prot_E-fasciculatus_F_contig13175.2394.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13175.2394.1
Unique Nameprot_E-fasciculatus_F_contig13175.2394.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length61
Homology
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BLAST of mRNA_E-fasciculatus_F_contig13175.2394.1 vs. uniprot
Match: D7FH45_ECTSI (ERCC4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH45_ECTSI)

HSP 1 Score: 53.5 bits (127), Expect = 9.890e-7
Identity = 23/27 (85.19%), Postives = 25/27 (92.59%), Query Frame = 0 
Query:    1 RDEADLHHLAAYAPDPPLPSAPHPVVQ 27
            RD+ADLHH+AAYA  PPLPSAPHPVVQ
Sbjct: 1026 RDQADLHHIAAYASYPPLPSAPHPVVQ 1052
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13175.2394.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FH45_ECTSI9.890e-785.19ERCC4 domain-containing protein n=1 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13175contigE-fasciculatus_F_contig13175:1494..1916 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13175.2394.1mRNA_E-fasciculatus_F_contig13175.2394.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13175 1494..1916 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13175.2394.1 ID=prot_E-fasciculatus_F_contig13175.2394.1|Name=mRNA_E-fasciculatus_F_contig13175.2394.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=61bp
RDEADLHHLAAYAPDPPLPSAPHPVVQVGTRDRRHFQGAHGEQRRGRRGE
GSGGRGRRRG*
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