prot_E-fasciculatus_F_contig13164.2387.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13164.2387.1
Unique Nameprot_E-fasciculatus_F_contig13164.2387.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length111
Homology
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BLAST of mRNA_E-fasciculatus_F_contig13164.2387.1 vs. uniprot
Match: D7G5Q7_ECTSI (Tha4/Hcf106 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5Q7_ECTSI)

HSP 1 Score: 194 bits (493), Expect = 1.390e-61
Identity = 105/111 (94.59%), Postives = 109/111 (98.20%), Query Frame = 0 
Query:    1 MKVACCVLVWACALAARAAEAFVPALSGRAGIMSAAGRQASMSPAAAGRQNAFSHTSYGAPAQAPASRWLSGRPSSGASTTTMGLFGLGAPEIAVCIAVAALILGPDKMAG 111
            MK+ACCVLVWACALAAR AEAFVPAL+GRAGIMSAAGRQASMSPAAAGRQNAFSHTSYG+PAQA +SRWLSGRPSSGASTTTMGLFGLGAPEIAVCIAVAALILGPDKMAG
Sbjct:    1 MKLACCVLVWACALAARVAEAFVPALAGRAGIMSAAGRQASMSPAAAGRQNAFSHTSYGSPAQAQSSRWLSGRPSSGASTTTMGLFGLGAPEIAVCIAVAALILGPDKMAG 111
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BLAST of mRNA_E-fasciculatus_F_contig13164.2387.1 vs. uniprot
Match: A0A7S2XUZ2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUZ2_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 1.480e-6
Identity = 25/33 (75.76%), Postives = 29/33 (87.88%), Query Frame = 0 
Query:   77 GASTTTMGLFGLGAPEIAVCIAVAALILGPDKM 109
            G S+  MGLFGLGAPEIAVC+ VAAL+LGPDK+
Sbjct:   61 GRSSIQMGLFGLGAPEIAVCVIVAALVLGPDKL 93
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BLAST of mRNA_E-fasciculatus_F_contig13164.2387.1 vs. uniprot
Match: A0A6V1V9D4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1V9D4_HETAK)

HSP 1 Score: 49.7 bits (117), Expect = 4.550e-5
Identity = 24/35 (68.57%), Postives = 29/35 (82.86%), Query Frame = 0 
Query:   77 GASTTTMGLFGLGAPEIAVCIAVAALILGPDKMAG 111
            GA++  M LFGL APE+ VC+AVAALILGPDK+ G
Sbjct:   65 GAASLQMQLFGLSAPELLVCLAVAALILGPDKLIG 99
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13164.2387.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G5Q7_ECTSI1.390e-6194.59Tha4/Hcf106 protein n=2 Tax=Ectocarpus TaxID=2879 ... [more]
A0A7S2XUZ2_9STRA1.480e-675.76Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6V1V9D4_HETAK4.550e-568.57Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..82
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 106..111
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..18
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 83..105
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.787
NoneNo IPR availableTMHMMTMhelixcoord: 83..105

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13164contigE-fasciculatus_F_contig13164:6..889 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13164.2387.1mRNA_E-fasciculatus_F_contig13164.2387.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13164 6..889 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13164.2387.1 ID=prot_E-fasciculatus_F_contig13164.2387.1|Name=mRNA_E-fasciculatus_F_contig13164.2387.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=111bp
MKVACCVLVWACALAARAAEAFVPALSGRAGIMSAAGRQASMSPAAAGRQ
NAFSHTSYGAPAQAPASRWLSGRPSSGASTTTMGLFGLGAPEIAVCIAVA
ALILGPDKMAG
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