mRNA_E-fasciculatus_F_contig13046.2308.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig13046.2308.1
Unique NamemRNA_E-fasciculatus_F_contig13046.2308.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig13046.2308.1 vs. uniprot
Match: D7FPB2_ECTSI (Proteasome subunit alpha type n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPB2_ECTSI)

HSP 1 Score: 253 bits (645), Expect = 2.210e-83
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 2 
Query:    2 YAFKAAMGPGLTSVSVRGKETSVMVTQKKVPDRLIDPTSVTNIFKITDKIGCLMTGMIADSRVLVQRLRYEAHEFRFKYGYDCPAHVLARRIADIAQVYTQQASMRALACVAMLIAVDDEKGPQLFK 382
            YAFKAAMGPGLTSVSVRGKETSVMVTQKKVPDRLIDPTSVTNIFKITDKIGCLMTGMIADSRVLVQRLRYEAHEFRFKYGYDCPAHVLARRIADIAQVYTQQASMRALACVAMLIAVDDEKGPQLFK
Sbjct:   25 YAFKAAMGPGLTSVSVRGKETSVMVTQKKVPDRLIDPTSVTNIFKITDKIGCLMTGMIADSRVLVQRLRYEAHEFRFKYGYDCPAHVLARRIADIAQVYTQQASMRALACVAMLIAVDDEKGPQLFK 151
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BLAST of mRNA_E-fasciculatus_F_contig13046.2308.1 vs. uniprot
Match: A0A835YUN1_9STRA (Proteasome subunit alpha type n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUN1_9STRA)

HSP 1 Score: 207 bits (526), Expect = 2.600e-65
Identity = 99/127 (77.95%), Postives = 112/127 (88.19%), Query Frame = 2 
Query:    2 YAFKAAMGPGLTSVSVRGKETSVMVTQKKVPDRLIDPTSVTNIFKITDKIGCLMTGMIADSRVLVQRLRYEAHEFRFKYGYDCPAHVLARRIADIAQVYTQQASMRALACVAMLIAVDDEKGPQLFK 382
            YAFKAA   GLTSV+VRGK+  V+VTQKKVPDRLIDP SVTN+F++TD++GCLMTGM AD+R  VQRLRYEAHEFRFKYGYD P   LARR ADI QVYTQQAS+RALACVA+L+AVDDEKGPQ+FK
Sbjct:   25 YAFKAASSSGLTSVAVRGKDACVVVTQKKVPDRLIDPASVTNLFRVTDRVGCLMTGMTADARASVQRLRYEAHEFRFKYGYDVPVGTLARRFADICQVYTQQASLRALACVALLVAVDDEKGPQVFK 151
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BLAST of mRNA_E-fasciculatus_F_contig13046.2308.1 vs. uniprot
Match: A0A4D9D8R2_9STRA (PROTEASOME_ALPHA_1 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8R2_9STRA)

HSP 1 Score: 196 bits (497), Expect = 4.380e-56
Identity = 97/127 (76.38%), Postives = 109/127 (85.83%), Query Frame = 2 
Query:    2 YAFKAAMGPGLTSVSVRGKETSVMVTQKKVPDRLIDPTSVTNIFKITDKIGCLMTGMIADSRVLVQRLRYEAHEFRFKYGYDCPAHVLARRIADIAQVYTQQASMRALACVAMLIAVDDEKGPQLFK 382
            YAFKAA   GLTSV+VRGKE   +VTQKKVPDRLIDP+SV+NI++ITDK+G +MTGM  DSR  V RLR EAHEFRFKYGYD P HVLA+RIADIAQVYTQQASMRALA V ML+ VDDE+GPQL+K
Sbjct:   51 YAFKAANSEGLTSVAVRGKECVAVVTQKKVPDRLIDPSSVSNIYQITDKLGAVMTGMTTDSRAQVTRLRQEAHEFRFKYGYDIPVHVLAKRIADIAQVYTQQASMRALATVCMLVGVDDERGPQLYK 177
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BLAST of mRNA_E-fasciculatus_F_contig13046.2308.1 vs. uniprot
Match: A0A067BYZ3_SAPPC (Proteasome subunit alpha type n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BYZ3_SAPPC)

HSP 1 Score: 182 bits (463), Expect = 9.040e-56
Identity = 90/127 (70.87%), Postives = 105/127 (82.68%), Query Frame = 2 
Query:    2 YAFKAAMGPGLTSVSVRGKETSVMVTQKKVPDRLIDPTSVTNIFKITDKIGCLMTGMIADSRVLVQRLRYEAHEFRFKYGYDCPAHVLARRIADIAQVYTQQASMRALACVAMLIAVDDEKGPQLFK 382
            YAFKA     LTSV+VRG ++ V+VTQKKVPD+LIDP SVTNIFKIT  IGCLMTG+ AD++  VQRLRYEAH+F  KYGY  P HVLA+R+ADI+QVYTQ ASMRAL  V MLI+VD+EKGPQL+K
Sbjct:   24 YAFKAVKESSLTSVAVRGAKSCVVVTQKKVPDKLIDPDSVTNIFKITPLIGCLMTGLYADAKAQVQRLRYEAHDFEHKYGYPVPCHVLAKRLADISQVYTQHASMRALGVVTMLISVDEEKGPQLYK 150
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BLAST of mRNA_E-fasciculatus_F_contig13046.2308.1 vs. uniprot
Match: K8YP06_NANGC (Proteasome subunit alpha type n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8YP06_NANGC)

HSP 1 Score: 182 bits (462), Expect = 1.280e-55
Identity = 93/127 (73.23%), Postives = 105/127 (82.68%), Query Frame = 2 
Query:    2 YAFKAAMGPGLTSVSVRGKETSVMVTQKKVPDRLIDPTSVTNIFKITDKIGCLMTGMIADSRVLVQRLRYEAHEFRFKYGYDCPAHVLARRIADIAQVYTQQASMRALACVAMLIAVDDEKGPQLFK 382
            YAFKAA   GLTSV+VRGKE   +VTQKKVPDRLIDP+SV+NI++ITDK+G +MTGM  DSR  V RLR EAHEFRFKYGYD P HVLA+RIADIAQ    QASMRALA V ML+ VDDE+GPQL+K
Sbjct:   26 YAFKAANSEGLTSVAVRGKECVAVVTQKKVPDRLIDPSSVSNIYQITDKVGAVMTGMTTDSRAQVTRLRQEAHEFRFKYGYDIPVHVLAKRIADIAQ----QASMRALATVCMLVGVDDERGPQLYK 148
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BLAST of mRNA_E-fasciculatus_F_contig13046.2308.1 vs. uniprot
Match: A0A7S2WQZ1_9STRA (Proteasome subunit alpha type n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WQZ1_9STRA)

HSP 1 Score: 182 bits (462), Expect = 1.400e-55
Identity = 89/127 (70.08%), Postives = 105/127 (82.68%), Query Frame = 2 
Query:    2 YAFKAAMGPGLTSVSVRGKETSVMVTQKKVPDRLIDPTSVTNIFKITDKIGCLMTGMIADSRVLVQRLRYEAHEFRFKYGYDCPAHVLARRIADIAQVYTQQASMRALACVAMLIAVDDEKGPQLFK 382
            YA KAA   GLT+V+VRG  +  MV QKKVPDRLIDP+SVT +++IT+KIGCLMTG+ AD RV V RLR EAHEF+F YGYD P HVLA+RIADI+QVYTQ+AS+R LAC  +L +VDDEKGPQLFK
Sbjct:   26 YAIKAAENTGLTAVAVRGANSCAMVIQKKVPDRLIDPSSVTYVYQITEKIGCLMTGLTADCRVQVTRLRQEAHEFKFNYGYDMPVHVLAKRIADISQVYTQEASLRMLACNVILSSVDDEKGPQLFK 152
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BLAST of mRNA_E-fasciculatus_F_contig13046.2308.1 vs. uniprot
Match: A0A7S2XVL7_9STRA (Proteasome subunit alpha type n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVL7_9STRA)

HSP 1 Score: 181 bits (459), Expect = 3.990e-55
Identity = 86/127 (67.72%), Postives = 106/127 (83.46%), Query Frame = 2 
Query:    2 YAFKAAMGPGLTSVSVRGKETSVMVTQKKVPDRLIDPTSVTNIFKITDKIGCLMTGMIADSRVLVQRLRYEAHEFRFKYGYDCPAHVLARRIADIAQVYTQQASMRALACVAMLIAVDDEKGPQLFK 382
            YA KAA   GLTS++VRG ET  +VTQKKVPDRLIDP SVT+++++ +KIGCLMTGM AD+RV+VQRLRYEA E+RFK+GYD P HVLARR+AD++QVYTQ A +RA+A   +L  VDDEKGP LF+
Sbjct:   26 YAKKAANSSGLTSIAVRGAETCALVTQKKVPDRLIDPESVTSLYQVNNKIGCLMTGMTADARVVVQRLRYEAAEYRFKHGYDVPVHVLARRLADLSQVYTQHAGIRAMAATTILAGVDDEKGPMLFR 152
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BLAST of mRNA_E-fasciculatus_F_contig13046.2308.1 vs. uniprot
Match: F0W2W5_9STRA (Proteasome subunit alpha type n=2 Tax=Albugo TaxID=65356 RepID=F0W2W5_9STRA)

HSP 1 Score: 180 bits (456), Expect = 1.040e-54
Identity = 88/127 (69.29%), Postives = 104/127 (81.89%), Query Frame = 2 
Query:    2 YAFKAAMGPGLTSVSVRGKETSVMVTQKKVPDRLIDPTSVTNIFKITDKIGCLMTGMIADSRVLVQRLRYEAHEFRFKYGYDCPAHVLARRIADIAQVYTQQASMRALACVAMLIAVDDEKGPQLFK 382
            YAFKA  G GLTSV+VRG ++ V +TQKKV D+LIDP SVT+IF+IT +IGCLMTGM AD++  VQRLRYEA+EF FK+GY  P +VLA+R ADIAQVYTQ ASMRA   V MLI +DDEKGPQL+K
Sbjct:   24 YAFKAVQGSGLTSVAVRGMDSCVFITQKKVQDKLIDPESVTHIFQITAEIGCLMTGMYADAKAQVQRLRYEANEFAFKFGYSVPCYVLAKRAADIAQVYTQHASMRAFGVVTMLIGIDDEKGPQLYK 150
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BLAST of mRNA_E-fasciculatus_F_contig13046.2308.1 vs. uniprot
Match: A0A6G0XHM2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XHM2_9STRA)

HSP 1 Score: 179 bits (455), Expect = 1.860e-54
Identity = 89/127 (70.08%), Postives = 104/127 (81.89%), Query Frame = 2 
Query:    2 YAFKAAMGPGLTSVSVRGKETSVMVTQKKVPDRLIDPTSVTNIFKITDKIGCLMTGMIADSRVLVQRLRYEAHEFRFKYGYDCPAHVLARRIADIAQVYTQQASMRALACVAMLIAVDDEKGPQLFK 382
            YAFKA    GLTSV+VRG ++ V+VTQKKV D+LIDP SVTNIFKIT  IGCLMTG+ AD++  VQRLRYEAHEF  K+GY  P HVLA+R+ADI+QVYTQ ASMRAL  V +LI +D+EKGPQLFK
Sbjct:   32 YAFKAVKESGLTSVAVRGAKSCVVVTQKKVADKLIDPDSVTNIFKITPAIGCLMTGLYADAKAQVQRLRYEAHEFENKFGYAVPVHVLAKRLADISQVYTQHASMRALGVVTILIGIDEEKGPQLFK 158
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BLAST of mRNA_E-fasciculatus_F_contig13046.2308.1 vs. uniprot
Match: H3G9M2_PHYRM (Proteasome subunit alpha type n=26 Tax=Oomycota TaxID=4762 RepID=H3G9M2_PHYRM)

HSP 1 Score: 179 bits (453), Expect = 2.960e-54
Identity = 86/127 (67.72%), Postives = 106/127 (83.46%), Query Frame = 2 
Query:    2 YAFKAAMGPGLTSVSVRGKETSVMVTQKKVPDRLIDPTSVTNIFKITDKIGCLMTGMIADSRVLVQRLRYEAHEFRFKYGYDCPAHVLARRIADIAQVYTQQASMRALACVAMLIAVDDEKGPQLFK 382
            YAF+AA    LTSV+VRGK+++V VTQKKV D+LI+P SVTN+F+IT +IGCLMTG+ ADS+  VQRLR+EAHEF  K+GY  P HVLA+RIAD+AQVYTQ ASMRA   + ML++VD+EKGPQLFK
Sbjct:   24 YAFRAAKESTLTSVAVRGKDSAVFVTQKKVQDKLIEPDSVTNVFQITPEIGCLMTGLYADSKAQVQRLRFEAHEFENKFGYKIPCHVLAKRIADVAQVYTQHASMRAFGVITMLVSVDEEKGPQLFK 150
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13046.2308.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPB2_ECTSI2.210e-83100.00Proteasome subunit alpha type n=1 Tax=Ectocarpus s... [more]
A0A835YUN1_9STRA2.600e-6577.95Proteasome subunit alpha type n=1 Tax=Tribonema mi... [more]
A0A4D9D8R2_9STRA4.380e-5676.38PROTEASOME_ALPHA_1 domain-containing protein n=1 T... [more]
A0A067BYZ3_SAPPC9.040e-5670.87Proteasome subunit alpha type n=4 Tax=Saprolegniac... [more]
K8YP06_NANGC1.280e-5573.23Proteasome subunit alpha type n=2 Tax=Nannochlorop... [more]
A0A7S2WQZ1_9STRA1.400e-5570.08Proteasome subunit alpha type n=2 Tax=Rhizochromul... [more]
A0A7S2XVL7_9STRA3.990e-5567.72Proteasome subunit alpha type n=1 Tax=Fibrocapsa j... [more]
F0W2W5_9STRA1.040e-5469.29Proteasome subunit alpha type n=2 Tax=Albugo TaxID... [more]
A0A6G0XHM2_9STRA1.860e-5470.08Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
H3G9M2_PHYRM2.960e-5467.72Proteasome subunit alpha type n=26 Tax=Oomycota Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13046contigE-fasciculatus_F_contig13046:104..1987 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score242.3
Seed ortholog evalue1.2e-61
Seed eggNOG ortholog2880.D7FPB2
Preferred namePSMA6
KEGG koko:K02730
KEGG Pathwayko03050,map03050
KEGG ModuleM00337,M00340
GOsGO:0000502,GO:0000932,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0003824,GO:0004175,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005773,GO:0005774,GO:0005829,GO:0005839,GO:0005840,GO:0005844,GO:0006355,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0007088,GO:0007275,GO:0007346,GO:0007517,GO:0007519,GO:0008134,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009888,GO:0009889,GO:0009896,GO:0009987,GO:0010035,GO:0010038,GO:0010043,GO:0010468,GO:0010498,GO:0010499,GO:0010556,GO:0010564,GO:0010638,GO:0010965,GO:0012505,GO:0014706,GO:0016020,GO:0016363,GO:0016579,GO:0016787,GO:0019219,GO:0019222,GO:0019538,GO:0019773,GO:0019941,GO:0022626,GO:0030016,GO:0030017,GO:0030071,GO:0030163,GO:0031090,GO:0031323,GO:0031326,GO:0031331,GO:0031347,GO:0031597,GO:0031974,GO:0031981,GO:0032101,GO:0032270,GO:0032436,GO:0032501,GO:0032502,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0034399,GO:0034515,GO:0035639,GO:0035770,GO:0036211,GO:0036464,GO:0042175,GO:0042221,GO:0042788,GO:0043161,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043292,GO:0043412,GO:0043632,GO:0043687,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044437,GO:0044444,GO:0044445,GO:0044446,GO:0044449,GO:0044464,GO:0045732,GO:0045787,GO:0045840,GO:0045842,GO:0045862,GO:0045931,GO:0048513,GO:0048518,GO:0048522,GO:0048583,GO:0048731,GO:0048856,GO:0050727,GO:0050789,GO:0050794,GO:0050896,GO:0051059,GO:0051090,GO:0051091,GO:0051092,GO:0051128,GO:0051130,GO:0051171,GO:0051247,GO:0051252,GO:0051603,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0060255,GO:0060537,GO:0060538,GO:0061061,GO:0062033,GO:0065007,GO:0065009,GO:0070011,GO:0070013,GO:0070646,GO:0070647,GO:0071704,GO:0080090,GO:0080134,GO:0090068,GO:0097159,GO:0098588,GO:0098805,GO:0099080,GO:0099081,GO:0099512,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901800,GO:1901970,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902494,GO:1903052,GO:1903364,GO:1903506,GO:1905368,GO:1905369,GO:1905818,GO:1905820,GO:1990904,GO:2000112,GO:2001141,GO:2001252
EggNOG free text desc.threonine-type endopeptidase activity
EggNOG OGsCOG0638@1,KOG0182@2759
EC3.4.25.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko03051
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionNucleophile aminohydrolases, N-terminal
Ec32 orthologEc-15_004060.2
Exons4
Model size384
Cds size363
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13046.2308.1prot_E-fasciculatus_F_contig13046.2308.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig13046 104..1968 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927810.0863411-CDS-E-fasciculatus_F_contig13046:103..1931622927810.0863411-CDS-E-fasciculatus_F_contig13046:103..193Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13046 104..193 -
1695995704.0626898-CDS-E-fasciculatus_F_contig13046:103..1931695995704.0626898-CDS-E-fasciculatus_F_contig13046:103..193Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13046 104..193 -
1622927810.0991616-CDS-E-fasciculatus_F_contig13046:701..8171622927810.0991616-CDS-E-fasciculatus_F_contig13046:701..817Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13046 702..817 -
1695995704.074391-CDS-E-fasciculatus_F_contig13046:701..8171695995704.074391-CDS-E-fasciculatus_F_contig13046:701..817Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13046 702..817 -
1622927810.1168046-CDS-E-fasciculatus_F_contig13046:1410..14921622927810.1168046-CDS-E-fasciculatus_F_contig13046:1410..1492Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13046 1411..1492 -
1695995704.08272-CDS-E-fasciculatus_F_contig13046:1410..14921695995704.08272-CDS-E-fasciculatus_F_contig13046:1410..1492Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13046 1411..1492 -
1622927810.1264014-CDS-E-fasciculatus_F_contig13046:1893..19681622927810.1264014-CDS-E-fasciculatus_F_contig13046:1893..1968Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13046 1894..1968 -
1695995704.091078-CDS-E-fasciculatus_F_contig13046:1893..19681695995704.091078-CDS-E-fasciculatus_F_contig13046:1893..1968Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13046 1894..1968 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927810.1361098-UTR-E-fasciculatus_F_contig13046:1968..19871622927810.1361098-UTR-E-fasciculatus_F_contig13046:1968..1987Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig13046 1969..1987 -
1695995704.1018968-UTR-E-fasciculatus_F_contig13046:1968..19871695995704.1018968-UTR-E-fasciculatus_F_contig13046:1968..1987Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig13046 1969..1987 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig13046.2308.1

>prot_E-fasciculatus_F_contig13046.2308.1 ID=prot_E-fasciculatus_F_contig13046.2308.1|Name=mRNA_E-fasciculatus_F_contig13046.2308.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=121bp
MGPGLTSVSVRGKETSVMVTQKKVPDRLIDPTSVTNIFKITDKIGCLMTG
MIADSRVLVQRLRYEAHEFRFKYGYDCPAHVLARRIADIAQVYTQQASMR
ALACVAMLIAVDDEKGPQLFK
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mRNA from alignment at E-fasciculatus_F_contig13046:104..1987-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig13046.2308.1 ID=mRNA_E-fasciculatus_F_contig13046.2308.1|Name=mRNA_E-fasciculatus_F_contig13046.2308.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1884bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13046:104..1987- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GTATGCATTCAAGGCGGCGATGGGGCCGGGCTTGACGTCAGTATCCGTGA
GGGGAAAGGAGACGAGTGTCATGGTCACCCAGAAAAAAGTCCCGGTGAGT
AGCGACACAACTACAGTAGTTATTAAGAGCATGATAACCGACATAAAATG
GCACAATATGGTGTGAGTGCTGATTTGAAAATGACTACCAGATAAAAGAA
AAGGATGTAACCGATTAACGCCCCATCCTTTTGAGGAAAAAAGTCCCGGT
GAGTAAAACTACTTCGAAGTATTTTTTATGGAACCGATATCGCACGTTCC
TCTGATATCCTTCTTGATTGCTGGGTTCCTCCGCCATGGAGATGTTGTCG
ATGGTGCTCCCTGCGGCATGGCTGAGAGCCTTCGAAATGATCCAACAGCA
GTATGCAACGTGCCGCCGCCACGTAAGGAAGCCTCCCTTCTTGTTTTCAA
CTTTTCCGTCGTGGCGTCCTCGAAAATCGCCTCCTCCTGTCCCAGGATCG
GTTGATCGACCCCACCTCGGTTACCAACATCTTCAAGATCACCGACAAGA
TCGGCTGTCTCATGACGGGCATGATCGGTGAGGACGTTATTTTGTTTTTG
GTTGTGGCGTGTACGGTACTCTGCCGCGATACAGCACCGTTCGGCCGCGC
AAGGCCCGACTGTGATATCGCCACGCCGTCGTGGCACACCCACCCGCCTG
TCGCCCCGTCCGGGCCTGCGCAGCCTGTCTCTCTGTTAGTTTTCTTCCGC
ATGTCTTCGAACGAAATGTGCCGGTTCATTGGCCTTGTTCGTGATGATAA
CGGCCAAGGCGGATGCAACTCACGCTGTCGCGAAGCTGGTGATATCGCTC
TTCGTCCGTTTTTATCGAGTGTTGGTGTGAACATCCATCGGAAACACGTA
AAACATCTCTACGATAATTTATTGGTGGGGTGTGTTTTATTTGTTTAATT
ATTTGTTTTTTGGTTTGGGGAGTGTTTTTTTGGTTTTTGGTTTTGGGGGG
GTAATATGGTAGGGCACACTGGTAGGGCATTCGAATCCCCGCACCACTTT
CTCTGCTGCTACTGCTGCTGCTACTGCTGCTGCTACTGCTGCTGCTGCTG
CTGATGACGAATTTTTACTCCGGCTGCTGCTGCTGTTGCTGCTGTTGGTG
ATGATAATGATGATGCACAGCCGACTCGAGAGTGTTGGTGCAACGGCTGC
GGTACGAGGCTCACGAGTTCCGGTTCAAGTACGGGTACGACTGCCCGGCG
CACGTGCTGGCTAGGCGCATCGCCGACATCGCGCAGGTGAAGATACCCGT
GGTCTTTTGACCACCGCTGCATGACAGCAGTGACTGCTGTATGAATGGTG
GCGGATGGGTATAGACGGTGATGATCATGGACGGTGATACAGCAGTTAAC
GCCCGCACGCACGAACCTCTATTTTGGCCGACGCTGGGATCTTACTTGCT
ACAGGGTTATGCTACAAATGGCCGCTGTAAAGTTTTTTTCGTACAGGGGT
TCGTAACCGAGATTACAAATGGTGGTCAAAGTTCTAAGGTTTTGAGTTTT
TCGAGGGTGTACGTCGATCGATATCTAACATGCCAAGTTTTTTAAGTGCT
TCACTAGCGCTAACGATGGTCTTCTGGCGCGCTTAGGTGTGGGCACGTAA
CGCGGAGCCGGTCTCCACTCAGCGGCGAGCGGGATACATTTCCCACCTTC
TTTCGTTCAACTCCCACTCGCACTCGTTTTGTGTCTTTGCTGTGACTGAC
TGCTGTATTTGTTTGCTGCGGCCATCGCCCCGATGCTCGCGCAGGTGTAC
ACGCAGCAGGCGTCCATGCGCGCCCTCGCGTGTGTAGCGATGCTGATCGC
CGTCGACGACGAGAAGGGGCCTCAGCTGTTCAAG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13046:104..1987-

>mRNA_E-fasciculatus_F_contig13046.2308.1 ID=mRNA_E-fasciculatus_F_contig13046.2308.1|Name=mRNA_E-fasciculatus_F_contig13046.2308.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=726bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13046:104..1987- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGGGCCGGGCTTGACGTCAGTATCCGTGAGGGGAAAGGAGACGAGTGT
CATGGTCACCCAGAAAAAAGTCCCGATGGGGCCGGGCTTGACGTCAGTAT
CCGTGAGGGGAAAGGAGACGAGTGTCATGGTCACCCAGAAAAAAGTCCCG
GATCGGTTGATCGACCCCACCTCGGTTACCAACATCTTCAAGATCACCGA
CAAGATCGGCTGTCTCATGACGGGCATGATCGGATCGGTTGATCGACCCC
ACCTCGGTTACCAACATCTTCAAGATCACCGACAAGATCGGCTGTCTCAT
GACGGGCATGATCGCCGACTCGAGAGTGTTGGTGCAACGGCTGCGGTACG
AGGCTCACGAGTTCCGGTTCAAGTACGGGTACGACTGCCCGGCGCACGTG
CTGGCTAGGCGCATCGCCGACATCGCGCAGCCGACTCGAGAGTGTTGGTG
CAACGGCTGCGGTACGAGGCTCACGAGTTCCGGTTCAAGTACGGGTACGA
CTGCCCGGCGCACGTGCTGGCTAGGCGCATCGCCGACATCGCGCAGGTGT
ACACGCAGCAGGCGTCCATGCGCGCCCTCGCGTGTGTAGCGATGCTGATC
GCCGTCGACGACGAGAAGGGGCCTCAGCTGTTCAAGGTGTACACGCAGCA
GGCGTCCATGCGCGCCCTCGCGTGTGTAGCGATGCTGATCGCCGTCGACG
ACGAGAAGGGGCCTCAGCTGTTCAAG
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