prot_E-fasciculatus_F_contig1316.2386.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1316.2386.1
Unique Nameprot_E-fasciculatus_F_contig1316.2386.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length119
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1316.2386.1 vs. uniprot
Match: A0A6H5JRK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRK9_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 2.030e-7
Identity = 55/87 (63.22%), Postives = 56/87 (64.37%), Query Frame = 0 
Query:   34 MGAGGRARLLAACLPTVLMAGAGTVSGVLVSTQVQQQGEQQQVLGVHEVGKSRHGGXXXXXXXXXSRLRGAG-STNASFGFAGPPPA 119
            M  GG ARLLAA LP VLM GAGTVSGVLVSTQ+QQ                    XXXXXXXXXS LRGAG STN SFG AGPP A
Sbjct:    1 MRTGGIARLLAAWLPAVLMGGAGTVSGVLVSTQLQQXXX----XXXXXXXXXXXXXXXXXXXXXXSHLRGAGISTNPSFGSAGPPSA 83
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1316.2386.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JRK9_9PHAE2.030e-763.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 64..119
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..41
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 42..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1316contigE-fasciculatus_F_contig1316:15472..17904 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1316.2386.1mRNA_E-fasciculatus_F_contig1316.2386.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1316 15472..17904 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1316.2386.1 ID=prot_E-fasciculatus_F_contig1316.2386.1|Name=mRNA_E-fasciculatus_F_contig1316.2386.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=119bp
GRESFRSYTRPSAFSDQLTHTAFLATTEAGEEIMGAGGRARLLAACLPTV
LMAGAGTVSGVLVSTQVQQQGEQQQVLGVHEVGKSRHGGGGGGGVNNNSR
LRGAGSTNASFGFAGPPPA
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