mRNA_E-fasciculatus_F_contig1307.2326.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1307.2326.1 vs. uniprot
Match: D7G2D5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2D5_ECTSI) HSP 1 Score: 330 bits (845), Expect = 6.500e-107 Identity = 275/410 (67.07%), Postives = 307/410 (74.88%), Query Frame = 1
Query: 1 EVNLNHHQTRGRTAR-----KKAPAAKSKGKERARSTNRKKKAWPSSGTSRAYHQEPREEELEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS--SYTQDPDEVGSDDEESQDLLRPA-IAPMRTTLDVRVPRSAVGGG-VRQTDFARRNSTGGPGRGASSARGRSSSVGGRTGQPSLLAGRGYGRDGGAFGTSXXXXXXXXXXXXXXXXXXXXXXXXXXXDSGSASGGTANGRSSSGSSDRDGGGSTTSGAKRSVQARHNSEERHETGVGEVATFNSEMSGQDLFDALDAALVPKGALAELLGLLLRSISPDVANMLGERSTKKD-GPGEKSARGVCANVMAVFAYGFIGPSRLKFSTTGPIDHAHNPFMALGSHAWPGARQDLEKFPGDAGFPCCWCATPSFSNPV 1200
EVNLNHHQTRGRTA +K PAAKSKG+ R RS RKKKA ++ S A ++EP + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S SYT DPDE+GSDDEESQ+LLR + IAPMRTTLDVRVPRSA+GGG VR++DFARRNSTGGPGRGASSARGR SSVGGRTGQPSLLAGRG+ R G + XXXXXXXXXXXXXXXXXXXXXXXXXXX ST+ RH+ EE HETG+G V+T N EMSG++LFDALD ALVPK A LLGLLL+ ISPDVANMLG S+KK G EK+ARGV ANVM+V+AYGF+GP+R+KFS GP + NPF+ALGSHAWPGARQ+L FPGD GF CWC T FSNPV
Sbjct: 5 EVNLNHHQTRGRTASSRKPSQKTPAAKSKGEGRPRSATRKKKALHTTCPSTATYEEPPQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSDSSYTLDPDEIGSDDEESQNLLRSSNIAPMRTTLDVRVPRSAIGGGGVRRSDFARRNSTGGPGRGASSARGRPSSVGGRTGQPSLLAGRGHSRASGGGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTSE--------RHHREECHETGIGGVSTINMEMSGRNLFDALDTALVPKAAKTALLGLLLQLISPDVANMLGGESSKKTVGSDEKTARGVAANVMSVYAYGFVGPARMKFSGGGPTNALTNPFLALGSHAWPGARQNLNTFPGDPGFRSCWCTTLRFSNPV 406
BLAST of mRNA_E-fasciculatus_F_contig1307.2326.1 vs. uniprot
Match: A0A6H5JWT7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWT7_9PHAE) HSP 1 Score: 189 bits (481), Expect = 9.410e-54 Identity = 96/138 (69.57%), Postives = 110/138 (79.71%), Query Frame = 1
Query: 736 KRSVQARHNSEERHETGVGEVATFNSEMSGQDLFDALDAALVPKGALAELLGLLLRSISPDVANMLGERSTKKD--GPGEKSARGVCANVMAVFAYGFIGPSRLKFSTTGPIDHAHNPFMALGSHAWPGARQDLEKFP 1143
KRSVQ RHNSEE HETG+G +T N EMSGQ+LFD LD ALVPK A A LLGLLL+ ISPDVA MLG S+KK GPGEK+ARGV ANVM+V+AYGF+GP+R++FS GP NPF+ALGSHAWPGARQ+L FP
Sbjct: 68 KRSVQERHNSEECHETGIGRESTINMEMSGQNLFDTLDTALVPKAAKAALLGLLLQLISPDVATMLGGESSKKTTVGPGEKTARGVAANVMSVYAYGFVGPARMQFSGGGPTSALTNPFLALGSHAWPGARQNLNTFP 205
BLAST of mRNA_E-fasciculatus_F_contig1307.2326.1 vs. uniprot
Match: D7FUZ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUZ7_ECTSI) HSP 1 Score: 193 bits (491), Expect = 4.630e-53 Identity = 211/321 (65.73%), Postives = 234/321 (72.90%), Query Frame = 1
Query: 1 EVNLNHHQTRGRTAR-----KKAPAAKSKGKERARSTNRKKKAWPSSGTSRAYHQEPREEELEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS--SYTQDPDEVGSDDEESQDLLRPA-IAPMRTTLDVRVPRSAVGGG-VRQTDFARRNSTGGPGRGASSARGRSSSVGGRTGQPSLLAGRGYGRDGGAFGTSXXXXXXXXXXXXXXXXXXXXXXXXXXXDSGSASGGTANGRSSSGSSDRDGGGSTTSGAKRSVQARHNSEERHETGVGEVATFNSEMSGQDLFDALDAALVPKGALAELLGLLLRSISPDVANMLG 936
EVNLNHHQTRGRTA +K PAAKSKGK R RS RKKK ++ S A ++EP + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S SYT DPDE+GSDDEESQ+LLR + IAPMRTTLDVRVPRSA+GGG +R++DFARRNSTGGPGRGASSARGR SSVGGRTGQPSLLAGRG+ R G G SXXXXXXXXXXXXXXXXXXXXXXXXXXX +TSG + +TG+G V+T N EMSGQ+LFDALD ALVPK A A LLGLLL+ ISPDV++ G
Sbjct: 5 EVNLNHHQTRGRTASSRKPSQKTPAAKSKGKGRPRSATRKKKVLHTTCPSTATYEEPPQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSDSSYTLDPDEIGSDDEESQNLLRSSNIAPMRTTLDVRVPRSAIGGGGIRRSDFARRNSTGGPGRGASSARGRPSSVGGRTGQPSLLAGRGHSRASGG-GASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTSGRSAT-----------KTGIGGVSTINMEMSGQNLFDALDTALVPKAAKAALLGLLLQLISPDVSSRPG 313
BLAST of mRNA_E-fasciculatus_F_contig1307.2326.1 vs. uniprot
Match: A0A6H5K5R4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5R4_9PHAE) HSP 1 Score: 191 bits (486), Expect = 2.060e-52 Identity = 97/137 (70.80%), Postives = 112/137 (81.75%), Query Frame = 1
Query: 736 KRSVQARHNSEERHETGVGEVATFNSEMSGQDLFDALDAALVPKGALAELLGLLLRSISPDVANMLGERSTKKD-GPGEKSARGVCANVMAVFAYGFIGPSRLKFSTTGPIDHAHNPFMALGSHAWPGARQDLEKFP 1143
KRSVQ RHNSEE HETG+G +T N EMSGQ+LFDALD ALVPK A A LLGLLL+ ISPDVANMLG S+KK GPGEK+ARGV A VM+V+AYGF+GP+R++FS GP + NPF+ALGSHAWPGARQ+L FP
Sbjct: 133 KRSVQERHNSEECHETGIGRESTINMEMSGQNLFDALDTALVPKAAKAALLGLLLQLISPDVANMLGGESSKKTVGPGEKTARGVTAKVMSVYAYGFVGPARMQFSGGGPTNALTNPFLALGSHAWPGARQNLNTFP 269
BLAST of mRNA_E-fasciculatus_F_contig1307.2326.1 vs. uniprot
Match: A0A6H5K0W4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0W4_9PHAE) HSP 1 Score: 164 bits (416), Expect = 4.300e-45 Identity = 144/188 (76.60%), Postives = 158/188 (84.04%), Query Frame = 1
Query: 1 EVNLNHHQTRGRT--ARK---KAPAAKSKGKERARSTNRKKKAWPSSGTSRAYHQEPREEELEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS--SYTQDPDEVGSDDEESQDLLRPA-IAPMRTTLDVRVPRSAVGGG-VRQTDFARRNSTGGPGRGASSARGRSSSVGGRTGQPSLLAGRGYGR 537
EVNLNHHQTRGRT +RK K PAA+SKGK R RS RKKKA ++ S A ++EP + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S SYT DPDE+GSDDEESQ+LLRP+ IAPMRT LDVRVPRSA+GGG VR++DFARRNSTGGPGRGASSARGR SSVGGRTGQPSLLAGRG+ R
Sbjct: 5 EVNLNHHQTRGRTTSSRKPSQKTPAARSKGKGRPRSATRKKKALHTTCPSTATYEEPPQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSDSSYTLDPDEIGSDDEESQNLLRPSNIAPMRTILDVRVPRSAIGGGGVRRSDFARRNSTGGPGRGASSARGRPSSVGGRTGQPSLLAGRGHSR 192
BLAST of mRNA_E-fasciculatus_F_contig1307.2326.1 vs. uniprot
Match: D8LH35_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH35_ECTSI) HSP 1 Score: 155 bits (391), Expect = 8.950e-41 Identity = 78/111 (70.27%), Postives = 91/111 (81.98%), Query Frame = 1
Query: 814 EMSGQDLFDALDAALVPKGALAELLGLLLRSISPDVANMLGERSTKKD-GPGEKSARGVCANVMAVFAYGFIGPSRLKFSTTGPIDHAHNPFMALGSHAWPGARQDLEKFP 1143
EMSGQ+LFDALD ALVPK A A LLGLLL+ ISPDVANMLG S+KK GPGEK+ARGV ANVM+V+AYGF+GP+R++FS GP + NPF+ALG HAWP ARQ+L FP
Sbjct: 2 EMSGQNLFDALDTALVPKAAKAALLGLLLQLISPDVANMLGGESSKKTVGPGEKTARGVAANVMSVYAYGFVGPARMQFSGGGPTNALTNPFLALGPHAWPRARQNLNTFP 112
BLAST of mRNA_E-fasciculatus_F_contig1307.2326.1 vs. uniprot
Match: A0A6H5KR20_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR20_9PHAE) HSP 1 Score: 108 bits (269), Expect = 1.390e-22 Identity = 51/75 (68.00%), Postives = 61/75 (81.33%), Query Frame = 1
Query: 922 ANMLGERSTKKD-GPGEKSARGVCANVMAVFAYGFIGPSRLKFSTTGPIDHAHNPFMALGSHAWPGARQDLEKFP 1143
ANMLG S+KK GPGEK+ARGV ANVM+V+AYGF+GP+R++FS GP NPF+ALGSHAWPGARQ+L FP
Sbjct: 45 ANMLGGESSKKTVGPGEKTARGVAANVMSVYAYGFVGPARMQFSGGGPTSALTNPFLALGSHAWPGARQNLNTFP 119
BLAST of mRNA_E-fasciculatus_F_contig1307.2326.1 vs. uniprot
Match: A0A6H5KW98_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW98_9PHAE) HSP 1 Score: 89.7 bits (221), Expect = 2.010e-18 Identity = 47/62 (75.81%), Postives = 51/62 (82.26%), Query Frame = 1
Query: 736 KRSVQARHNSEERHETGVGEVATFNSEMSGQDLFDALDAALVPKGALAELLGLLLRSISPDV 921
KRSVQ RHNSEE HETG+G +T N EMSGQ+LFDALD ALVPK A A LLGLLL+ ISPDV
Sbjct: 33 KRSVQERHNSEECHETGIGGKSTINMEMSGQNLFDALDTALVPKAAKAALLGLLLQLISPDV 94
BLAST of mRNA_E-fasciculatus_F_contig1307.2326.1 vs. uniprot
Match: A0A6H5KNE2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNE2_9PHAE) HSP 1 Score: 75.9 bits (185), Expect = 3.040e-13 Identity = 39/62 (62.90%), Postives = 49/62 (79.03%), Query Frame = 1
Query: 922 ANMLGERSTKKD--GPGEKSARGVCANVMAVFAYGFIGPSRLKFSTTGPIDHA-HNPFMALG 1098
ANMLG S+KK GPGEK+ARGV ANVM+V+AYGF+GP+R++FS GP + NPF+ALG
Sbjct: 25 ANMLGGESSKKTAVGPGEKTARGVAANVMSVYAYGFVGPARMQFSGGGPANAPLTNPFLALG 86
BLAST of mRNA_E-fasciculatus_F_contig1307.2326.1 vs. uniprot
Match: A0A6H5KF69_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF69_9PHAE) HSP 1 Score: 64.7 bits (156), Expect = 5.440e-10 Identity = 31/46 (67.39%), Postives = 39/46 (84.78%), Query Frame = 1
Query: 928 MLGERSTKKD-GPGEKSARGVCANVMAVFAYGFIGPSRLKFSTTGP 1062
MLG S+KK GPGEK+ARGV ANVM+V+AYGF+GP+R++FS GP
Sbjct: 1 MLGGESSKKTVGPGEKTARGVAANVMSVYAYGFVGPARMQFSGGGP 46 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1307.2326.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1307.2326.1 >prot_E-fasciculatus_F_contig1307.2326.1 ID=prot_E-fasciculatus_F_contig1307.2326.1|Name=mRNA_E-fasciculatus_F_contig1307.2326.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=400bp EVNLNHHQTRGRTARKKAPAAKSKGKERARSTNRKKKAWPSSGTSRAYHQback to top mRNA from alignment at E-fasciculatus_F_contig1307:3163..7724- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1307.2326.1 ID=mRNA_E-fasciculatus_F_contig1307.2326.1|Name=mRNA_E-fasciculatus_F_contig1307.2326.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4562bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1307:3163..7724- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1307:3163..7724- >mRNA_E-fasciculatus_F_contig1307.2326.1 ID=mRNA_E-fasciculatus_F_contig1307.2326.1|Name=mRNA_E-fasciculatus_F_contig1307.2326.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2400bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1307:3163..7724- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |