prot_E-fasciculatus_F_contig13175.2395.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13175.2395.1
Unique Nameprot_E-fasciculatus_F_contig13175.2395.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length90
Homology
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BLAST of mRNA_E-fasciculatus_F_contig13175.2395.1 vs. uniprot
Match: D7FH45_ECTSI (ERCC4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH45_ECTSI)

HSP 1 Score: 58.9 bits (141), Expect = 4.000e-8
Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = 0 
Query:    1 GGRRKAQASLRVVVDLREFRSVLPNLLHQ 29
            GGRRKAQASLRVVVDLREFRSVLPNLLHQ
Sbjct:  897 GGRRKAQASLRVVVDLREFRSVLPNLLHQ 925
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BLAST of mRNA_E-fasciculatus_F_contig13175.2395.1 vs. uniprot
Match: A0A6H5JEA6_9PHAE (ERCC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEA6_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 1.910e-7
Identity = 28/29 (96.55%), Postives = 28/29 (96.55%), Query Frame = 0 
Query:    1 GGRRKAQASLRVVVDLREFRSVLPNLLHQ 29
            GGRRKAQA LRVVVDLREFRSVLPNLLHQ
Sbjct:  988 GGRRKAQAPLRVVVDLREFRSVLPNLLHQ 1016
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13175.2395.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FH45_ECTSI4.000e-8100.00ERCC4 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JEA6_9PHAE1.910e-796.55ERCC4 domain-containing protein n=1 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13175contigE-fasciculatus_F_contig13175:2100..3570 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13175.2395.1mRNA_E-fasciculatus_F_contig13175.2395.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13175 1930..3570 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13175.2395.1 ID=prot_E-fasciculatus_F_contig13175.2395.1|Name=mRNA_E-fasciculatus_F_contig13175.2395.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=90bp
GGRRKAQASLRVVVDLREFRSVLPNLLHQACAGPVGHNGRRLRLDAPDLR
RTKEPVRLVPVHVVRQAVRAGGSNTEALQGARLADRDQP*
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