prot_E-fasciculatus_F_contig13171.2390.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13171.2390.1
Unique Nameprot_E-fasciculatus_F_contig13171.2390.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length105
Homology
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BLAST of mRNA_E-fasciculatus_F_contig13171.2390.1 vs. uniprot
Match: A0A6H5LAX6_9PHAE (EF-hand domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LAX6_9PHAE)

HSP 1 Score: 127 bits (319), Expect = 1.110e-32
Identity = 70/92 (76.09%), Postives = 80/92 (86.96%), Query Frame = 0 
Query:   18 AQAMGVEDPDTAVKTQGGSGATN----SAHQDSTGDNNESGVASRMNVEVGLGVFYFLLLVGVGTTVFMVYGHMSVIDAFYLTVVSSSTVGY 105
            AQAMGV+ PDTA+KTQ GSGATN    +A QD+ GDN++  + + +NVEVGLGVFYF+LLVGVGTTVFMVYGHMSVIDAFYLTVVSSSTVGY
Sbjct:  231 AQAMGVDYPDTAMKTQWGSGATNGGTPAAQQDTAGDNDDIALVNSINVEVGLGVFYFVLLVGVGTTVFMVYGHMSVIDAFYLTVVSSSTVGY 322
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13171.2390.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5LAX6_9PHAE1.110e-3276.09EF-hand domain-containing protein n=2 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.287.70coord: 7..105
e-value: 5.4E-7
score: 31.0
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..62
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 63..84
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 85..105
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 59..105
NoneNo IPR availableTMHMMTMhelixcoord: 63..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13171contigE-fasciculatus_F_contig13171:1..1177 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13171.2390.1mRNA_E-fasciculatus_F_contig13171.2390.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13171 1..1177 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13171.2390.1 ID=prot_E-fasciculatus_F_contig13171.2390.1|Name=mRNA_E-fasciculatus_F_contig13171.2390.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=105bp
MFSPQEDLLVNLLKKNRAQAMGVEDPDTAVKTQGGSGATNSAHQDSTGDN
NESGVASRMNVEVGLGVFYFLLLVGVGTTVFMVYGHMSVIDAFYLTVVSS
STVGY
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