mRNA_E-fasciculatus_F_contig13047.2309.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13047.2309.1 vs. uniprot
Match: D7FUB7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUB7_ECTSI) HSP 1 Score: 351 bits (900), Expect = 6.270e-118 Identity = 169/179 (94.41%), Postives = 174/179 (97.21%), Query Frame = 1
Query: 1 QIKSVPYRCEDWSSRERLAILSMCNKLGSTIGGCERLVQTPVPLHYVRHTSRFLTIWCFLLPLVIVGEMGMATAPVVFLATWALFGIQEIGLLIEDPFQSALSLDIMCNSVYTDVMQTVGAADPTLPQQPIPMQVGIAVADLEEARVDEDVVPLSARCKHPILADWTHDGSERHTELAH 537
+IKSVPYRCEDWSSRERLAILSMCNKLGSTIGGCERLVQTPVPLHYVRHTSRFLTIWCFLLPLVIVGEMGMATAPVVFLATWALFGIQEIGLLIEDPFQSALSLDIMCNSVYTDVMQTVG ADPTLPQQPIPMQVGIAVADL++ RVD+DVVPLSARCKHP+LADW HD SER TELAH
Sbjct: 297 EIKSVPYRCEDWSSRERLAILSMCNKLGSTIGGCERLVQTPVPLHYVRHTSRFLTIWCFLLPLVIVGEMGMATAPVVFLATWALFGIQEIGLLIEDPFQSALSLDIMCNSVYTDVMQTVGVADPTLPQQPIPMQVGIAVADLQDTRVDQDVVPLSARCKHPVLADWNHDASERQTELAH 475
BLAST of mRNA_E-fasciculatus_F_contig13047.2309.1 vs. uniprot
Match: A0A6V2T5N7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2T5N7_HETAK) HSP 1 Score: 149 bits (375), Expect = 9.210e-40 Identity = 69/122 (56.56%), Postives = 90/122 (73.77%), Query Frame = 1
Query: 4 IKSVPYRCEDWSSRERLAILSMCNKLGSTIGGCERLVQTPVPLHYVRHTSRFLTIWCFLLPLVIVGEMGMATAPVVFLATWALFGIQEIGLLIEDPFQSALSLDIMCNSVYTDVMQTVGAAD 369
+K V Y W+SRERLA+L++ N L TIG CERLVQTPVPL Y RHT+RFL++W LPL + G+MG P + L WALFGIQEIGL IEDPF+ AL L+++ +++Y DV+QT+G+ D
Sbjct: 282 VKGVEYSAA-WTSRERLALLALVNSLSDTIGACERLVQTPVPLAYTRHTNRFLSLWVLSLPLTLAGDMGWGAVPAMGLVAWALFGIQEIGLTIEDPFRRALKLEVIADTIYADVIQTMGSRD 402
BLAST of mRNA_E-fasciculatus_F_contig13047.2309.1 vs. uniprot
Match: A0A7S3ZCR8_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZCR8_9EUKA) HSP 1 Score: 143 bits (360), Expect = 1.030e-39 Identity = 68/128 (53.12%), Postives = 94/128 (73.44%), Query Frame = 1
Query: 34 WSSRERLAILSMCNKLGSTIGGCERLVQTPVPLHYVRHTSRFLTIWCFLLPLVIVGEMGMATAPVVFLATWALFGIQEIGLLIEDPFQSALSLDIMCNSVYTDVMQTVG--AADPTLPQQPIPMQVGI 411
+SSRERLA+L M + + IGGCER+VQTPVPL+Y RHTSRFLT WC LP+ +V E+G A PV L WA+FGIQEIGL+IE+PF+ AL+L + CN+++ D+ +T+ A++ P P P ++G+
Sbjct: 44 FSSRERLAMLKMVDDMTGYIGGCERIVQTPVPLNYARHTSRFLTFWCLALPMALVSELGFAVVPVTALVVWAMFGIQEIGLMIEEPFRRALALHVFCNTIHHDIEETLEFHASNYNPPPSPFP-RIGV 170
BLAST of mRNA_E-fasciculatus_F_contig13047.2309.1 vs. uniprot
Match: A0A7S4DXN2_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DXN2_9EUKA) HSP 1 Score: 149 bits (375), Expect = 6.170e-39 Identity = 68/108 (62.96%), Postives = 88/108 (81.48%), Query Frame = 1
Query: 34 WSSRERLAILSMCNKLGSTIGGCERLVQTPVPLHYVRHTSRFLTIWCFLLPLVIVGEMGMATAPVVFLATWALFGIQEIGLLIEDPFQSALSLDIMCNSVYTDVMQTV 357
++SRERLA+L +KL +G ER+VQTPVPL+Y RHTSRFLT WC LP+ IVGE+G A+ PV+ L TWAL+GIQEIGL+IE+PF+ +LSL + CN++YTDVM+TV
Sbjct: 344 FASRERLAMLRTVDKLTECMGAAERIVQTPVPLNYARHTSRFLTFWCLTLPIAIVGELGFASIPVMALVTWALYGIQEIGLMIEEPFRRSLSLHVFCNTIYTDVMETV 451
BLAST of mRNA_E-fasciculatus_F_contig13047.2309.1 vs. uniprot
Match: A0A7S2G241_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G241_9STRA) HSP 1 Score: 140 bits (352), Expect = 1.390e-37 Identity = 67/127 (52.76%), Postives = 93/127 (73.23%), Query Frame = 1
Query: 1 QIKSVPYRCED----WSSRERLAILSMCNKLGSTIGGCERLVQTPVPLHYVRHTSRFLTIWCFLLPLVIVGEMGMATAPVVFLATWALFGIQEIGLLIEDPFQSALSLDIMCNSVYTDVMQTVGAAD 369
+IK++P + +SSRERL L + ++G++I CERLVQTPVPL+YVRHTSR LTIWC LPL + E+GM T PV+F +WALFGIQEIGL+IE+PF+ +L L++M ++ DVM+ + A+
Sbjct: 133 EIKAIPDQHSGDQIMFSSRERLTFLKLVEQMGNSISQCERLVQTPVPLNYVRHTSRLLTIWCLTLPLALASELGMITVPVLFCISWALFGIQEIGLMIEEPFRRSLRLEVMTKTISDDVMEIMTTAN 259
BLAST of mRNA_E-fasciculatus_F_contig13047.2309.1 vs. uniprot
Match: A0A7S1UCQ9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UCQ9_9STRA) HSP 1 Score: 137 bits (345), Expect = 5.250e-36 Identity = 63/108 (58.33%), Postives = 83/108 (76.85%), Query Frame = 1
Query: 34 WSSRERLAILSMCNKLGSTIGGCERLVQTPVPLHYVRHTSRFLTIWCFLLPLVIVGEMGMATAPVVFLATWALFGIQEIGLLIEDPFQSALSLDIMCNSVYTDVMQTV 357
+SSRERL++L+M LG +G ERLVQTPVPL Y RHTSRFL++WC LP V+VGE+G+ T P++ L TWALFGIQEIGL+IE+PF +L L ++C+S+ DV +
Sbjct: 175 FSSRERLSLLNMLKSLGQRVGAAERLVQTPVPLMYARHTSRFLSMWCLTLPFVLVGELGLWTVPLMTLVTWALFGIQEIGLMIENPFGVSLKLSVICDSISLDVRDII 282
BLAST of mRNA_E-fasciculatus_F_contig13047.2309.1 vs. uniprot
Match: A0A7S2X9N0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2X9N0_9EUKA) HSP 1 Score: 125 bits (315), Expect = 2.700e-34 Identity = 54/91 (59.34%), Postives = 71/91 (78.02%), Query Frame = 1
Query: 85 STIGGCERLVQTPVPLHYVRHTSRFLTIWCFLLPLVIVGEMGMATAPVVFLATWALFGIQEIGLLIEDPFQSALSLDIMCNSVYTDVMQTV 357
S IG CER+VQTPVPL+Y RHTSRFLT WC LP+ +V E+G A PV L WA+FGIQEIGL+IE+PF+ AL+L + CN+++ D+ +T+
Sbjct: 3 SYIGACERIVQTPVPLNYARHTSRFLTFWCLALPMALVKELGFAVVPVTALVVWAMFGIQEIGLMIEEPFRRALALHVFCNTIHHDIQETL 93
BLAST of mRNA_E-fasciculatus_F_contig13047.2309.1 vs. uniprot
Match: A0A7S3BY08_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BY08_9EUKA) HSP 1 Score: 125 bits (315), Expect = 1.540e-33 Identity = 60/112 (53.57%), Postives = 78/112 (69.64%), Query Frame = 1
Query: 34 WSSRERLAILSMCNKLGSTIGGCERLVQTPVPLHYVRHTSRFLTIWCFLLPLVIVGEMGMATAPVVFLATWALFGIQEIGLLIEDPFQSALSLDIMCNSVYTDVMQTVGAAD 369
+S+RERLA+L + L IG CER+VQTPVPLHY RHTSR TI+ LP V+ E+G+ P + + WALFGIQEIGLLIE+PF+ L LD +C ++ +DV QT+ D
Sbjct: 3 FSARERLAMLGKISALSDCIGACERIVQTPVPLHYARHTSRLATIFVNTLPFVLARELGLLLVPTMAVICWALFGIQEIGLLIEEPFREVLKLDAICKTITSDVYQTLECGD 114
BLAST of mRNA_E-fasciculatus_F_contig13047.2309.1 vs. uniprot
Match: L1IYQ9_GUITC (Uncharacterized protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IYQ9_GUITC) HSP 1 Score: 129 bits (324), Expect = 1.950e-33 Identity = 57/95 (60.00%), Postives = 73/95 (76.84%), Query Frame = 1
Query: 13 VPYRCEDWSSRERLAILSMCNKLGSTIGGCERLVQTPVPLHYVRHTSRFLTIWCFLLPLVIVGEMGMATAPVVFLATWALFGIQ-EIGLLIEDPF 294
VPY+ + W+SRERLA+L M N+LG +GGCER+VQTP+PLHY RHT RF+ ++C LPLV +GEMG+ P V W L+G+Q EIGLLIE+PF
Sbjct: 183 VPYQSDRWTSRERLAVLGMINELGKCVGGCERIVQTPIPLHYARHTGRFMGLFCLTLPLVFIGEMGLLAVPAVACVVWCLYGVQQEIGLLIENPF 277
BLAST of mRNA_E-fasciculatus_F_contig13047.2309.1 vs. uniprot
Match: A0A7S2V428_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V428_9STRA) HSP 1 Score: 128 bits (322), Expect = 3.860e-33 Identity = 58/122 (47.54%), Postives = 85/122 (69.67%), Query Frame = 1
Query: 1 QIKSVPYRCEDWSSRERLAILSMCNKLGSTIGGCERLVQTPVPLHYVRHTSRFLTIWCFLLPLVIVGEMGMATAPVVFLATWALFGIQEIGLLIEDPFQS--ALSLDIMCNSVYTDVMQTVG 360
+ K+ P W+SRERL ++ M ++L +G CERL+Q PVPL Y RHTSRFLTIW LPL++ +MG+AT P + + +W L+GIQE+GL+IEDPF++ L L+ N ++ D++ T+G
Sbjct: 158 ECKATPLNALTWTSRERLTLVKMLDRLSEGLGACERLIQIPVPLAYARHTSRFLTIWVMSLPLMMAKDMGIATVPALGVISWGLYGIQELGLIIEDPFKNRQVLRLEHFSNRIFQDILDTLG 279 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13047.2309.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13047.2309.1 >prot_E-fasciculatus_F_contig13047.2309.1 ID=prot_E-fasciculatus_F_contig13047.2309.1|Name=mRNA_E-fasciculatus_F_contig13047.2309.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=180bp QIKSVPYRCEDWSSRERLAILSMCNKLGSTIGGCERLVQTPVPLHYVRHTback to top mRNA from alignment at E-fasciculatus_F_contig13047:1474..3556- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13047.2309.1 ID=mRNA_E-fasciculatus_F_contig13047.2309.1|Name=mRNA_E-fasciculatus_F_contig13047.2309.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2083bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13047:1474..3556- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13047:1474..3556- >mRNA_E-fasciculatus_F_contig13047.2309.1 ID=mRNA_E-fasciculatus_F_contig13047.2309.1|Name=mRNA_E-fasciculatus_F_contig13047.2309.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1080bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13047:1474..3556- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |