mRNA_E-fasciculatus_F_contig1307.2325.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1307.2325.1
Unique NamemRNA_E-fasciculatus_F_contig1307.2325.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1307.2325.1 vs. uniprot
Match: A0A6H5KF40_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF40_9PHAE)

HSP 1 Score: 343 bits (880), Expect = 2.200e-116
Identity = 175/245 (71.43%), Postives = 205/245 (83.67%), Query Frame = 1 
Query:   16 FRLHCIPATAIFTRAVVSARSELHADIRSAIADFVIPIAEKEASINNPMTAADLLRGVRESLLDILPESQGLAGLFHRIMFRFLKAHQASSREPLSLEYLLGPERLHDDFLAQVTEGLLATPALLHAANDIAALPINEIGTHETIICKVTRKARAWSALKNGGYGSANARAFQESLWYNLFQFMTGPRRHTGKILTIPRSDFHKPEILRFLAPYFDDKDRIVVPETPAADVHVQDADLEEYLHEM 750
            F L    ATAIF +AVVSARSELHA+IRSAIA+ +IP+ E+EAS NNPMT ADLLRGV E ++D+ PES+ L GL  R+M+RF KA+QAS+R+ L+L YLLGPERL +DFL QV      TPALLHAANDIAALP+NEIGTHETI+CKVTRK+RAW  L  GG+GSA+ARAFQESLWYNLFQFMTGPRR T  ILTIP SDFHKPEI+RFLAPY+ +KD +VVPETPAADV+VQD DLE YL+++
Sbjct:    4 FVLSASTATAIFVKAVVSARSELHAEIRSAIAELLIPLMEEEASTNNPMTGADLLRGVCERIMDVDPESEELTGLMSRVMWRFTKAYQASTRKTLTLGYLLGPERLKEDFLGQVV-----TPALLHAANDIAALPVNEIGTHETIVCKVTRKSRAWIKLSAGGFGSADARAFQESLWYNLFQFMTGPRRCTAAILTIPSSDFHKPEIMRFLAPYYVEKDSLVVPETPAADVYVQDDDLEAYLNDI 243
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1307.2325.1 vs. uniprot
Match: A0A6H5K5R4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5R4_9PHAE)

HSP 1 Score: 344 bits (883), Expect = 9.080e-114
Identity = 174/236 (73.73%), Postives = 201/236 (85.17%), Query Frame = 1 
Query:   43 AIFTRAVVSARSELHADIRSAIADFVIPIAEKEASINNPMTAADLLRGVRESLLDILPESQGLAGLFHRIMFRFLKAHQASSREPLSLEYLLGPERLHDDFLAQVTEGLLATPALLHAANDIAALPINEIGTHETIICKVTRKARAWSALKNGGYGSANARAFQESLWYNLFQFMTGPRRHTGKILTIPRSDFHKPEILRFLAPYFDDKDRIVVPETPAADVHVQDADLEEYLHEM 750
            AI  +AVVSAR+ELHA+IR+AIA+F+IP+ E+EAS NNPMT ADLLRGVRE ++D+ PES+ L GL  RIM+RF KAHQAS+R+ L+L +LLGPERL DDFL QV      TPALLHAANDIAALP+NEIGTHETI+CKVTRK+RAW  L  GG+GSANARAFQESLWYNLFQFMTGPRR T  ILTIP SDFHKPEI+RFLAPYF +KD + VPETPAADV+VQD DLE YL++M
Sbjct:  270 AILVKAVVSARTELHAEIRNAIAEFLIPLMEEEASTNNPMTGADLLRGVRERIMDVDPESEELTGLMSRIMWRFTKAHQASTRKALTLGFLLGPERLKDDFLGQVV-----TPALLHAANDIAALPVNEIGTHETIVCKVTRKSRAWIKLSAGGFGSANARAFQESLWYNLFQFMTGPRRCTAAILTIPSSDFHKPEIMRFLAPYFVEKDSLDVPETPAADVYVQDDDLEAYLNDM 500
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1307.2325.1 vs. uniprot
Match: A0A6H5KR20_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR20_9PHAE)

HSP 1 Score: 311 bits (798), Expect = 1.150e-102
Identity = 158/217 (72.81%), Postives = 183/217 (84.33%), Query Frame = 1 
Query:   43 AIFTRAVVSARSELHADIRSAIADFVIPIAEKEASINNPMTAADLLRGVRESLLDILPESQGLAGLFHRIMFRFLKAHQASSREPLSLEYLLGPERLHDDFLAQVTEGLLATPALLHAANDIAALPINEIGTHETIICKVTRKARAWSALKNGGYGSANARAFQESLWYNLFQFMTGPRRHTGKILTIPRSDFHKPEILRFLAPYFDDKDRIVVPET 693
            AIF +AVVSARSELHA+IR+AIA+F+IP+ E+EAS NNPMT ADLLRGVRE ++D+ PES+ L GL  RIM+RF KAHQAS+R+ L+L YLLGPERL +DFL QV      TPALLHAANDIAALP+NEIGTHETI+CKV RK++AW  L  GG GSANARAFQESLWYNLFQFMTGPRR T  ILTIP SDFHKPEI+RFLA Y+ +K+ +VVPET
Sbjct:  120 AIFVKAVVSARSELHAEIRNAIAEFLIPLMEEEASTNNPMTGADLLRGVRERIMDVDPESEELTGLMFRIMWRFTKAHQASTRKVLTLGYLLGPERLKEDFLGQVV-----TPALLHAANDIAALPVNEIGTHETIVCKVIRKSKAWIKLSAGGIGSANARAFQESLWYNLFQFMTGPRRCTAAILTIPSSDFHKPEIMRFLARYYVEKNSLVVPET 331
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1307.2325.1 vs. uniprot
Match: D7FUZ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUZ7_ECTSI)

HSP 1 Score: 268 bits (686), Expect = 5.170e-84
Identity = 142/224 (63.39%), Postives = 168/224 (75.00%), Query Frame = 1 
Query:   79 ELHADIRSAIADFVIPIAEKEASINNPMTAADLLRGVRESLLDILPESQGLAGLFHRIMFRFLKAHQASSREPLSLEYLLGPERLHDDFLAQVTEGLLATPALLHAANDIAALPINEIGTHETIICKVTRKARAWSALKNGGYGSANARAFQESLWYNLFQFMTGPRRHTGKILTIPRSDFHKPEILRFLAPYFDDKDRIVVPETPAADVHVQDADLEEYLHEM 750
            ELHA+IR+AIA+F++P+ E+EAS NNPMT ADL RGVRE ++D+ PES  L GL  RIM+RF KAHQAS+R+ L+L YLLGPERL +DFL QV      TPALL AANDIAALP+NEIGTHETI+CKVTRK+RAW  L  GG+GSANA AFQES                        SDFHKPEI+RFLAPY+ +KD +VVPETPAADV+VQD DLE YL++M
Sbjct:  315 ELHAEIRNAIAEFLVPLMEEEASTNNPMTGADLFRGVRERIMDVDPESTELTGLMSRIMWRFTKAHQASTRKALTLGYLLGPERLKEDFLGQVV-----TPALLQAANDIAALPVNEIGTHETIVCKVTRKSRAWIKLSAGGFGSANAWAFQES------------------------SDFHKPEIMRFLAPYYVEKDSLVVPETPAADVYVQDDDLEAYLNDM 509
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1307.2325.1 vs. uniprot
Match: A0A6H5KEJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEJ3_9PHAE)

HSP 1 Score: 244 bits (622), Expect = 7.140e-76
Identity = 122/226 (53.98%), Postives = 156/226 (69.03%), Query Frame = 1 
Query:   40 TAIFTRAVVSARSELHADIRSAIADFVIPIAEKEASINNPMTAADLLRGVRESLLDILPESQGLAGLFHRIMFRFLKAHQASSREPLSLEYLLGPERLHDDFLAQVTEGLLATPALLHAANDIAALPINEIGTHETIICKVTRKARAWSALKNGGYGSANARAFQESLWYNLFQFMTGPRRHTGKILTIPRSDFHKPEILRFLAPYFDDKDRIVVPETPAADVHVQ 717
            TA+  +AVV+ARSELH D+R A+ DF+IP+ E+EA+ NNP TAADLLRGVRE + DI P ++ +  L HR+M+R+ KAH  S+RE LS   L+G +RLH+DFLAQ                         IGT E+++CK TRKARAW  L NGGY S NA+AFQE  WY++ QFMTGPRRH   ILTIP+SD+  P+I+RFL+P+   KD +VV ETPA DVHV+
Sbjct:  177 TAVIIKAVVAARSELHGDVRGALVDFLIPMIEEEAATNNPRTAADLLRGVREQVADIDPAAEAINTLLHRVMWRYTKAHMQSTREDLSEGQLVGEDRLHEDFLAQ-------------------------IGTLESVVCKCTRKARAWGRLSNGGYSSTNAKAFQEGFWYSMLQFMTGPRRHVSGILTIPKSDYGNPKIMRFLSPHAGGKDNLVVEETPAEDVHVE 377
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1307.2325.1 vs. uniprot
Match: D8LH35_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH35_ECTSI)

HSP 1 Score: 207 bits (526), Expect = 8.930e-63
Identity = 119/236 (50.42%), Postives = 143/236 (60.59%), Query Frame = 1 
Query:   43 AIFTRAVVSARSELHADIRSAIADFVIPIAEKEASINNPMTAADLLRGVRESLLDILPESQGLAGLFHRIMFRFLKAHQASSREPLSLEYLLGPERLHDDFLAQVTEGLLATPALLHAANDIAALPINEIGTHETIICKVTRKARAWSALKNGGYGSANARAFQESLWYNLFQFMTGPRRHTGKILTIPRSDFHKPEILRFLAPYFDDKDRIVVPETPAADVHVQDADLEEYLHEM 750
            AIF +AVVSARSELHA+IR+AIA+F+IP+ E+EAS NNPMT ADLLRGVRE ++D+ PES+ L GL  R M+RF KAHQAS+R+ ++L YLLGPERL +DFL Q                                                                     FMTGPRR T  ILTIP SDFHKPEI+RFLAPY+ +KD +VVPETPAADV+VQD DLE YL++M
Sbjct:  113 AIFVKAVVSARSELHAEIRNAIAEFLIPLMEEEASTNNPMTGADLLRGVRERIMDVDPESEELTGLMSRSMWRFTKAHQASTRKAITLGYLLGPERLKEDFLGQ---------------------------------------------------------------------FMTGPRRCTATILTIPSSDFHKPEIMRFLAPYYVEKDSLVVPETPAADVYVQDDDLEAYLNDM 279
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1307.2325.1 vs. uniprot
Match: A0A6H5K4A1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4A1_9PHAE)

HSP 1 Score: 199 bits (506), Expect = 4.390e-61
Identity = 102/195 (52.31%), Postives = 129/195 (66.15%), Query Frame = 1 
Query:  133 EKEASINNPMTAADLLRGVRESLLDILPESQGLAGLFHRIMFRFLKAHQASSREPLSLEYLLGPERLHDDFLAQVTEGLLATPALLHAANDIAALPINEIGTHETIICKVTRKARAWSALKNGGYGSANARAFQESLWYNLFQFMTGPRRHTGKILTIPRSDFHKPEILRFLAPYFDDKDRIVVPETPAADVHVQ 717
            E+EA+ NNP TAADLLRGVRE + DI P ++ +  L HR+M+R+ KAH  S+RE LS   L+G +RLH+DFLAQ                         IGT E+++CK TRKARAW  L NGGY S NA+AFQE  WY++ QFMTGPRRH   ILTIP+SD+  P+I+RF + +   KD +VV ETPA DVHV+
Sbjct:    3 EEEAATNNPRTAADLLRGVREQVADIDPAAEAINTLLHRVMWRYTKAHMQSTREDLSEGQLVGEDRLHEDFLAQ-------------------------IGTLESVVCKCTRKARAWGRLSNGGYSSTNAKAFQEGFWYSMLQFMTGPRRHVSGILTIPKSDYGHPKIMRFQSLHTGCKDNLVVEETPADDVHVE 172
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1307.2325.1 vs. uniprot
Match: A0A6H5KHD1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHD1_9PHAE)

HSP 1 Score: 201 bits (511), Expect = 6.180e-61
Identity = 97/122 (79.51%), Postives = 108/122 (88.52%), Query Frame = 1 
Query:  367 LLATPALLHAANDIAALPINEIGTHETIICKVTRKARAWSALKNGGYGSANARAFQESLWYNLFQFMTGPRRHTGKILTIPRSDFHKPEILRFLAPYFDDKDRIVVPETPAADVHVQDADLE 732
            ++ TPALLHAANDIAALP+NEIGTHETI+CKVTRK+RAW  L  GG+GSANARA QESLWYNLFQFMTGPRR T  ILTIP SDFHKPEI+RFLAPY+ +KD +VVPET AADV+VQD DLE
Sbjct:  120 IVVTPALLHAANDIAALPVNEIGTHETIVCKVTRKSRAWIKLSAGGFGSANARAIQESLWYNLFQFMTGPRRCTAAILTIPSSDFHKPEIMRFLAPYYVEKDSLVVPETLAADVYVQDDDLE 241
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1307.2325.1 vs. uniprot
Match: A0A6H5KKM5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKM5_9PHAE)

HSP 1 Score: 192 bits (489), Expect = 1.040e-57
Identity = 101/166 (60.84%), Postives = 114/166 (68.67%), Query Frame = 1 
Query:  370 LATPALLHAANDIAALPINEIGTHETIICKVTRKARAWSALKNGGYGSANARAFQE---------------------------------------SLWYNLFQFMTGPRRHTGKILTIPRSDFHKPEILRFLAPYFDDKDRIVVPETPAADVHVQDADLEEYLHEM 750
            + TPALLHAANDIAALP+NEIGTHETI+CKVTRK+RAW  L  GG+GSANARAFQE                                       SLWYNLFQFMTGPRR T  ILTIP SDFHKPEI+RFLAPY+ +KD +VVPETPAADV+VQD DLE YL+++
Sbjct:    8 VVTPALLHAANDIAALPVNEIGTHETIVCKVTRKSRAWIKLSAGGFGSANARAFQERLQLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLWYNLFQFMTGPRRCTAAILTIPSSDFHKPEIMRFLAPYYVEKDSLVVPETPAADVYVQDDDLEAYLNDI 173
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1307.2325.1 vs. uniprot
Match: A0A6H5KA09_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA09_9PHAE)

HSP 1 Score: 174 bits (440), Expect = 1.970e-50
Identity = 104/237 (43.88%), Postives = 136/237 (57.38%), Query Frame = 1 
Query:  133 EKEASINNPMTAADLLRGVRESLLDILPESQGLAGLFHRIM---FRFLKAHQASSREPLSLEYLLGPE---------------------------RLHDDFLAQVTEGLLATPALLHAANDIAALPINEIGTHETIICKVTRKARAWSALKNGGYGSANARAFQESLWYNLFQFMTGPRRHTGKILTIPRSDFHKPEILRFLAPYFDDKDRIVVPETPAADVHVQDADLEEYLHEMN 753
            ++EA+ NNP TAADLLRGVRE + DI P ++      H  M    R  +  Q ++ +   +   L                              RLH   +++     + TPALLHAA DIAALP+ EIG+ E+++CK TRKARAW+ L NGGY S NA+AFQE  WY++ QFMTGPRR    ILTIP+SD+  P+I+RFL+P+    D +VV ETPA      D+DL  YL EMN
Sbjct:    3 KEEAATNNPRTAADLLRGVREQVADIDPAAEVHMPEDHNFMPPHSRCKRKLQRAAGQCRDMNIYLTSSACTSMYESSDCIARNIRRKQQHGTRTARLH---VSRCMHSSVVTPALLHAAKDIAALPVAEIGSLESVVCKCTRKARAWARLSNGGYSSTNAKAFQEKFWYSMLQFMTGPRRIASGILTIPKSDYGNPKIMRFLSPHAGGNDNLVVEETPAEG---GDSDLGAYLDEMN 233
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1307.2325.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KF40_9PHAE2.200e-11671.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5R4_9PHAE9.080e-11473.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KR20_9PHAE1.150e-10272.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUZ7_ECTSI5.170e-8463.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KEJ3_9PHAE7.140e-7653.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LH35_ECTSI8.930e-6350.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K4A1_9PHAE4.390e-6152.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KHD1_9PHAE6.180e-6179.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KKM5_9PHAE1.040e-5760.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KA09_9PHAE1.970e-5043.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1307contigE-fasciculatus_F_contig1307:801..2840 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-06_011045.1
Exons4
Model size756
Cds size756
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1307.2325.1prot_E-fasciculatus_F_contig1307.2325.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1307 801..2840 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927811.5769336-CDS-E-fasciculatus_F_contig1307:800..10171622927811.5769336-CDS-E-fasciculatus_F_contig1307:800..1017Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1307 801..1017 -
1695995704.771207-CDS-E-fasciculatus_F_contig1307:800..10171695995704.771207-CDS-E-fasciculatus_F_contig1307:800..1017Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1307 801..1017 -
1622927811.590074-CDS-E-fasciculatus_F_contig1307:1913..20821622927811.590074-CDS-E-fasciculatus_F_contig1307:1913..2082Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1307 1914..2082 -
1695995704.7813222-CDS-E-fasciculatus_F_contig1307:1913..20821695995704.7813222-CDS-E-fasciculatus_F_contig1307:1913..2082Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1307 1914..2082 -
1622927811.6010818-CDS-E-fasciculatus_F_contig1307:2321..24661622927811.6010818-CDS-E-fasciculatus_F_contig1307:2321..2466Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1307 2322..2466 -
1695995704.7926712-CDS-E-fasciculatus_F_contig1307:2321..24661695995704.7926712-CDS-E-fasciculatus_F_contig1307:2321..2466Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1307 2322..2466 -
1622927811.6132426-CDS-E-fasciculatus_F_contig1307:2615..28401622927811.6132426-CDS-E-fasciculatus_F_contig1307:2615..2840Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1307 2616..2840 -
1695995704.8099809-CDS-E-fasciculatus_F_contig1307:2615..28401695995704.8099809-CDS-E-fasciculatus_F_contig1307:2615..2840Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1307 2616..2840 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1307.2325.1

>prot_E-fasciculatus_F_contig1307.2325.1 ID=prot_E-fasciculatus_F_contig1307.2325.1|Name=mRNA_E-fasciculatus_F_contig1307.2325.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=252bp
MTRVLFRLHCIPATAIFTRAVVSARSELHADIRSAIADFVIPIAEKEASI
NNPMTAADLLRGVRESLLDILPESQGLAGLFHRIMFRFLKAHQASSREPL
SLEYLLGPERLHDDFLAQVTEGLLATPALLHAANDIAALPINEIGTHETI
ICKVTRKARAWSALKNGGYGSANARAFQESLWYNLFQFMTGPRRHTGKIL
TIPRSDFHKPEILRFLAPYFDDKDRIVVPETPAADVHVQDADLEEYLHEM
N*
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mRNA from alignment at E-fasciculatus_F_contig1307:801..2840-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1307.2325.1 ID=mRNA_E-fasciculatus_F_contig1307.2325.1|Name=mRNA_E-fasciculatus_F_contig1307.2325.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2040bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1307:801..2840- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGACCCGTGTGCTGTTCCGTCTGCACTGCATCCCTGCCACAGCCATCTT
CACGAGGGCAGTCGTCTCGGCGCGCTCGGAACTCCACGCCGACATACGGA
GCGCCATCGCCGACTTCGTCATTCCTATCGCGGAAAAGGAGGCATCCATC
AACAACCCGATGACGGCCGCGGACCTCCTCCGTGGCGTCCGCGAGAGTCT
CCTAGATATCCTCCCGGAGTCGCAGGTAAACGTCTCAGCCAGGAACGAGC
CCAATTGGTGCATTCTGATCAACGTGCAACCCTCTTCAACGTCCCGTATC
CCGTACCCACGGAACCCCTCGTCCCTACTATTTGCTAATTCTTCCGGTGG
CTGATGTGAACTCGGCGTTTCCAGGGACTGGCTGGCCTCTTCCACCGCAT
CATGTTTCGCTTCCTGAAAGCGCACCAGGCTTCCTCCCGCGAACCACTCT
CGTTGGAGTACCTCCTGGGACCGGAGAGGCTGCACGACGACTTCCTCGCA
CAGGTGACGGAAGGGTTGCGTGCCCGTTTCATTTATTAACGCGCGGCAGG
CTGTCGAGCATCTGACCTGTAACCCGAATAGGTGATGGTATGCCAGTATA
AGAGCCGATATGTAGGCACCGGTAGAGCGAGCGAGAGCGGTAGTAGGTGA
AACGGTTTCCAATTGTGATTAGCGCATGTGTGACACTCCGTTTTTTATTT
TTAGCTTTTGATTCGTCTTTCCCCTCGTCCTCTTGATGACACTCTATTGC
ATATCAAGTTGCCACTCCCGCCTTGCTACATGCCGCGAACGACATCGCGG
CCCTGCCGATCAACGAGATTGGCACTCATGAGACGATCATCTGCAAGGTA
ACTCGCAAGGCGAGAGCCTGGTCTGCGCTGAAGAACGGCGGCTACGGTTC
CGCCAATGCCCGGGCTTTCCAAGAGAGGTAAGCGACCACGCCAAAGACAT
GGGTGTGGCAGTTAAACCCGCGTTCGAACGTACTTCGACGAGGTGGATAT
GGAGCCCAACGAGATTCCCTTGAGCGAACAAACCCGGTCACGGCAGCGTT
TAGCGGTCGACCGTTATTGTTACAGCTGAATGAGGGAGACATGGATGTAT
GAGTTCGTTTAAATTAATGAGTATGGGGTATGGTTTTAAGTCCTACGTAT
ATCGTTATCAAGCGCAGGACTTGGAAGTAAGGGTGGAGTGGATACACCGG
CCGTGGGACGTGATGCCACTGTTTGATCTCATACTTATCTGAGGAGAGGA
ACTGTCGTGAAAATACTGATGTATTATGTGCAACGGAGATGGAAAAAGAT
AAAATCGTTACCAGCGCTGTCACGCAATAAAGAGGCAATATTTGAGAGAG
TCAGATGCCCCCTCACTCTTCAACCACCAACCCTGCTCCCACCCACCCAC
CCAACGAGATCATTTTGTCAACATCCCCGCAACTTTTGAGTTTTCCACCA
CTTGTTGTGTCAAGGCGTCTTGATTCCATGTGCGACCGTTTTATTGCTCG
TTTGCGGTGATATCTTCACGCAGCTGGGTGTTGTCCGCCTCATAGACAAG
TTACCCGTTTTTGTGTATTCCAGGAGTTGAAAAGTAGGATACGTGTTCGT
CTGGCCCAGAAACAGGGTTACCCCCGTTACGCTTTTGACCATTTCTTATC
TATTCATACCATACTGGTTGGGTGGGTGTCGGGTCAATATCAAAACCCCT
TTCAGTACCCATGATGGTTCCTCATGCTCACCATAGCACGCCTTACGAAC
CGTTGCTTGTGCGACAAACGACTGATCCGAATCGGTGCGCGTCCCCCCTT
TTCCCCACGACGGCCCGGTCCAGCCTATGGTACAATTTGTTCCAGTTCAT
GACTGGACCGCGACGCCACACGGGGAAGATCTTGACCATCCCCCGGTCTG
ACTTCCACAAGCCGGAGATCCTGCGCTTCTTGGCGCCTTACTTCGACGAC
AAGGATCGCATCGTTGTGCCGGAGACCCCGGCGGCAGACGTTCACGTCCA
AGATGCCGACCTCGAAGAATACCTTCACGAAATGAATTAA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1307:801..2840-

>mRNA_E-fasciculatus_F_contig1307.2325.1 ID=mRNA_E-fasciculatus_F_contig1307.2325.1|Name=mRNA_E-fasciculatus_F_contig1307.2325.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1512bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1307:801..2840- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGACCCGTGTGCTGTTCCGTCTGCACTGCATCCCTGCCACAGCCATCTT
CACGAGGGCAGTCGTCTCGGCGCGCTCGGAACTCCACGCCGACATACGGA
GCGCCATCGCCGACTTCGTCATTCCTATCGCGGAAAAGGAGGCATCCATC
AACAACCCGATGACGGCCGCGGACCTCCTCCGTGGCGTCCGCGAGAGTCT
CCTAGATATCCTCCCGGAGTCGCAGATGACCCGTGTGCTGTTCCGTCTGC
ACTGCATCCCTGCCACAGCCATCTTCACGAGGGCAGTCGTCTCGGCGCGC
TCGGAACTCCACGCCGACATACGGAGCGCCATCGCCGACTTCGTCATTCC
TATCGCGGAAAAGGAGGCATCCATCAACAACCCGATGACGGCCGCGGACC
TCCTCCGTGGCGTCCGCGAGAGTCTCCTAGATATCCTCCCGGAGTCGCAG
GGACTGGCTGGCCTCTTCCACCGCATCATGTTTCGCTTCCTGAAAGCGCA
CCAGGCTTCCTCCCGCGAACCACTCTCGTTGGAGTACCTCCTGGGACCGG
AGAGGCTGCACGACGACTTCCTCGCACAGGTGACGGAAGGGTTGCGGACT
GGCTGGCCTCTTCCACCGCATCATGTTTCGCTTCCTGAAAGCGCACCAGG
CTTCCTCCCGCGAACCACTCTCGTTGGAGTACCTCCTGGGACCGGAGAGG
CTGCACGACGACTTCCTCGCACAGGTGACGGAAGGGTTGCTTGCCACTCC
CGCCTTGCTACATGCCGCGAACGACATCGCGGCCCTGCCGATCAACGAGA
TTGGCACTCATGAGACGATCATCTGCAAGGTAACTCGCAAGGCGAGAGCC
TGGTCTGCGCTGAAGAACGGCGGCTACGGTTCCGCCAATGCCCGGGCTTT
CCAAGAGAGTTGCCACTCCCGCCTTGCTACATGCCGCGAACGACATCGCG
GCCCTGCCGATCAACGAGATTGGCACTCATGAGACGATCATCTGCAAGGT
AACTCGCAAGGCGAGAGCCTGGTCTGCGCTGAAGAACGGCGGCTACGGTT
CCGCCAATGCCCGGGCTTTCCAAGAGAGCCTATGGTACAATTTGTTCCAG
TTCATGACTGGACCGCGACGCCACACGGGGAAGATCTTGACCATCCCCCG
GTCTGACTTCCACAAGCCGGAGATCCTGCGCTTCTTGGCGCCTTACTTCG
ACGACAAGGATCGCATCGTTGTGCCGGAGACCCCGGCGGCAGACGTTCAC
GTCCAAGATGCCGACCTCGAAGAATACCTTCACGAAATGAATTAACCTAT
GGTACAATTTGTTCCAGTTCATGACTGGACCGCGACGCCACACGGGGAAG
ATCTTGACCATCCCCCGGTCTGACTTCCACAAGCCGGAGATCCTGCGCTT
CTTGGCGCCTTACTTCGACGACAAGGATCGCATCGTTGTGCCGGAGACCC
CGGCGGCAGACGTTCACGTCCAAGATGCCGACCTCGAAGAATACCTTCAC
GAAATGAATTAA
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