mRNA_E-fasciculatus_F_contig13053.2315.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig13053.2315.1
Unique NamemRNA_E-fasciculatus_F_contig13053.2315.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig13053.2315.1 vs. uniprot
Match: A0A6H5L335_9PHAE (HECT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L335_9PHAE)

HSP 1 Score: 352 bits (902), Expect = 7.030e-114
Identity = 209/222 (94.14%), Postives = 210/222 (94.59%), Query Frame = 1
Query:    4 QDGWVRCVGTDLKFHWVRHDEDGADPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQRRASVSDKVTLKRKSMLAGSSFRIEGSAFVRKLSKLRPRHFMLELVRAEEATLDASVPEANLTFQHLSRASQLPFKDKVDWFNKQCDLLRVPWDVEHQHLKIRRNNLLEDSMAAMESVRSECMRQRFRFEFLGEPGVDAGGVAREWFHLVSEG 669
            +DGWVRCVGTDLKFHWVRHDEDGADPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXX          LQRRASVSDKVTLKRKS LAGSSFRIEGSAFVRKLSKLRPRHFMLELVRAEEATLDASVPEANLTFQHLSRASQLPFKDKVDWFNKQCDLLRVPWDVEHQHLKIRRNNLLEDSMAAMESVRSE MRQRFRFEFLGEPGVDAGGVAREWFHLVSEG
Sbjct:  250 KDGWVRCVGTDLKFHWVRHDEDGADPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPQQQ-----LQRRASVSDKVTLKRKSTLAGSSFRIEGSAFVRKLSKLRPRHFMLELVRAEEATLDASVPEANLTFQHLSRASQLPFKDKVDWFNKQCDLLRVPWDVEHQHLKIRRNNLLEDSMAAMESVRSESMRQRFRFEFLGEPGVDAGGVAREWFHLVSEG 466          
BLAST of mRNA_E-fasciculatus_F_contig13053.2315.1 vs. uniprot
Match: A0A836CEL7_9STRA (Ubiquitin protein ligase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEL7_9STRA)

HSP 1 Score: 198 bits (504), Expect = 6.500e-56
Identity = 111/225 (49.33%), Postives = 133/225 (59.11%), Query Frame = 1
Query:    4 QDGWVRCVGTDLKFHWVRHDEDGADPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQRRASVSDKVTLKRKSMLAGSSFRIEGSAFVRKLSKL----RPRHFMLELVRAEEATLDASVPEANLTFQHLSRASQLPFKDKVDWFNKQCDLLRVPWDVEHQHLKIRRNNLLEDSMAAMESVRSECMRQRFRFEFLGEPGVDAGGVAREWFHLVSE 666
            Q+GWVRCVGTDLKFHW RHD  GA P                                              S+  KV         GS+F + GSAFVR++ K     RP   M++LVRAEE  LDA+VPE ++ FQHLS+ S  PF+ K+ WF  QCD LRVPW+ EHQHL++RR  LLEDS+ A+ES+R   MR+RFRFEF+GEPGVDAGGVAREWF LVSE
Sbjct:  224 QEGWVRCVGTDLKFHWARHD--GAAPDGKPSDTVLGGPSV-------------------------------GSLGAKVEH------LGSTFNVAGSAFVRRIGKDPETGRP---MVDLVRAEEVALDAAVPEISVNFQHLSKMSSRPFQQKLAWFRTQCDGLRVPWEREHQHLRLRREVLLEDSLRAIESIRPAQMRERFRFEFIGEPGVDAGGVAREWFQLVSE 406          
BLAST of mRNA_E-fasciculatus_F_contig13053.2315.1 vs. uniprot
Match: A0A6V1P524_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P524_HETAK)

HSP 1 Score: 165 bits (417), Expect = 6.440e-45
Identity = 78/133 (58.65%), Postives = 102/133 (76.69%), Query Frame = 1
Query:  268 SSFRIEGSAFVRKLSKLRPRHFMLELVRAEEATLDASVPEANLTFQHLSRASQLPFKDKVDWFNKQCDLLRVPWDVEHQHLKIRRNNLLEDSMAAMESVRSECMRQRFRFEFLGEPGVDAGGVAREWFHLVSE 666
            S F  + SA+VR+L++   R + L LVRA++A ++A VPE ++ FQ L+R +   F+ K +WF  QC +LRVPWD+EHQHLK+RR+NLLEDSM A  +V +E  RQ FRFEF+GEPG+DAGGVAREWFHLVSE
Sbjct:   32 SKFDPQESAYVRQLTR-GERGYELRLVRAQDAVMEARVPETHVGFQDLTRVNAQTFEQKSEWFRNQCSILRVPWDIEHQHLKVRRSNLLEDSMTAFRAVPAEKCRQIFRFEFIGEPGIDAGGVAREWFHLVSE 163          
BLAST of mRNA_E-fasciculatus_F_contig13053.2315.1 vs. uniprot
Match: A0A7S3JWL0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JWL0_9STRA)

HSP 1 Score: 139 bits (350), Expect = 2.840e-34
Identity = 88/236 (37.29%), Postives = 115/236 (48.73%), Query Frame = 1
Query:    4 QDGWVRCVGTDLKFHWVRHDEDGADPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQRRASVSDKVTLKRKSMLAGSSFRIEGSAFVRKLSKLRPR------------HFMLELVRAEEATLDASVPEAN---LTFQHLSRASQLPFKDKVDWFNKQCDLLRVPWDVEHQHLKIRRNNLLEDSMAAMESVRSECMRQRFRFEFLGEPGVDAGGVAREWFHLVSE 666
            +DGWVR + TDL FHWVR +    + A A                                       Q  +  S    L    + +   +  E  AFVR+L K+ P             H +++LVRAE+A L   VP  N      Q LSR + +PF  K  WF +Q   ++VPW+  H  + IRR NLLEDSM A+ES+    M++ FRFEF+GEPGVDAGGVAREWF LVS+
Sbjct:  277 KDGWVRTLSTDLTFHWVRSESIAKEEATAIASNNNTVDSPSATSKND---------------------QNNSEPSSPQAL----LESNQGWTFEKIAFVREL-KIDPNKKDDQNAIKKNEHMIIDLVRAEDAALSTVVPAINNGTSLAQELSRYAAMPFHQKEAWFRQQIAKVQVPWEEGHIKINIRRENLLEDSMEAVESIAQNEMKKIFRFEFIGEPGVDAGGVAREWFQLVSD 486          
BLAST of mRNA_E-fasciculatus_F_contig13053.2315.1 vs. uniprot
Match: A0A4D9CYB2_9STRA (HECT domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CYB2_9STRA)

HSP 1 Score: 137 bits (344), Expect = 1.710e-33
Identity = 79/221 (35.75%), Postives = 109/221 (49.32%), Query Frame = 1
Query:    4 QDGWVRCVGTDLKFHWVRHDEDGADPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQRRASVSDKVTLKRKSMLAGSSFRIEGSAFVRKLSKLRPRHFMLELVRAEEATLDASVPEANLTFQHLSRASQLPFKDKVDWFNKQCDLLRVPWDVEHQHLKIRRNNLLEDSMAAMESVRSECMRQRFRFEFLGEPGVDAGGVAREWFHLVSE 666
            +DGWVRC+G D+KFHW R D    +                                              A V    +L R        F IE +AFVR   K  P+   L L+   E ++D +VP   L F  LS  +QLPF  K+++F + C+ LR PW+  H  +++RR +LL DS+ A E + +  MR+ FRFEFLGEPG+DAGGVAREW+  V++
Sbjct:  266 KDGWVRCLGQDVKFHWFRVDGSNREQGGTT----------------------------------------NAVVGVGGSLGRPK---NGKFSIENTAFVRAF-KGPPQSPDLVLLPPSEVSIDTTVPGTRLNFHTLSHGAQLPFDKKIEFFREHCNSLRTPWERGHMEIRVRRAHLLADSLMAFEGISTANMRKIFRFEFLGEPGIDAGGVAREWYDQVTD 442          
BLAST of mRNA_E-fasciculatus_F_contig13053.2315.1 vs. uniprot
Match: F0YLG4_AURAN (HECT domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YLG4_AURAN)

HSP 1 Score: 129 bits (325), Expect = 2.110e-31
Identity = 86/231 (37.23%), Postives = 112/231 (48.48%), Query Frame = 1
Query:    4 QDGWVRCVGTDLKFHWVRHDEDGADPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQRRASVSDKVTLKRKSMLAGSSFRIEGSAFVRKLSKL-------RPRHFMLELVRAEEATLDASVPEAN---LTFQHLSRASQLPFKDKVDWFNKQCDLLRVPWDVEHQHLKIRRNNLLEDSMAAMESVRSECMRQRFRFEFLGEPGVDAGGVAREWFHLVSE 666
            +DGW+RC+ TDL FHWVR + + AD                                                 SD  + K+        +  E +AFVR+L  L       +  H  L+LV A++A L   VP  N      Q LSR + +PF+ K  WF +Q   L+VPW+  H  + +RR NLLEDSM A ES+    MR+ FRFEF+ EPGVDAGGVAREWF LVS+
Sbjct:   36 KDGWIRCLSTDLTFHWVRSEAE-AD-------------------------------------------------SDHESKKK------LEWAFERTAFVRELRTLTVGTSTSKATH-SLQLVPAKDAALSTVVPAINNGTSLAQELSRYAAMPFQHKEAWFRQQIAKLQVPWEDGHIKINVRRENLLEDSMEATESITQADMRKIFRFEFIAEPGVDAGGVAREWFQLVSD 209          
BLAST of mRNA_E-fasciculatus_F_contig13053.2315.1 vs. uniprot
Match: F0YHF6_AURAN (HECT domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHF6_AURAN)

HSP 1 Score: 129 bits (325), Expect = 6.220e-31
Identity = 85/231 (36.80%), Postives = 110/231 (47.62%), Query Frame = 1
Query:    4 QDGWVRCVGTDLKFHWVRHDEDGADPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQRRASVSDKVTLKRKSMLAGSSFRIEGSAFVRKLSKL-------RPRHFMLELVRAEEATLDASVPEAN---LTFQHLSRASQLPFKDKVDWFNKQCDLLRVPWDVEHQHLKIRRNNLLEDSMAAMESVRSECMRQRFRFEFLGEPGVDAGGVAREWFHLVSE 666
            +DGW+RC+ TDL FHWVR + +                                                   V  +   K+K   A      E +AFVR+L  L       +  H  L+LV A++A L   VP  N      Q LSR + +PF+ K  WF +Q   L+VPW+  H  + +RR NLLEDSM A ES+    MR+ FRFEF+ EPGVDAGGVAREWF LVS+
Sbjct:  265 KDGWIRCLSTDLTFHWVRSEGE---------------------------------------------------VDSEQEAKKKLEWA-----FEQTAFVRELRTLTVGTSTSKATH-SLQLVPAKDAALSTVVPAINNGTSLAQELSRYAAMPFQHKEAWFRQQIAKLQVPWEDGHIKINVRRENLLEDSMEATESITQADMRKIFRFEFIAEPGVDAGGVAREWFQLVSD 438          
BLAST of mRNA_E-fasciculatus_F_contig13053.2315.1 vs. uniprot
Match: A0A7S3ZRC6_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZRC6_9STRA)

HSP 1 Score: 126 bits (316), Expect = 4.060e-30
Identity = 85/230 (36.96%), Postives = 109/230 (47.39%), Query Frame = 1
Query:    4 QDGWVRCVGTDLKFHWVRHDEDGADPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQRRASVSDKVTLKRKSMLAGSSFRIEGSAFVRKL-------SKLRPRHFMLELVRAEEATLDASVPEAN---LTFQHLSRASQLPFKDKVDWFNKQCDLLRVPWDVEHQHLKIRRNNLLEDSMAAMESVRSECMRQRFRFEFLGEPGVDAGGVAREWFHLVS 663
            +DGWVRC+ TDL FHW+R  E   D                                                + D   L         ++  E  AFVR+L       SK +  H  L+LV A+EA+L   VP  N      Q LSR + +PF+ K  WF +Q   ++VPW+  H  + +RR NLL+DSM A ES+    MR+ FRFEF+ EPGVDAGGVAREWF LVS
Sbjct:  248 KDGWVRCLSTDLTFHWIR-SEGEVD----------------------------------------------GQLKDSRDL---------TWAFERIAFVRELRSSATVSSKSKVDH-SLQLVPAKEASLSTVVPAINNGTSLAQELSRYAAMPFQHKEAWFRQQIAKIQVPWEDGHIKINVRRENLLQDSMEATESITQGDMRKIFRFEFISEPGVDAGGVAREWFQLVS 420          
BLAST of mRNA_E-fasciculatus_F_contig13053.2315.1 vs. uniprot
Match: A0A812YZK6_SYMMI (Nedd4 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812YZK6_SYMMI)

HSP 1 Score: 123 bits (309), Expect = 5.940e-30
Identity = 74/219 (33.79%), Postives = 104/219 (47.49%), Query Frame = 1
Query:   16 VRCVGTDLKFHWV-RHDEDGADPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQRRASVSDKVTLKRKSMLAGSSFRIEGSAFVRKLSKLRPRHF-MLELVRAEEATLDASVPEANLTFQHLSRASQLPFKDKVDWFNKQCDLLRVPWDVEHQHLKIRRNNLLEDSMAAMESVRSECMRQRFRFEFLGEPGVDAGGVAREWFHLVSE 666
            +RC+G DL+FHWV  H    AD A +                                                          G SF I   AFVRKL    P     L  V A    +  +VP  ++++  +S  +++PF+ K +W   Q   +R PW+  H  LK+RR +LL+DSM  MES++S  MR+ FRF+F+GEPG+DAGGVAREW++LV+E
Sbjct:    1 MRCLGEDLRFHWVYNHSTTLADAAISK---------------------------------------------------------GRSFDINKMAFVRKLDVPSPGAVGTLTFVEASSYAMSTTVPGTSVSYADISSVARMPFQQKSEWLKIQFTAIRTPWEEGHIKLKVRRASLLQDSMEGMESIQSGDMRKIFRFDFIGEPGLDAGGVAREWYNLVAE 162          
BLAST of mRNA_E-fasciculatus_F_contig13053.2315.1 vs. uniprot
Match: A0A6S8T4N2_9STRA (Hypothetical protein n=12 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8T4N2_9STRA)

HSP 1 Score: 126 bits (316), Expect = 9.900e-30
Identity = 85/230 (36.96%), Postives = 109/230 (47.39%), Query Frame = 1
Query:    4 QDGWVRCVGTDLKFHWVRHDEDGADPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQRRASVSDKVTLKRKSMLAGSSFRIEGSAFVRKL-------SKLRPRHFMLELVRAEEATLDASVPEAN---LTFQHLSRASQLPFKDKVDWFNKQCDLLRVPWDVEHQHLKIRRNNLLEDSMAAMESVRSECMRQRFRFEFLGEPGVDAGGVAREWFHLVS 663
            +DGWVRC+ TDL FHW+R  E   D                                                + D   L         ++  E  AFVR+L       SK +  H  L+LV A+EA+L   VP  N      Q LSR + +PF+ K  WF +Q   ++VPW+  H  + +RR NLL+DSM A ES+    MR+ FRFEF+ EPGVDAGGVAREWF LVS
Sbjct:  248 KDGWVRCLSTDLTFHWIR-SEGEVD----------------------------------------------GQLKDSRDL---------TWAFERIAFVRELRSSATVSSKSKVDH-SLQLVPAKEASLSTVVPAINNGTSLAQELSRYAAMPFQHKEAWFRQQIAKIQVPWEDGHIKINVRRENLLQDSMEATESITQGDMRKIFRFEFISEPGVDAGGVAREWFQLVS 420          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13053.2315.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L335_9PHAE7.030e-11494.14HECT domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A836CEL7_9STRA6.500e-5649.33Ubiquitin protein ligase (Fragment) n=1 Tax=Tribon... [more]
A0A6V1P524_HETAK6.440e-4558.65Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3JWL0_9STRA2.840e-3437.29Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A4D9CYB2_9STRA1.710e-3335.75HECT domain-containing protein n=2 Tax=Monodopsida... [more]
F0YLG4_AURAN2.110e-3137.23HECT domain-containing protein n=1 Tax=Aureococcus... [more]
F0YHF6_AURAN6.220e-3136.80HECT domain-containing protein n=1 Tax=Aureococcus... [more]
A0A7S3ZRC6_9STRA4.060e-3036.96Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A812YZK6_SYMMI5.940e-3033.79Nedd4 protein (Fragment) n=1 Tax=Symbiodinium micr... [more]
A0A6S8T4N2_9STRA9.900e-3036.96Hypothetical protein n=12 Tax=Pelagomonas calceola... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13053contigE-fasciculatus_F_contig13053:126..3268 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score340.9
Seed ortholog evalue4.5e-91
Seed eggNOG ortholog2880.D7FM40
KEGG koko:K04678,ko:K10591,ko:K10592
KEGG Pathwayko04011,ko04120,ko04144,ko04340,ko04341,ko04350,ko04530,ko05169,map04011,map04120,map04144,map04340,map04341,map04350,map04530,map05169
EggNOG free text desc.ubiquitin protein ligase activity
EggNOG OGsCOG5021@1,KOG0940@2759
EC2.3.2.26
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03029,ko04121,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionHECT
Ec32 orthologEc-01_010570.1
Exons4
Model size672
Cds size672
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13053.2315.1prot_E-fasciculatus_F_contig13053.2315.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig13053 126..3268 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927810.6387491-CDS-E-fasciculatus_F_contig13053:125..3771622927810.6387491-CDS-E-fasciculatus_F_contig13053:125..377Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13053 126..377 +
1695995704.305905-CDS-E-fasciculatus_F_contig13053:125..3771695995704.305905-CDS-E-fasciculatus_F_contig13053:125..377Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13053 126..377 +
1622927810.661515-CDS-E-fasciculatus_F_contig13053:1803..18961622927810.661515-CDS-E-fasciculatus_F_contig13053:1803..1896Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13053 1804..1896 +
1695995704.3197455-CDS-E-fasciculatus_F_contig13053:1803..18961695995704.3197455-CDS-E-fasciculatus_F_contig13053:1803..1896Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13053 1804..1896 +
1622927810.6798642-CDS-E-fasciculatus_F_contig13053:2399..25671622927810.6798642-CDS-E-fasciculatus_F_contig13053:2399..2567Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13053 2400..2567 +
1695995704.3291488-CDS-E-fasciculatus_F_contig13053:2399..25671695995704.3291488-CDS-E-fasciculatus_F_contig13053:2399..2567Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13053 2400..2567 +
1622927810.6946192-CDS-E-fasciculatus_F_contig13053:3109..32681622927810.6946192-CDS-E-fasciculatus_F_contig13053:3109..3268Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13053 3110..3268 +
1695995704.3375337-CDS-E-fasciculatus_F_contig13053:3109..32681695995704.3375337-CDS-E-fasciculatus_F_contig13053:3109..3268Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13053 3110..3268 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig13053.2315.1

>prot_E-fasciculatus_F_contig13053.2315.1 ID=prot_E-fasciculatus_F_contig13053.2315.1|Name=mRNA_E-fasciculatus_F_contig13053.2315.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=224bp
MQDGWVRCVGTDLKFHWVRHDEDGADPAAAAAVAVDGEGEAGGSGAGAAA
AAVAPGGDASSSTQPQQQLQRRASVSDKVTLKRKSMLAGSSFRIEGSAFV
RKLSKLRPRHFMLELVRAEEATLDASVPEANLTFQHLSRASQLPFKDKVD
WFNKQCDLLRVPWDVEHQHLKIRRNNLLEDSMAAMESVRSECMRQRFRFE
FLGEPGVDAGGVAREWFHLVSEG*
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mRNA from alignment at E-fasciculatus_F_contig13053:126..3268+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig13053.2315.1 ID=mRNA_E-fasciculatus_F_contig13053.2315.1|Name=mRNA_E-fasciculatus_F_contig13053.2315.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3143bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13053:126..3268+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCAGGACGGCTGGGTGAGATGCGTGGGTACAGACCTCAAGTTTCACTG GGTGCGGCACGACGAAGACGGCGCAGATCCGGCGGCGGCGGCGGCGGTGG CGGTGGATGGGGAGGGCGAGGCAGGGGGGTCGGGAGCGGGAGCGGCGGCG GCGGCGGTAGCGCCCGGAGGGGACGCGAGCAGCTCGACACAACCGCAGCA GCAGCTGCAACGGAGAGCTAGCGTTTCCGACAAGGTCACTCTCAAGCGGA AGGTGCGTGCTTGATGTGAGGGGATGGTTGTACAGGTAGTATTCCGGGAA ACGAACACACAGAGACCGCGTGATGAGGGGTGGGGGAACAAGGCCGATAT TCAAGAGCGTTACAGGAACAAAAAAGGTTTCGACTGCTGTGCTTGTTTTT TTGCAGCTCTCTCCGAAAGAGGGGAGCGGGGCCACCTGGCACAATGCACG TGGGGGGGGGAGAGCGAGTGAGATCCCGTGGGCTTTTGTGCTTTCGTCCG TCAAGTCATGCGCGTCTTACGACGTATGGTACTTTTTTTCAGTTCGTGCT AACTTGTTCATTGTGTTTTCCACGCTTCGGTGGTCCAGTCGGTTCCCGCT CTAATTTATGCGGAGACGTTCGCCAGAGGAAGGAAATGGTGGCACGGGAG GCGCGGTGTTGTAGACGTGCTCTAAATGTGTTTGTGCTCTAAATGTGAAG CACTACTTGTTTTGACGCCCGACGACAACTGCTTGCTCCCACCCTCATTA GTCGTCCTACACGACCGTTGGCGGTGCATAGCGGGGGGGGGGGGAGGGGG GCGTGACCAGAAAAATGTCGTTGTCGTTGTCGCCAGAAAAAGGAAAGGCG TCAGTAGTTGGAGCAACAGCAGTCCTGGCGGGTTTTTTTTTTGTCTGCGC AGAAAAGAGCAAGGTTACGAAATTTTGTTTCATGTTCGACAGCGAGCCTT TGGGCTAGGTTGGTTGTTAGGTCTCGGTAAAAGAGGCTTTGTGCCGCTCA ATCGCCACGGCGTCATGCCCGAGGTTTCGCTCCAGTGTTGCCAGTGTTGG TGTCTCTGCGTCGATTTGTGGCTTCATGAGTGACAATGTTCAAATGCCAG CGCAGTCAAGCTTGCGTCATAGTGTGCCTACAGGGACAATGACAATGTTA ATGTTGTGTGCTGTACCTCTGTGAGACAGGCGCTTGCCAAACATGCTACA ATTAAACAATTTCGATGGCGTCTTTTGGGGGGGGAGCATGTGATGTGACG ATGTGAAGTCGAGAGAAAGGGGCCTTTGCGTCTAAGCAGCTGCACGACAA GAATATGTCTGAATCAATTGATTTTGTTTTTCGTCGGTGTTTGTTCTTTT TCTGCTTCTTGTTTTTGCCCTGCGCTCTCTCGTCTGCTCGTTCCCCCTAA TAAAGCTTGTTTGCGGCCGCTGACGTTTTTTTTTTGCGGTTTCTTTTTTT TGTTTCGTGTTTTGTCCTCCTTTGAACAGCAGCCCGCCATCTCCACCTAC CACCCCCTGTTTGTATGCCTCCTGTTTGTGTAAAGCCGTGGGTTTCACCA TCTGTCCTCATGCTGTAGAGGAGTGGGGCACTATATAGGGTACACCTATG TAGCGGCTGCTGGACTTCGCCGTCCCCTGACCTCACCCCCCCCCCCCCTC ATTCGTTTTTTCGCTCCGGCTGGTGCAGTCGATGCTGGCGGGATCGAGCT TCCGCATCGAAGGAAGCGCGTTCGTTCGTAAGCTTTCCAAGCTAAGGCCT CGACACTTTATGCTTGAGCTGGTGAGCTTTTTTTTTTTAGTAGGTGTACA TGGCACACTGTTCACACAGCGAGAGAAAGTAACCGTGGAGTTGGATGGAG AGTCGTACCGTGATGACCCCCTGTGTTTTGCTTGGGAGTTCGTGGCGGGA GGAGAGGGCCGGCGCATATGAACCGTACTGTCTGCTATGATGAGGTCGTG CTGCTGTTGTAGTTTCTTTGTGAATGCGTGGAAACTTTGTGAGCAGTGAC GGGATTAATCGACCACCTGTCAGACACCACCACCACCACCACCACCACCA GCAAGAACAAAAACAATCCGACATTCCACCGCCGTTACGAAAATAAAACA AAACACGAAAGCCGAGAGCAGACAAGCGATGCCCCGTGCCCCCAGCCTCA AAACCAATCCAACCAACCAACCCTTACCCTTTGCCATGCTCAAGAACCCA AACCGATCCGATCCCCCGATACATACATACACATACCGTCCGCAAACGGG CGGGCGTTATTGTCGTGTGGGCAGGTACGAGCAGAAGAAGCGACCCTTGA CGCGAGCGTACCGGAGGCGAACCTGACCTTCCAGCACCTGAGCCGGGCGA GCCAGCTCCCTTTCAAGGATAAGGTGGACTGGTTTAACAAGCAGTGCGAC CTCCTGAGAGTACCGTGGGACGTCGAGCATCAGCACCTCAAGGTGTGTAT TGTATAGTGCATATACGTGTGGTTCTTGTTATTAGTTATTAGCATGGACC GCGCTACTCTAACCGGCTGATTATGCCAATGAAGAGACGTCGGCCTCATC TCCATCTCAGTGCGGTCGAAAGCGCAAAATGCTTCTAAAGTTTTGTAGCA TGTAACATGTAAGATGTAACATGTAACATGTAAGATGTAACATGTAACAT GTAACATGTAACATGTAACATGTAACATGTAACATGTAACATGTAACATG TAAGATGTAAGATGTAAGATGTAAGATGTAAGATGTAAGATGTAAGATGT ACTGTACTTGGTTATGGCCCAACCTCGTGCACGGCACTCAACGAATTTCT TGCTCTTCCGCCTGGGACGCTTTGTACAATTGTATATTGTATCGTCAGCC GTAGTAAAGAAGCGTTTTTTTCATCACGTAGGAATAGGAGGCTGTATGTC TTGTTTCTTTTTTTGCTGCACATGTCTTGACCTCAAATCAGAGAGAGCTC ACACCGCTCGTGCCGGACACGTTCATACGTTCAGATTCGGAGGAATAATT TGTTGGAGGACAGCATGGCGGCTATGGAGAGCGTTCGGTCGGAGTGCATG CGGCAAAGGTTCCGGTTCGAGTTTCTGGGGGAGCCCGGCGTTGACGCGGG AGGAGTCGCAAGGGAGTGGTTCCACCTTGTCTCAGAAGGGTGA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13053:126..3268+

>mRNA_E-fasciculatus_F_contig13053.2315.1 ID=mRNA_E-fasciculatus_F_contig13053.2315.1|Name=mRNA_E-fasciculatus_F_contig13053.2315.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1344bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13053:126..3268+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCAGGACGGCTGGGTGAGATGCGTGGGTACAGACCTCAAGTTTCACTG
GGTGCGGCACGACGAAGACGGCGCAGATCCGGCGGCGGCGGCGGCGGTGG
CGGTGGATGGGGAGGGCGAGGCAGGGGGGTCGGGAGCGGGAGCGGCGGCG
GCGGCGGTAGCGCCCGGAGGGGACGCGAGCAGCTCGACACAACCGCAGCA
GCAGCTGCAACGGAGAGCTAGCGTTTCCGACAAGGTCACTCTCAAGCGGA
AGATGCAGGACGGCTGGGTGAGATGCGTGGGTACAGACCTCAAGTTTCAC
TGGGTGCGGCACGACGAAGACGGCGCAGATCCGGCGGCGGCGGCGGCGGT
GGCGGTGGATGGGGAGGGCGAGGCAGGGGGGTCGGGAGCGGGAGCGGCGG
CGGCGGCGGTAGCGCCCGGAGGGGACGCGAGCAGCTCGACACAACCGCAG
CAGCAGCTGCAACGGAGAGCTAGCGTTTCCGACAAGGTCACTCTCAAGCG
GAAGTCGATGCTGGCGGGATCGAGCTTCCGCATCGAAGGAAGCGCGTTCG
TTCGTAAGCTTTCCAAGCTAAGGCCTCGACACTTTATGCTTGAGCTGTCG
ATGCTGGCGGGATCGAGCTTCCGCATCGAAGGAAGCGCGTTCGTTCGTAA
GCTTTCCAAGCTAAGGCCTCGACACTTTATGCTTGAGCTGGTACGAGCAG
AAGAAGCGACCCTTGACGCGAGCGTACCGGAGGCGAACCTGACCTTCCAG
CACCTGAGCCGGGCGAGCCAGCTCCCTTTCAAGGATAAGGTGGACTGGTT
TAACAAGCAGTGCGACCTCCTGAGAGTACCGTGGGACGTCGAGCATCAGC
ACCTCAAGGTACGAGCAGAAGAAGCGACCCTTGACGCGAGCGTACCGGAG
GCGAACCTGACCTTCCAGCACCTGAGCCGGGCGAGCCAGCTCCCTTTCAA
GGATAAGGTGGACTGGTTTAACAAGCAGTGCGACCTCCTGAGAGTACCGT
GGGACGTCGAGCATCAGCACCTCAAGATTCGGAGGAATAATTTGTTGGAG
GACAGCATGGCGGCTATGGAGAGCGTTCGGTCGGAGTGCATGCGGCAAAG
GTTCCGGTTCGAGTTTCTGGGGGAGCCCGGCGTTGACGCGGGAGGAGTCG
CAAGGGAGTGGTTCCACCTTGTCTCAGAAGGGTGAATTCGGAGGAATAAT
TTGTTGGAGGACAGCATGGCGGCTATGGAGAGCGTTCGGTCGGAGTGCAT
GCGGCAAAGGTTCCGGTTCGAGTTTCTGGGGGAGCCCGGCGTTGACGCGG
GAGGAGTCGCAAGGGAGTGGTTCCACCTTGTCTCAGAAGGGTGA
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