mRNA_E-fasciculatus_F_contig13178.2397.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13178.2397.1 vs. uniprot
Match: A0A6H5KV80_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KV80_9PHAE) HSP 1 Score: 327 bits (837), Expect = 1.450e-102 Identity = 160/163 (98.16%), Postives = 161/163 (98.77%), Query Frame = 1
Query: 49 EGGWGSRGPPERPPPSYAEVLEFYSYVFKTAQLEKDCVIMSLVYIERVLTETAGKLRIFRKNWRSVVLCGLILASKIWDDLSMWNCDFSKVGRCSLRRINELEVAVLQVLQYNVRVASSLFASYYFRMRHWCILLGVETPGLYDASPPRRRSESFRATEALAI 537
EGGWGSRGPPERPPPSYAEVLEFYSYVFKTAQLEKDCVIMSLVYIERVLTETAGKLRIF KNWRSVVLCGLILASKIWDDLSMWNCDFSKVGRCSLRRINELEVAVLQVLQYNVRVASSLFASYYFRMRHWCILLGVETPGLYD SPPRRRSESF+ATEALAI
Sbjct: 260 EGGWGSRGPPERPPPSYAEVLEFYSYVFKTAQLEKDCVIMSLVYIERVLTETAGKLRIFGKNWRSVVLCGLILASKIWDDLSMWNCDFSKVGRCSLRRINELEVAVLQVLQYNVRVASSLFASYYFRMRHWCILLGVETPGLYDTSPPRRRSESFKATEALAI 422
BLAST of mRNA_E-fasciculatus_F_contig13178.2397.1 vs. uniprot
Match: A0A836C9Q1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9Q1_9STRA) HSP 1 Score: 178 bits (451), Expect = 1.820e-48 Identity = 81/123 (65.85%), Postives = 105/123 (85.37%), Query Frame = 1
Query: 91 PSYAEVLEFYSYVFKTAQLEKDCVIMSLVYIERVLTETAGKLRIFRKNWRSVVLCGLILASKIWDDLSMWNCDFSKVGRCSLRRINELEVAVLQVLQYNVRVASSLFASYYFRMRHWCILLGV 459
P++ +V +F+SY+++TAQLE DCV+ SL YIER+L ETAG+LR+ R NWRS+ L G+ILASK+WDDLSMW+ DF++VGR +L+RINELEVAVLQ LQYNVRV SS FA Y+FR+R+WC+LL
Sbjct: 262 PTFEQVHDFFSYIYRTAQLECDCVVTSLFYIERLLMETAGELRMCRTNWRSITLSGMILASKVWDDLSMWSVDFARVGRLTLKRINELEVAVLQALQYNVRVDSSNFARYFFRLRNWCLLLNA 384
BLAST of mRNA_E-fasciculatus_F_contig13178.2397.1 vs. uniprot
Match: A0A7S2LBG9_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LBG9_9STRA) HSP 1 Score: 135 bits (339), Expect = 3.520e-35 Identity = 63/137 (45.99%), Postives = 93/137 (67.88%), Query Frame = 1
Query: 91 PSYAEVLEFYSYVFKTAQLEKDCVIMSLVYIERVLTETAGKLRIFRKNWRSVVLCGLILASKIWDDLSMWNCDFSKVGRC----SLRRINELEVAVLQVLQYNVRVASSLFASYYFRMRHWCILLGVETPGLYDASP 489
P+ V +FY +F +Q+E +C+I+SL+Y+ER++ ++ G+LR NWRS++ ++LASK+WDDLSMWNCDFSK+G C SL+R NELE+A+L LQY V+V +S +A YYF +R G+ L +P
Sbjct: 152 PTLEAVTDFYRSIFVRSQMEIECIIISLIYVERLIKKSKGELRPQSDNWRSILFSCMVLASKVWDDLSMWNCDFSKIGPCGMTFSLQRTNELEIALLSALQYRVKVGASEYAKYYFLLRGMLCRSGLANDDLTRLNP 288
BLAST of mRNA_E-fasciculatus_F_contig13178.2397.1 vs. uniprot
Match: A0A7S2SV86_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV86_9STRA) HSP 1 Score: 135 bits (339), Expect = 2.550e-34 Identity = 63/130 (48.46%), Postives = 96/130 (73.85%), Query Frame = 1
Query: 73 PPERPPPSYAEVLEFYSYVFKTAQLEKDCVIMSLVYIERVLTETAGKLRIFRKNWRSVVLCGLILASKIWDDLSMWNCDFSKV-GRCSLRRINELEVAVLQVLQYNVRVASSLFASYYFRMRHWCILLGV 459
P + P PS E++ F+ ++ +Q+E +C+IMSL+Y+ERV T G +++ NW+S+++ +I+ASK+WDDLSMWN DFS+V +LRRINELE+A+L VL Y V+VA+S +A YYF +R +C+ LG+
Sbjct: 247 PEDMPVPSLQELVTFFREIYVKSQMEIECIIMSLIYLERVTKVTKGSIQVRPNNWKSLLVSTMIMASKVWDDLSMWNADFSQVCPSFTLRRINELELALLDVLGYIVKVAASDYAKYYFHIRSYCVRLGL 376
BLAST of mRNA_E-fasciculatus_F_contig13178.2397.1 vs. uniprot
Match: A0A7S2S551_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S551_9STRA) HSP 1 Score: 130 bits (328), Expect = 6.700e-34 Identity = 64/137 (46.72%), Postives = 94/137 (68.61%), Query Frame = 1
Query: 91 PSYAEVLEFYSYVFKTAQLEKDCVIMSLVYIERVLTETAGKLRIFRKNWRSVVLCGLILASKIWDDLSMWNCDFSKVGRC----SLRRINELEVAVLQVLQYNVRVASSLFASYYFRMRHWCILLGVETPGLYDASP 489
P+ ++ FY VF +Q+E DC+I+SL+YIER++ +T G++R +NWRSV+ ++L+SK+WDDLSMWNCDFSK+G SL+R N+LEVA+L L+Y V+V +S +A YYF +R G+ + L SP
Sbjct: 108 PTLDDITAFYRDVFLRSQMEVDCIIISLIYIERLIKKTDGEVRPNVRNWRSVLFSCMVLSSKVWDDLSMWNCDFSKIGPSGVTFSLQRTNQLEVALLSHLEYKVKVNASEYAKYYFLLRSMLCRSGLASDTLSSLSP 244
BLAST of mRNA_E-fasciculatus_F_contig13178.2397.1 vs. uniprot
Match: A0A7S3DPP7_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DPP7_9STRA) HSP 1 Score: 129 bits (324), Expect = 7.670e-34 Identity = 67/137 (48.91%), Postives = 90/137 (65.69%), Query Frame = 1
Query: 91 PSYAEVLEFYSYVFKTAQLEKDCVIMSLVYIERVLTETAGKLRIFRKNWRSVVLCGLILASKIWDDLSMWNCDFSKVGRC----SLRRINELEVAVLQVLQYNVRVASSLFASYYFRMRHWCILLGVETPGLYDASP 489
PS ++ FY VF AQ+E DCVIMSL+Y+ER++ T G LR NWRSV+ ++LASK+WDDLSMWN DFS+ +L+RINELE+AVL L+Y V+V +S +A YYF +R I G+ L + +P
Sbjct: 62 PSLDDITTFYRDVFGRAQMESDCVIMSLIYVERLIKNTRGNLRPRATNWRSVLFSCMVLASKVWDDLSMWNGDFSQTCPAGVTFTLQRINELELAVLDALEYIVKVPASEYAKYYFLLRSMLIKSGLGGEDLNEMNP 198
BLAST of mRNA_E-fasciculatus_F_contig13178.2397.1 vs. uniprot
Match: A0A485KJY8_9STRA (Aste57867_8288 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KJY8_9STRA) HSP 1 Score: 133 bits (335), Expect = 1.150e-33 Identity = 64/139 (46.04%), Postives = 96/139 (69.06%), Query Frame = 1
Query: 85 PPPSYAEVLEFYSYVFKTAQLEKDCVIMSLVYIERVLTETAGK-LRIFRKNWRSVVLCGLILASKIWDDLSMWNCDFSKV--GRCSLRRINELEVAVLQVLQYNVRVASSLFASYYFRMRHWCILLGVETPGLYDASPP 492
PPPS +L+F + V++TAQ+E +C+IMSL+Y+ER+L TAG+ L++ NW ++V C +++ASK+WDDLSM N DFSK+ G LRRIN LE+ L ++YNVRV+++ +A YYF +R L + +D + P
Sbjct: 250 PPPSVDAILQFMTQVYRTAQMESECIIMSLIYVERLLQATAGRGLQLRGSNWPAIVFCSMVMASKVWDDLSMCNADFSKIFHGMFPLRRINALELLYLDAVEYNVRVSAASYAKYYFHLRSIYKSLKLGQLSAFDTNTP 388
BLAST of mRNA_E-fasciculatus_F_contig13178.2397.1 vs. uniprot
Match: K3X1X9_GLOUD (WW domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X1X9_GLOUD) HSP 1 Score: 135 bits (340), Expect = 1.250e-33 Identity = 63/135 (46.67%), Postives = 92/135 (68.15%), Query Frame = 1
Query: 91 PSYAEVLEFYSYVFKTAQLEKDCVIMSLVYIERVLTETAGKLRIFRKNWRSVVLCGLILASKIWDDLSMWNCDFSKVG-RCSLRRINELEVAVLQVLQYNVRVASSLFASYYFRMRHWCILLGVETPGLYDASPP 492
PS E+ +VF AQ+E +C+IMSL+Y+ER+L T+G L++ NWRS++ C +++ASK+WDDLSM N DFSK+ SL+ INELE+A L ++YNVRV++ +A YYF +R C +G+ +D S P
Sbjct: 507 PSLKEIAAVIKHVFSRAQMESECIIMSLIYVERLLKATSGSLQLLGYNWRSILFCSMVMASKVWDDLSMCNADFSKIWPELSLKEINELELAYLSAVEYNVRVSAVSYAKYYFHLRSMCASMGMLAA--FDESAP 639
BLAST of mRNA_E-fasciculatus_F_contig13178.2397.1 vs. uniprot
Match: H6S3Z7_PLAVT (Cyclin (Fragment) n=1 Tax=Plasmopara viticola TaxID=143451 RepID=H6S3Z7_PLAVT) HSP 1 Score: 127 bits (319), Expect = 1.900e-33 Identity = 61/123 (49.59%), Postives = 88/123 (71.54%), Query Frame = 1
Query: 127 VFKTAQLEKDCVIMSLVYIERVLTETAGKLRIFRKNWRSVVLCGLILASKIWDDLSMWNCDFSKVG-RCSLRRINELEVAVLQVLQYNVRVASSLFASYYFRMRHWCILLGVETPGLYDASPP 492
V AQ+E +C+IMSLVY+ER+L T+G L++ +NWR +V C +++ASK+WDDLSM N DFSK+ SL++INELE+ L+ ++YNVRV++ +A YYF +R C LLG+ +D S P
Sbjct: 5 VLSRAQMESECIIMSLVYVERLLKTTSGFLQLRGENWRRLVFCSMVMASKVWDDLSMTNADFSKIWPELSLKQINELELVYLRAVEYNVRVSAVSYAKYYFHLRSMCALLGLVAA--FDESAP 125
BLAST of mRNA_E-fasciculatus_F_contig13178.2397.1 vs. uniprot
Match: A0A7S1UIR8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UIR8_9STRA) HSP 1 Score: 134 bits (338), Expect = 2.850e-33 Identity = 66/133 (49.62%), Postives = 90/133 (67.67%), Query Frame = 1
Query: 64 SRGPPERPPPSYAEVLEFYSYVFKTAQLEKDCVIMSLVYIERVLTETAGKLRIFRKNWRSVVLCGLILASKIWDDLSMWNCDFSKVGRCSLRRINELEVAVLQVLQYNVRVASSLFASYYFRMRHWCILLGVE 462
S+G P P P + FY YVF TAQLE+ C+I S +YIER L T+G+L + NWRSV+L GL LASKIWDD SMWN DFS VG +L +IN LE+A+L +Q++V + +L+ YY+ +R+ I L ++
Sbjct: 142 SKGVPVAPSPEL--MYTFYKYVFDTAQLEEMCIITSTIYIERALHMTSGRLLLTSSNWRSVLLAGLALASKIWDDFSMWNADFSDVGNITLTKINSLELAILSAIQWDVHIPRNLYTHYYYALRNLVIKLDLK 272 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13178.2397.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13178.2397.1 >prot_E-fasciculatus_F_contig13178.2397.1 ID=prot_E-fasciculatus_F_contig13178.2397.1|Name=mRNA_E-fasciculatus_F_contig13178.2397.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=179bp GVANGGGGLHAVGRGGEGGWGSRGPPERPPPSYAEVLEFYSYVFKTAQLEback to top mRNA from alignment at E-fasciculatus_F_contig13178:134..3728- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13178.2397.1 ID=mRNA_E-fasciculatus_F_contig13178.2397.1|Name=mRNA_E-fasciculatus_F_contig13178.2397.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3595bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13178:134..3728- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13178:134..3728- >mRNA_E-fasciculatus_F_contig13178.2397.1 ID=mRNA_E-fasciculatus_F_contig13178.2397.1|Name=mRNA_E-fasciculatus_F_contig13178.2397.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1074bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13178:134..3728- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |