927821.4250247-CDS-E-fasciculatus_F_contig1318:17714..17792Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1318 17715..17792 -
1695995709.1598775-CDS-E-fasciculatus_F_contig1318:17714..177921695995709.1598775-CDS-E-fasciculatus_F_contig1318:17714..17792Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1318 17715..17792 -
1622927821.4394236-CDS-E-fasciculatus_F_contig1318:18302..184911622927821.4394236-CDS-E-fasciculatus_F_contig1318:18302..18491Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1318 18303..18491 -
1695995709.1686647-CDS-E-fasciculatus_F_contig1318:18302..184911695995709.1686647-CDS-E-fasciculatus_F_contig1318:18302..18491Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1318 18303..18491 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1318.2400.1

>prot_E-fasciculatus_F_contig1318.2400.1 ID=prot_E-fasciculatus_F_contig1318.2400.1|Name=mRNA_E-fasciculatus_F_contig1318.2400.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=470bp
DPYTDVLPTRLLAAWGDSETIGYHAANFAKAEVILYGGVENSNTDPIIEL
ASDPDVTFFDVTAKNFTIPTIRTHYENSCINRSELPAEEFHAIGFEGLIQ
ESTSKYVHHLTLTAYTGTHNCGQDCLDWVLANLPEDYYSDDPSSSSPSAY
TDPYTFNNLTIPDFCYQQFANIFAWAPGAADVQLPDFVGFRFGNDSYTSI
RVETHYNNPDGDAGEIDSSGVRVYFTEDMREMDMGVLTLGDPNIDLIGTQ
LPEGKSSVEFDCPAACTETYFDAESVTIYSHFLHMHENGQRMETRQYRTD
SDGNEQLIDATEVEYFSFLQAGGLVTAHNGSDIIQKGDRFETICYYDTSL
SSVDSANVTFGEGSEQEMCMDFLYYYPAQVIPEGGYCGGLGTCGGSFLGI
TALEDDTDFNRTFGIVDSCTGTLDEDEDEQNDGTLSTDSSSVAALGLGLS
AFTMAVALSLSPCVVDWLV*
back to top

mRNA from alignment at E-fasciculatus_F_contig1318:13002..18491-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1318.2400.1 ID=mRNA_E-fasciculatus_F_contig1318.2400.1|Name=mRNA_E-fasciculatus_F_contig1318.2400.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=5490bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1318:13002..18491- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GACCCGTACACAGATGTCTTGCCGACGCGACTCCTTGCCGCCTGGGGCGA CTCCGAGACCATCGGATACCACGCTGCCAATTTCGCGAAGGCAGAGGTCA TTCTCTACGGCGGGGTCGAGAACTCCAACACCGATCCGATTATCGAGCTC GCCTCTGACCCGGACGTCACTTTCTTCGATGTCACCGCGGTGAGGAACGG AAGGCACAGAGGAGTTTTCTTGTTACGTTTGGTCGGTTGTCTTTTTTCCT CGGAGTGCACACCGTGCACCCGGAGGAGTAAGTGCTACAACCGTGATAGA TTACCGCACATCGGTGTTCTCCGTTCTCACTTGTAGCCACCGTCCGGTAC CTTTACAGGATGGTGAAAAATCTGCTAGTGTTTTTTTGTCGTCCCTTGAG TGCTTCTACTCCGAAATGTACTGTAGGTCGCGGTTTCTGTCCATCTTTGT AGTCGATGAACACCTCACCGATCTCCCATCTCTTACTATGTAGTCCGAAC ACTTTCTGCGTTCACCTTCTTTTCTGGCCGTCTCGGACCGAGCTTCCGTC TATAAGTAGGCCCGCACCCCCAGAAAAGCGAGCGTTCTCCATGCCTCTCC AAGACGAGCTACAGCCAGTAGCCTGGGACTGATCCGCACCCACCCTTCTT GTTCTCATGACCCTGCTGTCGTGAAATCTTCGTTTGGTTTTCAACGCAGA AAAACTTCACGATCCCGACAATCCGCACCCACTACGAGAACTCGTGCATT AATCGCTCGGAACTGCCTGCCGAAGAGGTGCGTGCTACAGTACTATGGTG CGATTCAATCGCATGATGCGATCCGGCTACCGTTCTGAGATTGTGACGTA CTCTTCCGGCTGGTATATGGTATATGTACGACCTCCCACACGTGTCCATC TCGAGACCTCAGGCACGGGAGTGCGTTTTACCACAACTACGGACTGTAGT CATCGCTTTAGAACCGCCCTGTCCCGTTTCGTGCATACTCCCTCTGTCCC ATAGGTGAGCGTACCTAACTGCTCTAGGTATGAGTGTCGTGTCAATGATG ATGCTATGTCCGGGAATGTTGGACAAACCATACGCAGACGAAGCTAGTGA AAAAAAGATAACGAAGCAGCACTGTTTCTTACTTGGAATGACCCAAGTTT TGTGTCTTTTCATCCACTATTTAGAGCCAAATATTGGCCCATTTTGAAAG TTTACACGTCGCGACCAGTAGCAATTAGACGACGAGCTTTTGTTGCATGG AGCGTGGGTTGGTTGTCCTCGAAGAGGTATCCAATAAATACGGCAATTTT CAACTTTTCGACTCTATCTGTTTTCACCAAGTTTCACGAAGTTGACGTGG TTCCGAGAAAAACGGAACTATGGCCATTTGGGGGTCGACTGATTGTTTTG CGGCCGTTCGGCCGCATGGTTGAAGGGCCAGCTGAAGAAACGTGTTTTAC CTAGAAAAAGTCCCAAGGAATTCAACAAAAACAACGACATACAGATCGGA CACCGTTAACGGCCCGTACAAATTTAGGTACCCTAACTTAGGAACAGAGC AAGTACAGCATGTTCTATGTGGCGATCTACCTTGGGTCTTGTGTGACCCC GGCTGGGTCTTGGAGTCGTTCAGCTCAGTCGAAGTGATACTCAGTCAAAA AATATTACAACACTAAACGATAGAGATAGAGCCATCGGCTTCACACGCAT GCGTGCATGTAAGCATTGATTTGCAGCCGTCGTACATATATACGATGGGG GCATCGGCTGCCTAAATACCTGTATGCGTAAACTGGCTACAAGCACAGCT CTGCCAGAAATATATCTGACGTGTTGACAAAACTCTATCCACCCCCTCTC TCCCTCCCCCCCTCCCTCGCTCCCCGTCAACCTCTTCGTCCAAAACGAAC GGCCCCAGTTCCACGCGATCGGGTTCGAGGGTCTCATCCAGGAGTCCACC TCCAAGTATGTGCACCACTTGACGCTCACGGCCTACACCGGTACGCACAA CTGCGGGCAGGACTGCCTCGACTGGGTTCTGGCAAACCTTCCCGAAGACT ACTATTCCGACGACCCTTCCTCCTCCTCTCCTTCGGCGTACACCGACCCG TACACCTTCAACAACCTGACGATCCCGGACTTCTGCTACCAACAGTTTGC GAACATTTTCGCGTGGGCGCCAGGGGCGGCGGACGTCCAGCTGCCAGACT TCGTGGGCTTCCGCTTCGGCAACGACTCTTACACGTCCATCAGGTGATCT ACGTTTTGCGTTTTGTACTGTTTTGTCTGTCTCGGCAAAGCCCGAAAGGA AGCGCTTCTTAACGTTCTGCGTACAGTTTTGTCATGCGAGTGTTTTCGAT TCGTTGGTGGGGTGGGAGTAGCTCCTTCGTTCGACCTATATATGTGGCCA CGGCTGGATCCTGAGAGCAGTCAAAGCACGTTCTTCCTTCGATCAATCGA TCAAATCAAATCAAATCAAATCAAATCAAATCAATAGGGTCGAAACACAC TACAACAATCCGGATGGGGACGCCGGCGAGATAGACAGCTCGGGCGTGCG CGTGTACTTCACGGAAGACATGCGCGAAATGGATATGGGTGTACTCACCC TGGGAGACCCGAACATCGACCTCATCGGGACCCAGTTGCCGGAGGGGAAA TCGTCCGTGGAGTTCGACTGCCCCGCCGCTTGCACCGAGACTTACTTCGA CGTGAGTGGGATTTGATTGGTTGCTGAGTTGTGGAACCAACTCTACTGCT TCGAAGTTTAGTATTTGACTAATTAGTGGTCGATAATATTGATTGATCAA TGCCTTTTTTGAGGTTGTGTTCTGGTCTCGGGATCCAGTGCGTGGCGGCC GTGTGTCGTGTGTTTTTTTTTGTGCGTAGTGTGTGTGCGTGCCGTTGACG TGCTTCTGTTCGAGTAGGTGACACCCTGGACTATCTGTTGTGTGAGCGTT CNNNNNNNNNNTTTTAAACGACTGTTGGAGTGTGCAACCGGACTTGCCTG TATGCTCGTCACAAGGACGTCCCTGCAGGTGCTTGATCGACGCACAAGGA CGTCCCTGCAGGTGCTTGATCGACGCACATCCACTCAGATTCGGCTACCC GGTCTCTGTGACAACCACAGCCACAGCCCACCGCCCCGCGAACGCACCGC TCACTCATGCCCGCCCTCAACACGAAAAAAAAACTGTCCATTTTGTCTTG TTGTATTTTTGTGTAAATAAGGCCGAGAGCGTCACGATCTACTCTCACTT CCTGCACATGCACGAGAACGGGCAGCGGATGGAGACCCGGCAGTACCGCA CCGACAGCGACGGAAACGAGCAGCTGATCGACGCCACCGAGGTCGAGTAC TTCTCCTTCCTGCAGGCCGGCGGCCTAGTGACGGCGCATAACGGAAGCGA TATCATCCAAGTGCGTTTTCGGAGAGGGGCACCATCGCAGCCAAATATGT ACCAACAGAGATAGATCCTCGCGAACACTCACACCATGAACAGCGGTTAC GCTAGGTAGCCCTTGTTCACTGAAATCTTGATTGGCTGTAGTACCTTGAT TTGAAGGCCAGCCTAGTTGTCGCTCTATGGTAGTCAATTCGCGCGTTGGT TTTGGATGTCGTGTGTGGAAGTATGTTTTAGAGCTCTGGGGCCGTGCCGT ACGAATGCATGCAGAAAGCTTGTTGCCGCGGGTCTGAAAAAATGTTCGGT CCGGACGAGCTTTGCGCAGTTACAGTCAACAATAGCAGCTAATGTTGTTC TGCACGCTCACAGTCCCCCGGCACCCCGCGTCGCGTGCCTGTCTAGAGTC ACTCGTCGACTATACCCCAGCTACGTTTGCTGTAGCAATACATGTACTCT GCTGACGCGAAATGCGTTCGTGTTCCCTTGACTGTTTTGTTTTGTTGCTC ATTCTTCAGAAAGGAGACAGGTTCGAAACGATCTGCTACTACGACACCTC CCTCTCCTCGGTGGACTCGGCCAACGTCACCTTTGGCGAGGGGTCGGAAC AAGAGATGTGAGACATAGCAACGTCCTCTACTGCATCGGTACAAAGAGAT TTGGTACTTGTTGCTCGTGCTTCTGCTGCGAAGCACGGTTATTGATACTT GGAGAGGACACGTTTTCGTTCCAGAGCAGTGGTGGGGCCGCTCAAGAGTT GATTGATGGGTCCGTTGTTCGTTTGTTTGTGTGTTGGCTTACAGAGCATG CATGGTGTGTAAGAAGCAAGCGCTGAATGATTTTTCATGCCGGGTTATCG TTTTTGATGTATCGATACACGCAAGAACAAGCGTGTAGCGTATTGTTGAA GGAATCTGCGAACGTCGGATGGCAAACGAAAAAATAAAAAAGGGGGGAAA AGGTTACATAACGTGAGGTTTTGCGCTAGACCATTCTTGGTTCCTGGAAA AGAAAATGAACCGCCAAACGCGCTTGGTGCTGTTCTGAAACCGAAGAGTA CTTCATTTTTTTTTCTCCCATTATTGGACTCTGTCGTCTGTCCCTCTGGC CCCCATCCTCCACTCCTACTAGCTAGACGACCTAGCCGGGGTCACATGAG AGGGGGGTGCTGGGCCCCCTCCTGCGGTAGTATCATATACATACTGACAT GTGTCTGTGAGAAGTCCCGACGTAGACTCGGGGCAGCGTCATCTTTGGCG AAGGGTCGGAGGAAGAGATGCGAGATGTCGCGACATCCTCTACTGTCCCT TTTTGGAGACTGTACATTTCACGTGCACCATTTGCTCTACTGCGTAGTGC CCGCCACCCTTACTCGTTCGAAAAAACGAAAAAACAACGCAACTGTTGTG GGGAAAACACACACACACACACACACATGGCCGGTTAGCGCGGTCGATGC TAATAATAAAGACACACACACACACAGGTGCATGGACTTCTTGTATTACT ACCCGGCCCAAGTCATCCCCGAGGGCGGGTACTGTGGAGGGCTCGGGACC TGCGGCGGCAGCTTCCTGGGCATCACGGCTCTTGAAGACGACACAGACTT CAACCGCACCTTCGGGATCGTGGACTCATGCACGGGGACTCTTGATGAAG ACGAAGACGAACAGGTGAGGCGTTGCATACTGTATCTCCGACGCACTCAT GTATGTTCGTTGAAGACAGGTTGGACAAGGATTGGTGGCGTGTTCAGCAT TGATTGTCGAACTTTGATAAGACGCCGTGTTTGGTTTGGTTTGGCTTGGT GTTGGTTTATCTACCTTGTCGGAGTGATTGACCGACTGATTGATCGTGCA GCAAGACAACAGGAAGTCGCGACATCATTTTGCTCGCTTGCTCTCATACC TGAGATACCCGCGCCCGCCCGCCCGCCCGCCCGCCCCTGAATCTTGGACG GTGGTACTGCAAATATGCAGAACGACGGCACGCTCTCAACAGATTCATCG AGCGTTGCCGCGCTCGGACTCGGCCTCTCGGCCTTTACCATGGCCGTCGC GCTCAGCCTTTCCCCTTGCGTGGTTGATTGGCTGGTTTGA
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1318:13002..18491-

>mRNA_E-fasciculatus_F_contig1318.2400.1 ID=mRNA_E-fasciculatus_F_contig1318.2400.1|Name=mRNA_E-fasciculatus_F_contig1318.2400.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2820bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1318:13002..18491- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GACCCGTACACAGATGTCTTGCCGACGCGACTCCTTGCCGCCTGGGGCGA
CTCCGAGACCATCGGATACCACGCTGCCAATTTCGCGAAGGCAGAGGTCA
TTCTCTACGGCGGGGTCGAGAACTCCAACACCGATCCGATTATCGAGCTC
GCCTCTGACCCGGACGTCACTTTCTTCGATGTCACCGCGGACCCGTACAC
AGATGTCTTGCCGACGCGACTCCTTGCCGCCTGGGGCGACTCCGAGACCA
TCGGATACCACGCTGCCAATTTCGCGAAGGCAGAGGTCATTCTCTACGGC
GGGGTCGAGAACTCCAACACCGATCCGATTATCGAGCTCGCCTCTGACCC
GGACGTCACTTTCTTCGATGTCACCGCGAAAAACTTCACGATCCCGACAA
TCCGCACCCACTACGAGAACTCGTGCATTAATCGCTCGGAACTGCCTGCC
GAAGAGAAAAACTTCACGATCCCGACAATCCGCACCCACTACGAGAACTC
GTGCATTAATCGCTCGGAACTGCCTGCCGAAGAGTTCCACGCGATCGGGT
TCGAGGGTCTCATCCAGGAGTCCACCTCCAAGTATGTGCACCACTTGACG
CTCACGGCCTACACCGGTACGCACAACTGCGGGCAGGACTGCCTCGACTG
GGTTCTGGCAAACCTTCCCGAAGACTACTATTCCGACGACCCTTCCTCCT
CCTCTCCTTCGGCGTACACCGACCCGTACACCTTCAACAACCTGACGATC
CCGGACTTCTGCTACCAACAGTTTGCGAACATTTTCGCGTGGGCGCCAGG
GGCGGCGGACGTCCAGCTGCCAGACTTCGTGGGCTTCCGCTTCGGCAACG
ACTCTTACACGTCCATCAGTTCCACGCGATCGGGTTCGAGGGTCTCATCC
AGGAGTCCACCTCCAAGTATGTGCACCACTTGACGCTCACGGCCTACACC
GGTACGCACAACTGCGGGCAGGACTGCCTCGACTGGGTTCTGGCAAACCT
TCCCGAAGACTACTATTCCGACGACCCTTCCTCCTCCTCTCCTTCGGCGT
ACACCGACCCGTACACCTTCAACAACCTGACGATCCCGGACTTCTGCTAC
CAACAGTTTGCGAACATTTTCGCGTGGGCGCCAGGGGCGGCGGACGTCCA
GCTGCCAGACTTCGTGGGCTTCCGCTTCGGCAACGACTCTTACACGTCCA
TCAGGGTCGAAACACACTACAACAATCCGGATGGGGACGCCGGCGAGATA
GACAGCTCGGGCGTGCGCGTGTACTTCACGGAAGACATGCGCGAAATGGA
TATGGGTGTACTCACCCTGGGAGACCCGAACATCGACCTCATCGGGACCC
AGTTGCCGGAGGGGAAATCGTCCGTGGAGTTCGACTGCCCCGCCGCTTGC
ACCGAGACTTACTTCGACGGTCGAAACACACTACAACAATCCGGATGGGG
ACGCCGGCGAGATAGACAGCTCGGGCGTGCGCGTGTACTTCACGGAAGAC
ATGCGCGAAATGGATATGGGTGTACTCACCCTGGGAGACCCGAACATCGA
CCTCATCGGGACCCAGTTGCCGGAGGGGAAATCGTCCGTGGAGTTCGACT
GCCCCGCCGCTTGCACCGAGACTTACTTCGACGCCGAGAGCGTCACGATC
TACTCTCACTTCCTGCACATGCACGAGAACGGGCAGCGGATGGAGACCCG
GCAGTACCGCACCGACAGCGACGGAAACGAGCAGCTGATCGACGCCACCG
AGGTCGAGTACTTCTCCTTCCTGCAGGCCGGCGGCCTAGTGACGGCGCAT
AACGGAAGCGATATCATCCAAGCCGAGAGCGTCACGATCTACTCTCACTT
CCTGCACATGCACGAGAACGGGCAGCGGATGGAGACCCGGCAGTACCGCA
CCGACAGCGACGGAAACGAGCAGCTGATCGACGCCACCGAGGTCGAGTAC
TTCTCCTTCCTGCAGGCCGGCGGCCTAGTGACGGCGCATAACGGAAGCGA
TATCATCCAAAAAGGAGACAGGTTCGAAACGATCTGCTACTACGACACCT
CCCTCTCCTCGGTGGACTCGGCCAACGTCACCTTTGGCGAGGGGTCGGAA
CAAGAGATAAAGGAGACAGGTTCGAAACGATCTGCTACTACGACACCTCC
CTCTCCTCGGTGGACTCGGCCAACGTCACCTTTGGCGAGGGGTCGGAACA
AGAGATGTGCATGGACTTCTTGTATTACTACCCGGCCCAAGTCATCCCCG
AGGGCGGGTACTGTGGAGGGCTCGGGACCTGCGGCGGCAGCTTCCTGGGC
ATCACGGCTCTTGAAGACGACACAGACTTCAACCGCACCTTCGGGATCGT
GGACTCATGCACGGGGACTCTTGATGAAGACGAAGACGAACAGGTGCATG
GACTTCTTGTATTACTACCCGGCCCAAGTCATCCCCGAGGGCGGGTACTG
TGGAGGGCTCGGGACCTGCGGCGGCAGCTTCCTGGGCATCACGGCTCTTG
AAGACGACACAGACTTCAACCGCACCTTCGGGATCGTGGACTCATGCACG
GGGACTCTTGATGAAGACGAAGACGAACAGAACGACGGCACGCTCTCAAC
AGATTCATCGAGCGTTGCCGCGCTCGGACTCGGCCTCTCGGCCTTTACCA
TGGCCGTCGCGCTCAGCCTTTCCCCTTGCGTGGTTGATTGGCTGGTTTGA
AACGACGGCACGCTCTCAACAGATTCATCGAGCGTTGCCGCGCTCGGACT
CGGCCTCTCGGCCTTTACCATGGCCGTCGCGCTCAGCCTTTCCCCTTGCG
TGGTTGATTGGCTGGTTTGA
back to top