mRNA_E-fasciculatus_F_contig13072.2329.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig13072.2329.1
Unique NamemRNA_E-fasciculatus_F_contig13072.2329.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig13072.2329.1 vs. uniprot
Match: A0A6H5KWX9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWX9_9PHAE)

HSP 1 Score: 394 bits (1011), Expect = 2.190e-136
Identity = 193/194 (99.48%), Postives = 193/194 (99.48%), Query Frame = 1 
Query:    1 VQIVQRTETSFVRTGELEHPYPPTKIMWSPDKSLNSTDLLATTGDYLRLWSVDEQEPGGVKLHSLLNNNTNAEYCSPLTSFDWCDADPSTVGTSSIDTTCTIWDVATGTPKTQLIAHDKEVYDIAFARTKDIFASVGADGSVRMFDLRSLEHSTIIYETHDLTPLMRLSWNKQDPNYLATILTDSAKTVILDIR 582
            VQIVQRTETSFVRTGELEHPYPPTKIMWSPDKSLNS DLLATTGDYLRLWSVDEQEPGGVKLHSLLNNNTNAEYCSPLTSFDWCDADPSTVGTSSIDTTCTIWDVATGTPKTQLIAHDKEVYDIAFARTKDIFASVGADGSVRMFDLRSLEHSTIIYETHDLTPLMRLSWNKQDPNYLATILTDSAKTVILDIR
Sbjct:   52 VQIVQRTETSFVRTGELEHPYPPTKIMWSPDKSLNSPDLLATTGDYLRLWSVDEQEPGGVKLHSLLNNNTNAEYCSPLTSFDWCDADPSTVGTSSIDTTCTIWDVATGTPKTQLIAHDKEVYDIAFARTKDIFASVGADGSVRMFDLRSLEHSTIIYETHDLTPLMRLSWNKQDPNYLATILTDSAKTVILDIR 245
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13072.2329.1 vs. uniprot
Match: D8LR84_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR84_ECTSI)

HSP 1 Score: 394 bits (1011), Expect = 1.710e-134
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 1 
Query:    1 VQIVQRTETSFVRTGELEHPYPPTKIMWSPDKSLNSTDLLATTGDYLRLWSVDEQEPGGVKLHSLLNNNTNAEYCSPLTSFDWCDADPSTVGTSSIDTTCTIWDVATGTPKTQLIAHDKEVYDIAFARTKDIFASVGADGSVRMFDLRSLEHSTIIYETHDLTPLMRLSWNKQDPNYLATILTDSAKTVILDI 579
            VQIVQRTETSFVRTGELEHPYPPTKIMWSPDKSLNSTDLLATTGDYLRLWSVDEQEPGGVKLHSLLNNNTNAEYCSPLTSFDWCDADPSTVGTSSIDTTCTIWDVATGTPKTQLIAHDKEVYDIAFARTKDIFASVGADGSVRMFDLRSLEHSTIIYETHDLTPLMRLSWNKQDPNYLATILTDSAKTVILDI
Sbjct:   52 VQIVQRTETSFVRTGELEHPYPPTKIMWSPDKSLNSTDLLATTGDYLRLWSVDEQEPGGVKLHSLLNNNTNAEYCSPLTSFDWCDADPSTVGTSSIDTTCTIWDVATGTPKTQLIAHDKEVYDIAFARTKDIFASVGADGSVRMFDLRSLEHSTIIYETHDLTPLMRLSWNKQDPNYLATILTDSAKTVILDI 244
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13072.2329.1 vs. uniprot
Match: A0A6V1NZ18_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NZ18_HETAK)

HSP 1 Score: 283 bits (725), Expect = 7.960e-93
Identity = 139/196 (70.92%), Postives = 161/196 (82.14%), Query Frame = 1 
Query:    1 VQIVQRTETS--FVRTGELEHPYPPTKIMWSPDKSLNSTDLLATTGDYLRLWSVDEQEPGGVKLHSLLNNNTNAEYCSPLTSFDWCDADPSTVGTSSIDTTCTIWDVATGTPKTQLIAHDKEVYDIAFARTKDIFASVGADGSVRMFDLRSLEHSTIIYETHDLTPLMRLSWNKQDPNYLATILTDSAKTVILDIR 582
            V+I+Q+ E S  F   GE  HPYPPTKIM+SP ++  + DLLATTGDYLRLW++       V+L +LLNNN N+EYCSPLTSFDW + DPS +GTSSIDTTCTIWDV TG  KTQLIAHDKEVYDI+FA +KDIFASVGADGSVR+FDLRSLEHSTIIYET  LTPL+RL+WNKQDPNYL  I+TDS  TV+LD+R
Sbjct:   62 VRIIQKAENSDQFNLIGEFSHPYPPTKIMFSPQRTDVTKDLLATTGDYLRLWNITGNSEEPVRLETLLNNNKNSEYCSPLTSFDWNETDPSIIGTSSIDTTCTIWDVNTGQAKTQLIAHDKEVYDISFAHSKDIFASVGADGSVRLFDLRSLEHSTIIYETQGLTPLLRLAWNKQDPNYLGCIMTDSPTTVLLDVR 257
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BLAST of mRNA_E-fasciculatus_F_contig13072.2329.1 vs. uniprot
Match: F0Y4A6_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4A6_AURAN)

HSP 1 Score: 277 bits (708), Expect = 9.680e-90
Identity = 137/195 (70.26%), Postives = 158/195 (81.03%), Query Frame = 1 
Query:   19 TETSFVRTGELEHPYPPTKIMWSPDKSLNSTDLLATTGDYLRLWSV-------DEQEPGGVKLHSLLNNNTNAEYCSPLTSFDWCDADPSTVGTSSIDTTCTIWDVATGTPKTQLIAHDKEVYDIAFARTKDIFASVGADGSVRMFDLRSLEHSTIIYETHDLTPLMRLSWNKQDPNYLATILTDSAKTVILDIR 582
            +E +FV  GE EHPYP TKIMWSPD++ +  DLLATTGDYLR+WSV       D +    V++ +LLNNN N+EYC+PLTSFDW D +PS VGTSSIDTTCTIWD++    KTQLIAHDKEVYDIAFAR KDIFASVGADGSVR+FDLR+LEHSTIIYET  L PL+RL+WNKQDPNYLA IL D  +TVILD+R
Sbjct:  102 SEAAFVTVGEFEHPYPATKIMWSPDRT-SRRDLLATTGDYLRVWSVPDQREASDAESASSVEMVALLNNNKNSEYCAPLTSFDWNDTEPSLVGTSSIDTTCTIWDLSVPAVKTQLIAHDKEVYDIAFARGKDIFASVGADGSVRLFDLRTLEHSTIIYETSSLRPLLRLAWNKQDPNYLAAILADDPRTVILDVR 295
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BLAST of mRNA_E-fasciculatus_F_contig13072.2329.1 vs. uniprot
Match: A0A7S2Y0K5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0K5_9STRA)

HSP 1 Score: 273 bits (697), Expect = 1.080e-88
Identity = 139/198 (70.20%), Postives = 160/198 (80.81%), Query Frame = 1 
Query:    1 VQIVQRTETS--FVRTGELEHPYPPTKIMWSPDKSLNSTDLLATTGDYLRLWSVDEQEP-GGVKLHSLLNNNTNAEYCSPLTSFDWCDADPSTVGTSSIDTTCTIWDVATGTPKTQLIAHDKEVYDIAFART-KDIFASVGADGSVRMFDLRSLEHSTIIYETHDLTPLMRLSWNKQDPNYLATILTDSAKTVILDIR 582
            VQ++QR E S  F   GE++H YPPTKIM+SP  S  S DL+ATTGDYLRLW +D   P   V + +LLNN  N+EYCSPLTSFDW + DPS +GTSSIDTTCTIWD+A    +TQLIAHDK VYDIA+AR  +D+FASVG DGSVRMFDLRSLEHSTIIYET DLTPL+RL+WNKQDPNYLA ILTDS+ TVI+DIR
Sbjct:   52 VQVIQRMEDSQHFSLIGEVDHSYPPTKIMFSPQASGVSRDLMATTGDYLRLWKIDSSNPLNPVTMEALLNNTKNSEYCSPLTSFDWNEVDPSILGTSSIDTTCTIWDLAAEQARTQLIAHDKAVYDIAWARGGRDVFASVGGDGSVRMFDLRSLEHSTIIYETADLTPLLRLAWNKQDPNYLAAILTDSSMTVIVDIR 249
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BLAST of mRNA_E-fasciculatus_F_contig13072.2329.1 vs. uniprot
Match: A0A7S1FP62_9STRA (Hypothetical protein (Fragment) n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FP62_9STRA)

HSP 1 Score: 272 bits (696), Expect = 3.880e-88
Identity = 136/204 (66.67%), Postives = 162/204 (79.41%), Query Frame = 1 
Query:    1 VQIVQRT------ETSFVRTGELEHPYPPTKIMWSPDKSLNSTDLLATTGDYLRLWSV--DEQEPGGV--KLHSLLNNNTNAEYCSPLTSFDWCDADPSTVGTSSIDTTCTIWDVATGTPKTQLIAHDKEVYDIAFARTKDIFASVGADGSVRMFDLRSLEHSTIIYETHDLTPLMRLSWNKQDPNYLATILTDSAKTVILDIR 582
            VQI++RT      E  F +  E EHPYP TKI+WSPD+S    D++AT+GDYLR+W++  D  + G +  K  +LLNNN N+EYC+PLTSFDW + DP+ VGTSSIDTTCTIWD+ TG  KTQLIAHDKEV+DIAFAR KD+FASVGADGSVRMFDLRSLEHSTIIYE+  L PL+RL WNKQDPNYL+T + DS KT+ILDIR
Sbjct:   53 VQIIKRTYGTDSHEGRFYKACEFEHPYPCTKILWSPDQSTGGRDIVATSGDYLRVWNLTDDGHQRGTLIPKKEALLNNNKNSEYCAPLTSFDWNETDPTIVGTSSIDTTCTIWDIQTGAAKTQLIAHDKEVFDIAFARGKDVFASVGADGSVRMFDLRSLEHSTIIYESPQLDPLLRLCWNKQDPNYLSTFMVDSYKTIILDIR 256
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BLAST of mRNA_E-fasciculatus_F_contig13072.2329.1 vs. uniprot
Match: A0A835ZHY0_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHY0_9STRA)

HSP 1 Score: 271 bits (693), Expect = 3.970e-88
Identity = 130/200 (65.00%), Postives = 158/200 (79.00%), Query Frame = 1 
Query:    1 VQIVQRTETSFVRTGELEHPYPPTKIMWSPDKSLNSTDLLATTGDYLRLWSVDEQEPGGVKLHSLLNNNTN------AEYCSPLTSFDWCDADPSTVGTSSIDTTCTIWDVATGTPKTQLIAHDKEVYDIAFARTKDIFASVGADGSVRMFDLRSLEHSTIIYETHDLTPLMRLSWNKQDPNYLATILTDSAKTVILDIR 582
            V IVQ+ E+ F + GE    YPPTK+MW+P K   + DL+AT+ D L+LW V +  P GV+LH+ L    +       EYCSPLTSFDW +ADP+ +GTSSIDTTCTIWDV  G P+TQLIAHDKEV+D+AF+R K++FASVGADGSVRMFDLRSLEHSTIIYET DLTPL+RL+WNKQDPNY+ATI+ DS+K V+LDIR
Sbjct:   46 VHIVQKGESGFNKIGEFAQTYPPTKLMWNPAKGAGTKDLIATSADNLQLWEVSDAAPNGVQLHAQLAQKGDDKGGGAQEYCSPLTSFDWSEADPNIIGTSSIDTTCTIWDVTVGVPRTQLIAHDKEVFDMAFSRDKEVFASVGADGSVRMFDLRSLEHSTIIYETPDLTPLLRLAWNKQDPNYVATIMVDSSKGVVLDIR 245
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13072.2329.1 vs. uniprot
Match: A0A7S2G9N6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G9N6_9STRA)

HSP 1 Score: 269 bits (688), Expect = 1.940e-87
Identity = 134/196 (68.37%), Postives = 166/196 (84.69%), Query Frame = 1 
Query:    1 VQIVQRT-ETSFV-RTGELEHPYPPTKIMWSPDKSLNSTDLLATTGDYLRLWSVDEQEPGGVKLHSLLNNNTNAEYCSPLTSFDWCDADPSTVGTSSIDTTCTIWDVATGTPKTQLIAHDKEVYDIAFARTKDIFASVGADGSVRMFDLRSLEHSTIIYETHDLTPLMRLSWNKQDPNYLATILTDSAKTVILDIR 582
            VQ+VQ+  ET  + + GE +HPYP TKIMWSP+++  +TDLLATTGDYLR+WSV+++    +K+  LLNNN   EYC+PLTSFDW +ADP+ +GTSSIDTTCTIWD+     KTQLIAHDKEVYDIAF++ K++FASVGADGSVR+FDLRSLEHSTIIYE+ +L PL+RL+WNKQDPNY+AT+LTDS +TVILDIR
Sbjct:   49 VQLVQQNAETGQLEKIGEFDHPYPATKIMWSPERNA-TTDLLATTGDYLRIWSVNDENELSLKV--LLNNNQKNEYCAPLTSFDWNEADPNIIGTSSIDTTCTIWDLEAQVAKTQLIAHDKEVYDIAFSQGKNVFASVGADGSVRLFDLRSLEHSTIIYESENLHPLLRLAWNKQDPNYIATVLTDSPRTVILDIR 241
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BLAST of mRNA_E-fasciculatus_F_contig13072.2329.1 vs. uniprot
Match: B7G4D5_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G4D5_PHATC)

HSP 1 Score: 269 bits (688), Expect = 3.200e-87
Identity = 130/189 (68.78%), Postives = 154/189 (81.48%), Query Frame = 1 
Query:   28 SFVRTGELEHPYPPTKIMWSPDKSLNSTDLLATTGDYLRLWSVDEQEPGG----VKLHSLLNNNTNAEYCSPLTSFDWCDADPSTVGTSSIDTTCTIWDVATGTPKTQLIAHDKEVYDIAFARTKDIFASVGADGSVRMFDLRSLEHSTIIYETHDLTPLMRLSWNKQDPNYLATILTDSAKTVILDIR 582
            S  + G  +HPYP TKI+WSPD+SL + DLLATTGDYLR+W++ +   G      K   LLNNN  +EYC+PLTSFDW +ADP+ VGTSSIDTTCTIWD+ T T +TQLIAHD+EV+D+AFAR KD+FASVGADGSVRMFDLRSLEHSTIIYE+ +L PL+RL WNKQDPNYLAT + DS +TVILDIR
Sbjct:   68 SLYQAGSFDHPYPCTKILWSPDQSLAAPDLLATTGDYLRVWNIRDDGSGQGTVQCKKECLLNNNKTSEYCAPLTSFDWNEADPNIVGTSSIDTTCTIWDIETQTARTQLIAHDREVFDLAFARGKDVFASVGADGSVRMFDLRSLEHSTIIYESPNLDPLLRLEWNKQDPNYLATFMVDSRRTVILDIR 256
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13072.2329.1 vs. uniprot
Match: A0A7R9U5K9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5K9_9STRA)

HSP 1 Score: 268 bits (686), Expect = 3.900e-87
Identity = 126/192 (65.62%), Postives = 153/192 (79.69%), Query Frame = 1 
Query:    7 IVQRTETSFVRTGELEHPYPPTKIMWSPDKSLNSTDLLATTGDYLRLWSVDEQEPGGVKLHSLLNNNTNAEYCSPLTSFDWCDADPSTVGTSSIDTTCTIWDVATGTPKTQLIAHDKEVYDIAFARTKDIFASVGADGSVRMFDLRSLEHSTIIYETHDLTPLMRLSWNKQDPNYLATILTDSAKTVILDIR 582
            I Q T   F   G+ +HPYP TK+ W PD   +  DLLATTGDYLRLW+V E  P GV + +LLNN  + EYC+PLTSFDW +ADP+ +GTSSIDTTCTIWD+      TQLIAHDKEVYDIAF+R++D+FASVGADGSVR FD+RSLEHSTI++E+ DLTPL+R++WNKQDPNY+AT + DS KT+ILDIR
Sbjct:   51 IQQDTNGDFHDIGQFDHPYPATKVQWCPDGQSSDKDLLATTGDYLRLWNVSESSPNGVSMEALLNNKIS-EYCAPLTSFDWNEADPNLIGTSSIDTTCTIWDIVKQQAVTQLIAHDKEVYDIAFSRSRDLFASVGADGSVRYFDMRSLEHSTILFESRDLTPLLRVAWNKQDPNYIATFMADSNKTIILDIR 241
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13072.2329.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KWX9_9PHAE2.190e-13699.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LR84_ECTSI1.710e-134100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6V1NZ18_HETAK7.960e-9370.92Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
F0Y4A6_AURAN9.680e-9070.26Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S2Y0K5_9STRA1.080e-8870.20Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1FP62_9STRA3.880e-8866.67Hypothetical protein (Fragment) n=2 Tax=Corethron ... [more]
A0A835ZHY0_9STRA3.970e-8865.00WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A7S2G9N6_9STRA1.940e-8768.37Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
B7G4D5_PHATC3.200e-8768.78Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7R9U5K9_9STRA3.900e-8765.63Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13072contigE-fasciculatus_F_contig13072:971..3533 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score394.8
Seed ortholog evalue2.4e-107
Seed eggNOG ortholog2880.D8LR84
Preferred nameDCAF7
KEGG koko:K11805
GOsGO:0000151,GO:0001558,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006275,GO:0006464,GO:0006807,GO:0006950,GO:0006970,GO:0007275,GO:0007346,GO:0007399,GO:0007517,GO:0008150,GO:0008152,GO:0008361,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009966,GO:0009968,GO:0009987,GO:0010556,GO:0010564,GO:0010646,GO:0010648,GO:0010769,GO:0010975,GO:0016043,GO:0016363,GO:0016604,GO:0017016,GO:0017048,GO:0019219,GO:0019222,GO:0019538,GO:0019899,GO:0019904,GO:0022008,GO:0022603,GO:0022604,GO:0023051,GO:0023057,GO:0030100,GO:0030154,GO:0030274,GO:0030334,GO:0030336,GO:0030516,GO:0031267,GO:0031323,GO:0031326,GO:0031344,GO:0031461,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032535,GO:0032879,GO:0032991,GO:0033262,GO:0034399,GO:0035330,GO:0035331,GO:0036211,GO:0040008,GO:0040012,GO:0040013,GO:0042692,GO:0043087,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045445,GO:0045595,GO:0045664,GO:0045806,GO:0045927,GO:0048365,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0048627,GO:0048638,GO:0048699,GO:0048731,GO:0048747,GO:0048856,GO:0048869,GO:0050764,GO:0050765,GO:0050767,GO:0050770,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051020,GO:0051049,GO:0051051,GO:0051052,GO:0051128,GO:0051129,GO:0051146,GO:0051171,GO:0051239,GO:0051270,GO:0051271,GO:0051336,GO:0051726,GO:0051960,GO:0055001,GO:0055002,GO:0060099,GO:0060101,GO:0060255,GO:0060284,GO:0060627,GO:0061061,GO:0061387,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0071704,GO:0071840,GO:0080008,GO:0080090,GO:0090066,GO:0090329,GO:0120035,GO:1901564,GO:1902494,GO:1902531,GO:1902532,GO:1903463,GO:1905153,GO:1905154,GO:1990234,GO:2000026,GO:2000112,GO:2000145,GO:2000146
EggNOG free text desc.epidermal cell fate specification
EggNOG OGsKOG0290@1,KOG0290@2759
COG Functional cat.M
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04121
Hectar predicted targeting categoryother localisation
Exons5
Model size600
Cds size600
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13072.2329.1prot_E-fasciculatus_F_contig13072.2329.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig13072 971..3533 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927812.2186632-CDS-E-fasciculatus_F_contig13072:970..11001622927812.2186632-CDS-E-fasciculatus_F_contig13072:970..1100Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13072 971..1100 +
1695995704.9730065-CDS-E-fasciculatus_F_contig13072:970..11001695995704.9730065-CDS-E-fasciculatus_F_contig13072:970..1100Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13072 971..1100 +
1622927812.2296374-CDS-E-fasciculatus_F_contig13072:1460..15341622927812.2296374-CDS-E-fasciculatus_F_contig13072:1460..1534Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13072 1461..1534 +
1695995704.9835484-CDS-E-fasciculatus_F_contig13072:1460..15341695995704.9835484-CDS-E-fasciculatus_F_contig13072:1460..1534Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13072 1461..1534 +
1622927812.2459865-CDS-E-fasciculatus_F_contig13072:2193..23071622927812.2459865-CDS-E-fasciculatus_F_contig13072:2193..2307Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13072 2194..2307 +
1695995704.9919176-CDS-E-fasciculatus_F_contig13072:2193..23071695995704.9919176-CDS-E-fasciculatus_F_contig13072:2193..2307Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13072 2194..2307 +
1622927812.2617702-CDS-E-fasciculatus_F_contig13072:2803..28681622927812.2617702-CDS-E-fasciculatus_F_contig13072:2803..2868Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13072 2804..2868 +
1695995705.0000288-CDS-E-fasciculatus_F_contig13072:2803..28681695995705.0000288-CDS-E-fasciculatus_F_contig13072:2803..2868Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13072 2804..2868 +
1622927812.277206-CDS-E-fasciculatus_F_contig13072:3316..35331622927812.277206-CDS-E-fasciculatus_F_contig13072:3316..3533Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13072 3317..3533 +
1695995705.0086284-CDS-E-fasciculatus_F_contig13072:3316..35331695995705.0086284-CDS-E-fasciculatus_F_contig13072:3316..3533Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13072 3317..3533 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig13072.2329.1

>prot_E-fasciculatus_F_contig13072.2329.1 ID=prot_E-fasciculatus_F_contig13072.2329.1|Name=mRNA_E-fasciculatus_F_contig13072.2329.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=200bp
VQIVQRTETSFVRTGELEHPYPPTKIMWSPDKSLNSTDLLATTGDYLRLW
SVDEQEPGGVKLHSLLNNNTNAEYCSPLTSFDWCDADPSTVGTSSIDTTC
TIWDVATGTPKTQLIAHDKEVYDIAFARTKDIFASVGADGSVRMFDLRSL
EHSTIIYETHDLTPLMRLSWNKQDPNYLATILTDSAKTVILDIRYKVDG*
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mRNA from alignment at E-fasciculatus_F_contig13072:971..3533+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig13072.2329.1 ID=mRNA_E-fasciculatus_F_contig13072.2329.1|Name=mRNA_E-fasciculatus_F_contig13072.2329.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2563bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13072:971..3533+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GTGCAGATCGTGCAGCGTACGGAGACGTCGTTCGTGCGCACGGGGGAGCT
GGAGCACCCCTACCCGCCGACTAAGATCATGTGGTCTCCAGACAAGTCGC
TCAACAGCACGGACCTCCTCGCAACGACCGGTGCGTTGCAACAATCAGTG
CCCGTTGTTGTTGCTGCCGCTAGTACTACGTGTGTAATAGCTGTGTTTTG
CTTCACTGCTGTAGACTTGAGATATCGCCCTACAGGGAGCTCTCAGAGTT
GCCCCACGACAGGCAGTATGGTATTTTTTGAGGCGGTGTGATGTTGTACA
CTTCTTTTTGAACACTGGAATCATGTTACATGTGTCGTGTTGTGGTAGCA
TAGCCGAGGGCATTATTGGCTGCGTTGCCGCGTGGCGATTCGGGGTGTAC
TCAGTACCATAGCATCAGGTTTGATAGCCGACCGACCCTCTCCGTTCTTT
ATCCCGCGCCTCCGTTTTTCTGCGATTTCTGCGAAACCAGGGGACTACTT
GCGATTGTGGAGCGTGGATGAGCAGGAGCCAGGCGGGGTAAAGCTACACT
CCCTTCTCAATAATGTGAACCTTGTGCAGCCTTTGGGGGTGCTCTGTGTT
ATGGCCTTGCATCACAATGAATCTGGCAAACCATCGATAGATCATTGTTG
TGCAGTAATGTGGTCTTTGCGCATGAAGAATCCAGGTGGGCAGGTATATC
TGTGTCCAGTTTCGGTTGAAGTCGGTCGATCATGTTTACCCGCGCTGCTG
TCGCCTGATCCCGAGTTGTGTAGGTTTCGATGTCGATGTTGACGTTGGTT
TCGGTGTGGGTGTTGATGTCGTTGTCAGGTTAGCGTTTATGCCGATGTGG
GTCTTATGTTGGTTTAATTCAGGTGGTTGTGTTAGCGTTTGTGCAAGTGT
CCACGTATGGGCGTTGTTGTTTGCTGCTACAATTCAGACTACGTTATTGT
AGCTACTCTTTCTACCAGTGCAAACACTGCTGTGCTACAATACCGCTGAA
CTGCACTTGCACCAACACGCATGCCATCATCACACTCGGAGCGTAGAAAT
ATACCCTTGTTGTTCCCCTTAGTGGCTTTCTCGCCCGGCATGCTTCTTGG
ATTGACGAGACACACTATTCCTCTCCTCACGTTTGATCCCCGGTGGCTGC
ATCTGCCTCGCGAACGCCTCCTTGTTTTTCGTGCGACGGTGACGGTTTCA
CGGTTCCACGCTGACGGTTTCAGAACACGAACGCGGAGTACTGCTCGCCG
CTAACGTCATTCGACTGGTGTGACGCTGACCCGTCCACCGTGGGAACATC
GAGCATTGATACTACGTGCACGATCTGGGATGTGGCGGTGGGTTTGTTGG
TGCTGTTGTTGGTGCTGCCTTAGTCGCCGTTGTTGTTGTCGTCGTCGTTG
TTGATGACGTTGTTGTTGTTGTTGTTGTCGTTGCTGGTTACTGGTCTCAA
GGCACTTGAAGACGCTCTCTCTCTGTCGCGTACTGTTGCATGACGTAGCT
GCGGGTGTCTCCACATCTCAAATACTTTTTTCTGGGAAGGCATCGCGTAC
CTAAAAGTCGAGTGTCGCATGATGGGCTGAGGTGCTCGTCACTACCCAAG
ACCATATCCTCTATCATGTCGGTGCGAAAACCGCGTCTTTTCCCCATATC
TCATTTCATAGTACCGTGATCGTGACCGCTTCTTGTCTCTGGGTCAATTG
TCGGTTGCTAATTGCCGCTGCCCATCCACCTACTGCCCCCTCTGCGTTGC
TGCGCGTGCTGTGTGCTGCGCGTGCTGTGTGCTGCGCGTGCTGTGTGCTG
CGCGTGTTGCCGATGCTGGTGCTACCCGCTCAGACCGGTACACCAAAGAC
GCAACTAATTGCTCACGATAAAGAAGTGTACGACATCGCATTCGCCAGGT
ACACTTGTGTGGCAAGCCTGAACTAGCTCTGTCCTGTTGTTGTTGTTGTT
GTGGCCATGGTTTGCTGCTTTTGATGCCCCCGTATGTTGATCCTGCTGTA
CCTAACTGTTGCTGCTGTTGTTGTCCTTGCCATTGTCATAGGTAGTTGTG
TTGATACGTTGATACTACACCTGACTCAATCGGGTTGCTGCTGCTGTTGT
TGCCGTTGTCAAGAGTAGTTGTGTTGATGCTGTACCTGCTGCTGCTGCTG
CTGCTGCTGCCGCTGCTGTTATTGTTTGTCGTTGTCATGAGTAAGTTGCG
TTGATACGTTCATACTGCTCCTGGCTCAATCGAATTGCTGGTGTTGTCCT
TGCCCTCGCCATTGGCCACGAGCAGTTGTGTTGATACTGCTGTACCTAAC
TCAATCGGGTTGCTGTTTTTGTCCTTGCCGTTGCTGTCGTGAACAGGACG
AAGGACATCTTCGCCTCGGTGGGTGCCGACGGCAGCGTTCGAATGTTCGA
CCTCCGATCACTGGAGCACTCGACCATCATCTACGAGACACACGACCTGA
CGCCCCTCATGCGACTTAGCTGGAACAAGCAGGACCCCAACTACCTCGCA
ACGATTCTCACCGATTCCGCCAAGACGGTTATCCTGGACATCAGGTACAA
AGTAGACGGCTAG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13072:971..3533+

>mRNA_E-fasciculatus_F_contig13072.2329.1 ID=mRNA_E-fasciculatus_F_contig13072.2329.1|Name=mRNA_E-fasciculatus_F_contig13072.2329.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1200bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13072:971..3533+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GTGCAGATCGTGCAGCGTACGGAGACGTCGTTCGTGCGCACGGGGGAGCT
GGAGCACCCCTACCCGCCGACTAAGATCATGTGGTCTCCAGACAAGTCGC
TCAACAGCACGGACCTCCTCGCAACGACCGGTGCAGATCGTGCAGCGTAC
GGAGACGTCGTTCGTGCGCACGGGGGAGCTGGAGCACCCCTACCCGCCGA
CTAAGATCATGTGGTCTCCAGACAAGTCGCTCAACAGCACGGACCTCCTC
GCAACGACCGGGGACTACTTGCGATTGTGGAGCGTGGATGAGCAGGAGCC
AGGCGGGGTAAAGCTACACTCCCTTCTCAATAATGGGACTACTTGCGATT
GTGGAGCGTGGATGAGCAGGAGCCAGGCGGGGTAAAGCTACACTCCCTTC
TCAATAATAACACGAACGCGGAGTACTGCTCGCCGCTAACGTCATTCGAC
TGGTGTGACGCTGACCCGTCCACCGTGGGAACATCGAGCATTGATACTAC
GTGCACGATCTGGGATGTGGCGAACACGAACGCGGAGTACTGCTCGCCGC
TAACGTCATTCGACTGGTGTGACGCTGACCCGTCCACCGTGGGAACATCG
AGCATTGATACTACGTGCACGATCTGGGATGTGGCGACCGGTACACCAAA
GACGCAACTAATTGCTCACGATAAAGAAGTGTACGACATCGCATTCGCCA
GACCGGTACACCAAAGACGCAACTAATTGCTCACGATAAAGAAGTGTACG
ACATCGCATTCGCCAGGACGAAGGACATCTTCGCCTCGGTGGGTGCCGAC
GGCAGCGTTCGAATGTTCGACCTCCGATCACTGGAGCACTCGACCATCAT
CTACGAGACACACGACCTGACGCCCCTCATGCGACTTAGCTGGAACAAGC
AGGACCCCAACTACCTCGCAACGATTCTCACCGATTCCGCCAAGACGGTT
ATCCTGGACATCAGGTACAAAGTAGACGGCTAGGACGAAGGACATCTTCG
CCTCGGTGGGTGCCGACGGCAGCGTTCGAATGTTCGACCTCCGATCACTG
GAGCACTCGACCATCATCTACGAGACACACGACCTGACGCCCCTCATGCG
ACTTAGCTGGAACAAGCAGGACCCCAACTACCTCGCAACGATTCTCACCG
ATTCCGCCAAGACGGTTATCCTGGACATCAGGTACAAAGTAGACGGCTAG
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