mRNA_E-fasciculatus_F_contig13071.2328.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig13071.2328.1
Unique NamemRNA_E-fasciculatus_F_contig13071.2328.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig13071.2328.1 vs. uniprot
Match: D8LF61_ECTSI (Importin N-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF61_ECTSI)

HSP 1 Score: 424 bits (1090), Expect = 2.920e-141
Identity = 211/213 (99.06%), Postives = 212/213 (99.53%), Query Frame = 1
Query:   10 KVSAGKHHDIVATTCIKFLTLVVGKQIHKDLFGSEATLTEIIQKIAIPNIKMRAADEELFEFNPDDYISGDMDGGDNETRRRGACDLLRSMCKHYEEPTTRICSVFVTGMYQEYSVNREANWRSKDAALQLVLALSVRAQSQAGGVSKTNAYMNVLDAFTTHVLPEIQDPDVNARPIVRADCLKFVHTFRNQFSVEQLLALMPMLIAHLKSEH 648
            KVSAGKHHDIVATTCIKFLTLVVGKQIHKDLFGSEATLTEIIQKIAIPNI MRAADEELFEFNPDDYISGDMDGGDNETRRRGACDLLRSMCKHYEEPTTRICSVFVTGMYQEYSVNREANWRSKDAALQLVLALSVRAQSQAGGVSKTNAYMNVLDAFTTHVLPEIQDPDVNARPIVRADC+KFVHTFRNQFSVEQLLALMPMLIAHLKSEH
Sbjct:  282 KVSAGKHHDIVATTCIKFLTLVVGKQIHKDLFGSEATLTEIIQKIAIPNITMRAADEELFEFNPDDYISGDMDGGDNETRRRGACDLLRSMCKHYEEPTTRICSVFVTGMYQEYSVNREANWRSKDAALQLVLALSVRAQSQAGGVSKTNAYMNVLDAFTTHVLPEIQDPDVNARPIVRADCIKFVHTFRNQFSVEQLLALMPMLIAHLKSEH 494          
BLAST of mRNA_E-fasciculatus_F_contig13071.2328.1 vs. uniprot
Match: A0A6H5L714_9PHAE (Importin N-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L714_9PHAE)

HSP 1 Score: 258 bits (660), Expect = 3.300e-81
Identity = 126/128 (98.44%), Postives = 126/128 (98.44%), Query Frame = 1
Query:   10 KVSAGKHHDIVATTCIKFLTLVVGKQIHKDLFGSEATLTEIIQKIAIPNIKMRAADEELFEFNPDDYISGDMDGGDNETRRRGACDLLRSMCKHYEEPTTRICSVFVTGMYQEYSVNREANWRSKDAA 393
            KVSAGKHHDIVATTCIKFLTLVVGKQIHKDLFGSEATLTEIIQKIAIPNI MRAADEELFEFNPDDYISGDM GGDNETRRRGACDLLRSMCKHYEEPTTRICSVFVTGMYQEYSVNREANWRSKDAA
Sbjct:  317 KVSAGKHHDIVATTCIKFLTLVVGKQIHKDLFGSEATLTEIIQKIAIPNITMRAADEELFEFNPDDYISGDMGGGDNETRRRGACDLLRSMCKHYEEPTTRICSVFVTGMYQEYSVNREANWRSKDAA 444          
BLAST of mRNA_E-fasciculatus_F_contig13071.2328.1 vs. uniprot
Match: A0A835YZE8_9STRA (Cse1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZE8_9STRA)

HSP 1 Score: 259 bits (662), Expect = 4.190e-77
Identity = 126/227 (55.51%), Postives = 165/227 (72.69%), Query Frame = 1
Query:   10 KVSAGKHHDIVATTCIKFLTLVVGKQIHKDLFGSEATLTEIIQKIAIPNIKMRAADEELFEFNPDDYISGDMDGGDNETRRRGACDLLRSMCKHYEEPTTRICSVFVTGMYQEYSVNREANWRSKDAALQLVLALSVRAQSQAGGVSKTNAYMNVLDAFTTHVLPEIQDPDVNARPIVRADCLKFVHTFRNQFSVEQLLALMPMLIAHLKSEHVSESPFSRRVLDSL 690
            KV   + HD +ATTCI+FLT +V KQ+H  LF  EATL +I + I +PN+ +R +DEELFE NP DYI  DM+G D++TRRR +CDL+R MC+H+E  TTRICS     +   Y+ +    WR KDAALQL+LA+SVRA S A GVS+TN Y+NV++ F++ VLPEI  PDVN RPIV ADC+KFV TFRNQF+VEQ+ AL+PML+AHL SE    + ++   ++ L
Sbjct:  278 KVGPEQRHDALATTCIRFLTSIVSKQMHSALFAEEATLRQITENIVVPNLGLRDSDEELFEDNPSDYIQRDMEGSDSDTRRRVSCDLVRGMCRHHEAATTRICSELAGTLLARYASDPAQQWRCKDAALQLLLAVSVRAASAAHGVSETNQYVNVMEVFSSSVLPEISTPDVNTRPIVHADCIKFVATFRNQFTVEQMRALVPMLMAHLASEAAVVATYAAMAIEKL 504          
BLAST of mRNA_E-fasciculatus_F_contig13071.2328.1 vs. uniprot
Match: A0A7S3QDC2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QDC2_9STRA)

HSP 1 Score: 218 bits (554), Expect = 7.990e-62
Identity = 106/224 (47.32%), Postives = 158/224 (70.54%), Query Frame = 1
Query:   13 VSAGKHHDIVATTCIKFLTLVVGKQIHKDLFGSEATLTEIIQKIAIPNIKMRAADEELFEFNPDDYISGDMDGGDNETRRRGACDLLRSMCKHYEEPTTRICSVFVTGMYQEYSVNREANWRSKDAALQLVLALSVRAQSQAGGVSKTNAYMNVLDAFTTHVLPEIQDPDVNARPIVRADCLKFVHTFRNQFSVEQLLALMPMLIAHLKSEHVSESPFSRRVLD 684
            V+    HDI+ATTCIKFL+ +VGK +HK LF  E+TL +II  I IPN+K+R ADEE FE +P ++I GDM+G D+E+RR+ + DLL++MC+ +E  TT ICS  +  M  E+S+N   NW +KDAA+ L+L +S+RA+S  G VS  N  +N+++ F+ ++L E+QD + + RP+V+A  +K+  TFRNQF+ E + ALMP+LI+HL S +V    +S   ++
Sbjct:  316 VTTHSKHDILATTCIKFLSSLVGKPMHKSLFQDESTLKQIITNIVIPNLKIREADEERFEDDPQEFIMGDMEGSDSESRRKRSGDLLKAMCRQFEAQTTSICSEHIAAMLVEFSINPSDNWIAKDAAIHLMLGISIRAESNQG-VSSINDKVNIMEFFSANILTELQDLNHSIRPMVKAAAIKYASTFRNQFTKEHIAALMPLLISHLNSPNVVVHTYSASAVE 538          
BLAST of mRNA_E-fasciculatus_F_contig13071.2328.1 vs. uniprot
Match: B8LEN1_THAPS (Importin N-terminal domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LEN1_THAPS)

HSP 1 Score: 210 bits (535), Expect = 3.610e-59
Identity = 103/220 (46.82%), Postives = 153/220 (69.55%), Query Frame = 1
Query:   31 HDIVATTCIKFLTLVVGKQIHKDLFGSEATLTEIIQKIAIPNIKMRAADEELFEFNPDDYISGDMDGGDNETRRRGACDLLRSMCKHYEEPTTRICSVFVTGMYQEYSVNREANWRSKDAALQLVLALSVRAQSQAGGVSKTNAYMNVLDAFTTHVLPEIQDPDVNARPIVRADCLKFVHTFRNQFSVEQLLALMPMLIAHLKSEHVSESPFSRRVLDSL 690
            HD +AT  I+FL+ ++GK +H+ LF  E TL EI  KI IPN+ +R  DEE FE +P ++I  DM+  D E+RR+   +LLR+MC+ +E+ TT ICS  V+ M  +++ ++ + W+ KDAA+ L+L +S+RA+S   GVS+ N  +NV+D F+TH+L E+Q+ D+N RP+V+A  +KFV TFRNQFS EQ  ALMP+LIAHL S HV    ++   ++ +
Sbjct:  329 HDALATISIRFLSSLIGKLMHRKLFEGEGTLREIFGKIVIPNLMIREIDEERFEDDPQEFILSDMESSDTESRRKCTQELLRAMCRQFEQQTTAICSEHVSQMLGQFAADK-SQWKMKDAAIHLMLGISIRAESAQFGVSQVNEGVNVMDFFSTHILTELQETDMNVRPMVKATSIKFVSTFRNQFSKEQFGALMPLLIAHLGSTHVVLHTYAAAAIEKM 547          
BLAST of mRNA_E-fasciculatus_F_contig13071.2328.1 vs. uniprot
Match: A0A7S3XPQ4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPQ4_HETAK)

HSP 1 Score: 209 bits (531), Expect = 1.290e-58
Identity = 105/225 (46.67%), Postives = 150/225 (66.67%), Query Frame = 1
Query:   10 KVSAGKHHDIVATTCIKFLTLVVGKQIHKDLFGSEATLTEIIQKIAIPNIKMRAADEELFEFNPDDYISGDMDGGDNETRRRGACDLLRSMCKHYEEPTTRICSVFVTGMYQEYSVNREANWRSKDAALQLVLALSVRAQSQAGGVSKTNAYMNVLDAFTTHVLPEIQDPDVNARPIVRADCLKFVHTFRNQFSVEQLLALMPMLIAHLKSEHVSESPFSRRVLD 684
            +V+    +D +ATT I+FLT +V KQ+H++LF   A   +I+++IA+PN+ +R +D ELFE NP DYI  DM+G D +TRRR A +L+R +C+ + E  T +C  +   +  +Y+ NRE   R KDAAL L LA +V AQS   G S+ N  +NVL+ F+ HVLPE+QDPD NARPIVRADC+KFV  FR+Q  +  L  L+P+LIA L+S  V    ++   ++
Sbjct:  308 RVAQTPRYDPLATTAIRFLTAIVSKQLHRELFQDPAAQRQIVERIAVPNLMLRESDAELFEDNPQDYIQMDMEGSDQDTRRRCAVELVRGLCRTHREAATPLCREYAATLLAQYAQNREE--RLKDAALHLTLAAAVAAQSALHGASEVNPGVNVLEVFSQHVLPELQDPDPNARPIVRADCVKFVLLFRSQLDLNTLQGLLPLLIALLRSSSVVVQTYAANCIE 530          
BLAST of mRNA_E-fasciculatus_F_contig13071.2328.1 vs. uniprot
Match: A0A7S2UN57_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UN57_9STRA)

HSP 1 Score: 207 bits (528), Expect = 3.060e-58
Identity = 103/213 (48.36%), Postives = 150/213 (70.42%), Query Frame = 1
Query:   13 VSAGKHHDIVATTCIKFLTLVVGKQIHKDLFGSEATLTEIIQKIAIPNIKMRAADEELFEFNPDDYISGDMDGGDNETRRRGACDLLRSMCKHYEEPTTRICSVFVTGMYQEYSVNREANWRSKDAALQLVLALSVRAQSQAGGVSKTNAYMNVLDAFTTHVLPEIQDPDVNARPIVRADCLKFVHTFRNQFSVEQLLALMPMLIAHLKSEHV 651
            V++   HD +ATT IKFL  +V K +H+ LF SE TL  II KI +PN+ +R  DEE FE +P ++I GDM+GGD ++RRR +  LLR+MC+ +E  TT I    V GM  E++ +    W +KDAA+ L+L +S+RA+S+  GVS  N  +N+++ F+TH+LPE+Q+P+++ RP+++A  LKFV TFRNQF+ E L +LMP+LIAHL +  V
Sbjct:  307 VTSQPRHDELATTSIKFLAGLVEKLMHRKLFESEETLRNIILKIVVPNLMVREVDEERFEDDPSEFIMGDMEGGDTDSRRRCSQLLLRAMCRQFEVETTAITGEHVGGMLTEFTKDPANKWGAKDAAIHLMLGISIRAESEGKGVSIVNDKVNIMEFFSTHILPELQEPNMSVRPMLKATALKFVSTFRNQFTKEHLTSLMPLLIAHLSAPSV 519          
BLAST of mRNA_E-fasciculatus_F_contig13071.2328.1 vs. uniprot
Match: A0A7S0C261_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C261_9STRA)

HSP 1 Score: 192 bits (488), Expect = 4.760e-58
Identity = 95/203 (46.80%), Postives = 146/203 (71.92%), Query Frame = 1
Query:   13 VSAGKHHDIVATTCIKFLTLVVGKQIHKDLFGSEATLTEIIQKIAIPNIKMRAADEELFEFNPDDYISGDMDGGDNETRRRGACDLLRSMCKHYEEPTTRICSVFVTGMYQEYSVNREANWRSKDAALQLVLALSVRAQSQAGGVSKTNAYMNVLDAFTTHVLPEIQDPDVNARPIVRADCLKFVHTFRNQFSVEQLLALMPM 621
            V++ + HDI+ATT I+FL+ +V KQ+H+ LF  EATL +I+ KI IPN+ +R  D E FE +  D+I GDM+G D E+RR+ + +LLR+MC  ++  TT ICS  +T M  ++S +   +WR+KD A+ L+LA++++A+S A GVS TN  +NV++ F +H++PE+QD D ++RP+V+A  LKFV TFR QFS++ L  L+ +
Sbjct:   28 VTSYEKHDILATTSIRFLSSLVAKQMHRSLFQEEATLRQIVAKIIIPNVNVREVDVEKFEDDAPDFILGDMEGSDTESRRKCSQELLRAMCLQFDNETTAICSEHITSMLGQFSKDPVNSWRAKDVAIYLMLAVAIKAES-AMGVSLTNEKINVMEFFASHIVPELQDADHSSRPMVKATALKFVTTFRCQFSIDHLKVLIQL 229          
BLAST of mRNA_E-fasciculatus_F_contig13071.2328.1 vs. uniprot
Match: A0A4W4EB68_ELEEL (Exportin-2 n=1 Tax=Electrophorus electricus TaxID=8005 RepID=A0A4W4EB68_ELEEL)

HSP 1 Score: 199 bits (506), Expect = 4.750e-57
Identity = 91/220 (41.36%), Postives = 149/220 (67.73%), Query Frame = 1
Query:   31 HDIVATTCIKFLTLVVGKQIHKDLFGSEATLTEIIQKIAIPNIKMRAADEELFEFNPDDYISGDMDGGDNETRRRGACDLLRSMCKHYEEPTTRICSVFVTGMYQEYSVNREANWRSKDAALQLVLALSVRAQSQAGGVSKTNAYMNVLDAFTTHVLPEIQDPDVNARPIVRADCLKFVHTFRNQFSVEQLLALMPMLIAHLKSEHVSESPFSRRVLDSL 690
            +D++ +  I+FL  V  +  +K LF  + TLT I +K+ +PN++ R+ADEE FE N ++YI  D++G D +TRRR ACDL+R +C+ +E P T I S +V  M  EY+ N  ANW+ KD+A+ LV +L+ +AQ+Q  G+++ N  +N+ + F +H+LP+++ P VN  P+++AD +K+V TFR+Q   EQLL  +P+L+AHL++E   +  ++   L+ L
Sbjct:  298 YDLLVSNAIQFLASVCERPHYKHLFEDQNTLTSICEKVIVPNMEFRSADEEAFEDNSEEYIIRDLEGSDIDTRRRAACDLVRGLCRFFEGPVTAIFSGYVNSMLTEYAKNPAANWKHKDSAIYLVTSLASKAQTQKHGITQANELVNLTEFFVSHILPDLRSPSVNEFPVLKADAVKYVMTFRSQLPKEQLLETVPLLVAHLRAESTVQHTYTAHALERL 517          
BLAST of mRNA_E-fasciculatus_F_contig13071.2328.1 vs. uniprot
Match: K0R4M3_THAOC (Importin N-terminal domain-containing protein n=2 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R4M3_THAOC)

HSP 1 Score: 203 bits (517), Expect = 1.010e-56
Identity = 98/220 (44.55%), Postives = 150/220 (68.18%), Query Frame = 1
Query:   31 HDIVATTCIKFLTLVVGKQIHKDLFGSEATLTEIIQKIAIPNIKMRAADEELFEFNPDDYISGDMDGGDNETRRRGACDLLRSMCKHYEEPTTRICSVFVTGMYQEYSVNREANWRSKDAALQLVLALSVRAQSQAGGVSKTNAYMNVLDAFTTHVLPEIQDPDVNARPIVRADCLKFVHTFRNQFSVEQLLALMPMLIAHLKSEHVSESPFSRRVLDSL 690
            HD +AT  I+FL+ ++GK +H+ +F  EATL EI+ +I IPN+ +R  DEE FE +P ++I GDM+G D+E+RR+   ++LR+MC+ +E  TT I S  V  M Q+Y  +    W+ KD A+ L+L ++VRA+S   GVS+ N  +NV+D F+ HV  E+Q+ +++ RP+V+A C+KFV TFR QFS EQ++ LMP+LIAHL S  V    ++   ++ +
Sbjct:  315 HDALATISIRFLSSLIGKLMHRSIFQDEATLREILTRIVIPNLTIREVDEEKFEDDPAEFILGDMEGSDSESRRKCTQEMLRAMCRQFEGQTTAIVSEHVGSMLQQYQADPANQWKMKDVAVHLILGVAVRAESAQFGVSQVNDGVNVMDFFSKHVYSELQEANMSVRPMVKATCIKFVTTFRQQFSKEQIVGLMPLLIAHLGSGDVVVHTYAAAAIEKI 534          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13071.2328.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LF61_ECTSI2.920e-14199.06Importin N-terminal domain-containing protein n=1 ... [more]
A0A6H5L714_9PHAE3.300e-8198.44Importin N-terminal domain-containing protein n=1 ... [more]
A0A835YZE8_9STRA4.190e-7755.51Cse1-domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S3QDC2_9STRA7.990e-6247.32Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
B8LEN1_THAPS3.610e-5946.82Importin N-terminal domain-containing protein n=1 ... [more]
A0A7S3XPQ4_HETAK1.290e-5846.67Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2UN57_9STRA3.060e-5848.36Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S0C261_9STRA4.760e-5846.80Hypothetical protein (Fragment) n=1 Tax=Proboscia ... [more]
A0A4W4EB68_ELEEL4.750e-5741.36Exportin-2 n=1 Tax=Electrophorus electricus TaxID=... [more]
K0R4M3_THAOC1.010e-5644.55Importin N-terminal domain-containing protein n=2 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13071contigE-fasciculatus_F_contig13071:555..3414 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score423.7
Seed ortholog evalue5.5e-116
Seed eggNOG ortholog2880.D8LF61
Preferred nameCSE1L
KEGG koko:K18423
GOsGO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0005049,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005737,GO:0005829,GO:0005911,GO:0006606,GO:0006611,GO:0006810,GO:0006886,GO:0006913,GO:0006915,GO:0007589,GO:0008104,GO:0008150,GO:0008219,GO:0008283,GO:0009506,GO:0009987,GO:0012501,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0017038,GO:0017076,GO:0019001,GO:0030054,GO:0031224,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0033036,GO:0033365,GO:0034399,GO:0034504,GO:0034613,GO:0035639,GO:0036094,GO:0042886,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046903,GO:0046907,GO:0050878,GO:0051168,GO:0051169,GO:0051170,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055044,GO:0065007,GO:0065008,GO:0070013,GO:0070727,GO:0071702,GO:0071705,GO:0072594,GO:0097159,GO:0097367,GO:0140104,GO:0140142,GO:1901265,GO:1901363
EggNOG free text desc.nuclear export signal receptor activity
EggNOG OGsCOG5657@1,KOG1992@2759
Ec32 ortholog descriptionCAS/CSE, C-terminal
Ec32 orthologEc-06_001810.1
COG Functional cat.D
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Hectar predicted targeting categoryother localisation
Exons4
Model size690
Cds size690
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13071.2328.1prot_E-fasciculatus_F_contig13071.2328.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig13071 555..3414 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927812.158129-CDS-E-fasciculatus_F_contig13071:554..7461622927812.158129-CDS-E-fasciculatus_F_contig13071:554..746Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13071 555..746 +
1695995704.92612-CDS-E-fasciculatus_F_contig13071:554..7461695995704.92612-CDS-E-fasciculatus_F_contig13071:554..746Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13071 555..746 +
1622927812.1674562-CDS-E-fasciculatus_F_contig13071:1681..18821622927812.1674562-CDS-E-fasciculatus_F_contig13071:1681..1882Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13071 1682..1882 +
1695995704.9368842-CDS-E-fasciculatus_F_contig13071:1681..18821695995704.9368842-CDS-E-fasciculatus_F_contig13071:1681..1882Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13071 1682..1882 +
1622927812.17916-CDS-E-fasciculatus_F_contig13071:2624..27441622927812.17916-CDS-E-fasciculatus_F_contig13071:2624..2744Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13071 2625..2744 +
1695995704.9459155-CDS-E-fasciculatus_F_contig13071:2624..27441695995704.9459155-CDS-E-fasciculatus_F_contig13071:2624..2744Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13071 2625..2744 +
1622927812.1904838-CDS-E-fasciculatus_F_contig13071:3237..34141622927812.1904838-CDS-E-fasciculatus_F_contig13071:3237..3414Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13071 3238..3414 +
1695995704.9636223-CDS-E-fasciculatus_F_contig13071:3237..34141695995704.9636223-CDS-E-fasciculatus_F_contig13071:3237..3414Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13071 3238..3414 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig13071.2328.1

>prot_E-fasciculatus_F_contig13071.2328.1 ID=prot_E-fasciculatus_F_contig13071.2328.1|Name=mRNA_E-fasciculatus_F_contig13071.2328.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=230bp
VVSKVSAGKHHDIVATTCIKFLTLVVGKQIHKDLFGSEATLTEIIQKIAI
PNIKMRAADEELFEFNPDDYISGDMDGGDNETRRRGACDLLRSMCKHYEE
PTTRICSVFVTGMYQEYSVNREANWRSKDAALQLVLALSVRAQSQAGGVS
KTNAYMNVLDAFTTHVLPEIQDPDVNARPIVRADCLKFVHTFRNQFSVEQ
LLALMPMLIAHLKSEHVSESPFSRRVLDSL
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mRNA from alignment at E-fasciculatus_F_contig13071:555..3414+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig13071.2328.1 ID=mRNA_E-fasciculatus_F_contig13071.2328.1|Name=mRNA_E-fasciculatus_F_contig13071.2328.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2860bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13071:555..3414+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GTCGTGTCGAAGGTCTCTGCCGGCAAGCACCACGACATCGTGGCCACGAC GTGCATCAAGTTCCTGACGCTGGTAGTGGGCAAGCAGATACACAAGGACC TGTTCGGCTCGGAGGCCACGCTGACGGAGATCATCCAGAAGATCGCCATC CCCAATATCAAAATGCGGGCCGCCGACGAGGAGTTGTTCGAGGTATGCAT ACGTACCTACTTCCTGTGTCCGTGCCTGCCGCATCTTGTCCTTGCTTATG AATTTCAAGGCATCTGTGGTTCCATGATTTGTTCCGAATTTTGGATCCTT CCGGTCTTGTACATAGTCCTAATTTATTCGTACGTGCGTCAGCATGTGTG TTTTTGAGAAGCTGGTTCGTGGGTTTGGCGTTGCAGCGTGTGCTTTCAGA CGCTTACCCTACTGTTCGCCGCATGTGCGTTTTGAAAACGCGAACCCTGA TGGTTCTTCCCTTTGTAGCATGTGCGTCTTTGAAGCACTACGATGCCATG TGTGTTTTTAGAACGCTGATAAAGGCTTCATACTGATACGGACTCCATTC CATCTAACATTAACATCCGAAAGTGGTACCATGGTAGTGTAGAGAGTCCA TTTCCAAATGACTGCTCTGTCTCTCAACTTGGCGCCGTGAACCTTTTCGC CTCATGCTTCAATGACTCATTCGCTTTGTAAGTCTGCGCCTAGAGGGCAA GGGAAGAATGACACATGAAATATCCCAAATTTTTCTACCTTGAGCGCTAC TACTCGTAATGCATTTTGAACAACACCGTTTTTTCCCTCGCCAAACTCTG CCTATTAAACATAGACACATCCCGTCCATTTGGATTATTTTCTAACATTG TGAGAGTGGGGGCGCCAAGATATTGCCAGCTCTTCAACAGACAAGATATT GCCAGCTCTTCAACAGACACGGCGATGGAACGGGGGCACGGGGCAGGGGG GGGGGCGTACTGATATTTTTCGTGTCTTGGCGGTTAGACCATTGACCACG CGTCCTGAAGGGCGCGGGGCAGGGGTTTCCCTCCTGCCCTGCATACCGAC GGTCTTGGGCATGGAGCTAACCCACGCATTCACGATTCTTCCTTTCGTTT TTGCGGCTTTGCGGCCTGCCGCGTCAGTTCAACCCCGACGACTACATCTC CGGAGACATGGACGGCGGGGACAACGAGACGAGGCGGAGAGGCGCGTGCG ACCTCCTGAGGAGCATGTGCAAGCACTACGAGGAGCCCACCACCCGCATC TGCTCGGTGTTCGTGACGGGCATGTACCAGGAGTACAGCGTCAACCGAGA GGCCAACTGGCGGTCCAAGGATGCAGCGGTAGGATTCTGCCTCCCCCCCC CCTCTTCTGCTCTCTCTCTTTTTCGCTCTCTCTCTCTCTCTCTCTGTGTT CTTGAGTTGGCATCGACCTCGTTAAATGGCTGGCCGATGAAAGTACGTCG TCAGTCTCAGGGCGGCCATGCATAGCAACGCAAAACTTCCTGAAGGCCAT GCATGAACTAGGGCCCCGTTGGGGGGAGAGGGTCGCGGGGGAGTCTAGGC TGTCATTGTGTGGTTGTGTGTGGGAATTTGTTTGATTGCCACCTTCATTG TCACCGTCCTCCCTAACCGTGCGATATCGACAAAAAGCATGTGCGTGCTT CGTGTTATGTAAATAGTTAGATGATTCCATCCGACAACCCAAGATGTGCG CAATCCGCTGATGGGTAGAGCACCACGAGGTATTTATTTCTTTATACAGT AGCGATGTTTTGTGGAGGCAGGAAGGAGGCGCAGACGCTGCGGTGTGCAC TGCCCACGTTCGGGAGTCTCACGTTTGTCTTACGAGAACGGCCTTGCTGA TGTCTTACGAGGACAGCCATGCTGAAGCCAAGGTTTGGGTTGAGATGACC ATGTGGCGTGAAGAGAACACAGAGGTCCACCTGACACCTCTTTCCTACGC GGGAATCCTCATTTTGTTTCACCGATGGCGACCCCATATGAATTTTGAGA GCCGTCCCCCTATACTCCCCTCCCGAACGCGTGCATGTTGTTTTATTGTC CCGGTTCGTGCTGGCGGCAGTTACAACTCGTGCTGGCGCTCTCGGTGCGC GCCCAAAGCCAAGCTGGAGGGGTTTCTAAAACCAACGCGTACATGAACGT CCTCGACGCTTTCACGACGCACGTCTTGCCCGAGATACAGGTGTGTGGTC GAGGTTTTCCGTTGATCGTTTCTTTTTTGGGTAACACAACATCGACCATG GATATATAAAATGTTTTTGTATAAGGAATTAGTATCTGAGCACCTGTTCT TCCGGCCTAGTATTGCAGTTTTCGGTTTCTTCGAGCCTGAATATTCGGGT TCTTAGGTGGCGCGGTCGGTATGGCGTGCTCTCGTGAAGTGCCGGTGTAT TGGTGTTGGTGTTGGTCAATCTTGTCGACGTTTCCTCGAAAATCTCAAAA AAATCATGTACCGGCACCCGTGCAAGTCATGTGGGGTGGAAAGAGAGAGA AAATGGATCATTCCGCTCGCAGGCGATGTGTGAAGCGAGCGAGCTATCGT AGTGGTGTTGTGCGTTGCTTCCGAGCACGAGACAAAGCTTCTCTGACGAG TTAGACTGGTCGACGTCATCGTCATTAAGTGCTCCTTAAACACCCCTGTT CATGAGTAACGCCCCCCCCCACCCCCCCCTTAGGATCCCGACGTGAACGC GAGGCCCATTGTGCGGGCCGATTGCCTCAAGTTCGTCCACACCTTCCGGA ATCAGTTCTCCGTGGAACAGCTCCTAGCTCTCATGCCGATGCTCATCGCG CACCTCAAGTCGGAGCACGTGAGTGAGAGCCCCTTCAGTCGTCGAGTCCT CGACTCTCTT
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13071:555..3414+

>mRNA_E-fasciculatus_F_contig13071.2328.1 ID=mRNA_E-fasciculatus_F_contig13071.2328.1|Name=mRNA_E-fasciculatus_F_contig13071.2328.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1380bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13071:555..3414+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GTCGTGTCGAAGGTCTCTGCCGGCAAGCACCACGACATCGTGGCCACGAC
GTGCATCAAGTTCCTGACGCTGGTAGTGGGCAAGCAGATACACAAGGACC
TGTTCGGCTCGGAGGCCACGCTGACGGAGATCATCCAGAAGATCGCCATC
CCCAATATCAAAATGCGGGCCGCCGACGAGGAGTTGTTCGAGGTCGTGTC
GAAGGTCTCTGCCGGCAAGCACCACGACATCGTGGCCACGACGTGCATCA
AGTTCCTGACGCTGGTAGTGGGCAAGCAGATACACAAGGACCTGTTCGGC
TCGGAGGCCACGCTGACGGAGATCATCCAGAAGATCGCCATCCCCAATAT
CAAAATGCGGGCCGCCGACGAGGAGTTGTTCGAGTTCAACCCCGACGACT
ACATCTCCGGAGACATGGACGGCGGGGACAACGAGACGAGGCGGAGAGGC
GCGTGCGACCTCCTGAGGAGCATGTGCAAGCACTACGAGGAGCCCACCAC
CCGCATCTGCTCGGTGTTCGTGACGGGCATGTACCAGGAGTACAGCGTCA
ACCGAGAGGCCAACTGGCGGTCCAAGGATGCAGCGTTCAACCCCGACGAC
TACATCTCCGGAGACATGGACGGCGGGGACAACGAGACGAGGCGGAGAGG
CGCGTGCGACCTCCTGAGGAGCATGTGCAAGCACTACGAGGAGCCCACCA
CCCGCATCTGCTCGGTGTTCGTGACGGGCATGTACCAGGAGTACAGCGTC
AACCGAGAGGCCAACTGGCGGTCCAAGGATGCAGCGTTACAACTCGTGCT
GGCGCTCTCGGTGCGCGCCCAAAGCCAAGCTGGAGGGGTTTCTAAAACCA
ACGCGTACATGAACGTCCTCGACGCTTTCACGACGCACGTCTTGCCCGAG
ATACAGTTACAACTCGTGCTGGCGCTCTCGGTGCGCGCCCAAAGCCAAGC
TGGAGGGGTTTCTAAAACCAACGCGTACATGAACGTCCTCGACGCTTTCA
CGACGCACGTCTTGCCCGAGATACAGGATCCCGACGTGAACGCGAGGCCC
ATTGTGCGGGCCGATTGCCTCAAGTTCGTCCACACCTTCCGGAATCAGTT
CTCCGTGGAACAGCTCCTAGCTCTCATGCCGATGCTCATCGCGCACCTCA
AGTCGGAGCACGTGAGTGAGAGCCCCTTCAGTCGTCGAGTCCTCGACTCT
CTTGATCCCGACGTGAACGCGAGGCCCATTGTGCGGGCCGATTGCCTCAA
GTTCGTCCACACCTTCCGGAATCAGTTCTCCGTGGAACAGCTCCTAGCTC
TCATGCCGATGCTCATCGCGCACCTCAAGTCGGAGCACGTGAGTGAGAGC
CCCTTCAGTCGTCGAGTCCTCGACTCTCTT
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