mRNA_E-fasciculatus_F_contig13044.2307.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13044.2307.1 vs. uniprot
Match: A0A6H5KY11_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KY11_9PHAE) HSP 1 Score: 240 bits (613), Expect = 9.150e-72 Identity = 122/128 (95.31%), Postives = 125/128 (97.66%), Query Frame = 1
Query: 301 EEEVVNIPEVKRVFREQLEETKRRALAGGGEARLERQHSRGKLSARERLDVLLDPGTFREYDMLKTHRCTDFGMENDLVPGDGVVTGRGEINGRTVFVFSQDFTVMGGSLSETHAQKICKIMDQALQV 684
EEE VNIPEVKRVFREQLEETKR ALAGGG+ARLERQHSRGKLSARERLDVLLDPG+FREYDMLKTHRCTDFGME DLVPGDGVVTGRGEINGRTVFVFSQDFTVMGGSLSETHAQKICKIMDQALQ+
Sbjct: 19 EEEAVNIPEVKRVFREQLEETKRHALAGGGDARLERQHSRGKLSARERLDVLLDPGSFREYDMLKTHRCTDFGMEKDLVPGDGVVTGRGEINGRTVFVFSQDFTVMGGSLSETHAQKICKIMDQALQL 146
BLAST of mRNA_E-fasciculatus_F_contig13044.2307.1 vs. uniprot
Match: A0A7S3HLN0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HLN0_9STRA) HSP 1 Score: 167 bits (424), Expect = 2.910e-47 Identity = 82/119 (68.91%), Postives = 97/119 (81.51%), Query Frame = 1
Query: 328 VKRVFREQLEETKRRALAGGGEARLERQHSRGKLSARERLDVLLDPGTFREYDMLKTHRCTDFGMENDLVPGDGVVTGRGEINGRTVFVFSQDFTVMGGSLSETHAQKICKIMDQALQV 684
+K FR +LE+ + AL GGG+ R++ QH RGKL+ARERL +LLD G+FREYDMLKTHRC +FGME + GDGVVTG G INGR VFVFSQDFTV GGSLSETHAQKICK+MD A++V
Sbjct: 35 IKTAFRARLEKAREAALLGGGQKRIDTQHQRGKLTARERLSLLLDDGSFREYDMLKTHRCDEFGMEKEKYYGDGVVTGHGLINGRKVFVFSQDFTVFGGSLSETHAQKICKVMDMAMRV 153
BLAST of mRNA_E-fasciculatus_F_contig13044.2307.1 vs. uniprot
Match: A0A5A7N6U8_9PROT (CoA carboxyltransferase N-terminal domain-containing protein n=1 Tax=Kordiimonadales bacterium JCM 17846 TaxID=1236968 RepID=A0A5A7N6U8_9PROT) HSP 1 Score: 161 bits (408), Expect = 1.090e-45 Identity = 81/117 (69.23%), Postives = 95/117 (81.20%), Query Frame = 1
Query: 328 VKRVFREQLEETKRRALAGGGEARLERQHSRGKLSARERLDVLLDPGTFREYDMLKTHRCTDFGMENDLVPGDGVVTGRGEINGRTVFVFSQDFTVMGGSLSETHAQKICKIMDQAL 678
+K + +E LE ++ A GGG+ R++ QH+RGKL+ARERLDVLLD G+F E DM THRCTDFGMEN VPGDGVVTG G INGR V+VFSQDFTV GG+LSETHAQKICKIMD A+
Sbjct: 1 MKEILQE-LERRRQDARLGGGQKRIDAQHARGKLTARERLDVLLDEGSFEETDMFVTHRCTDFGMENQKVPGDGVVTGSGTINGRLVYVFSQDFTVFGGALSETHAQKICKIMDMAM 116
BLAST of mRNA_E-fasciculatus_F_contig13044.2307.1 vs. uniprot
Match: A0A7S2EUD2_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EUD2_TRICV) HSP 1 Score: 161 bits (408), Expect = 2.660e-45 Identity = 81/122 (66.39%), Postives = 99/122 (81.15%), Query Frame = 1
Query: 325 EVKRVFREQLEETKRRALAGGGEARLERQHSRGKLSARERLDVLLDPGTFREYDMLKTHRCTDFGM--ENDLVPGDGVVTGRGEINGRTVFVFSQDFTVMGGSLSETHAQKICKIMDQALQV 684
E+K FR +L + R+L GGG AR++RQHSRG L+ARERLD+L D GTFRE D LK+HRC++FGM E++ +PGDGVVTGRG +NGR V+ FSQDFTV GGSLSETHAQKI K+MD AL+V
Sbjct: 8 ELKAAFRSRLASERSRSLLGGGPARVDRQHSRGSLTARERLDLLFDAGTFRETDALKSHRCSEFGMDDEHNRIPGDGVVTGRGTVNGRVVYAFSQDFTVFGGSLSETHAQKIVKVMDAALRV 129
BLAST of mRNA_E-fasciculatus_F_contig13044.2307.1 vs. uniprot
Match: A0A397AT33_9STRA (CoA carboxyltransferase N-terminal domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397AT33_9STRA) HSP 1 Score: 163 bits (412), Expect = 7.040e-45 Identity = 81/118 (68.64%), Postives = 98/118 (83.05%), Query Frame = 1
Query: 331 KRVFREQLEETKRRALAGGGEARLERQHSRGKLSARERLDVLLDPGTFREYDMLKTHRCTDFGMENDLVPGDGVVTGRGEINGRTVFVFSQDFTVMGGSLSETHAQKICKIMDQALQV 684
K F+++L+ET+ +AL GGG R E QH +GKLSARERL++LLD GTFREYDMLKTHRC DFGME PGDGVVTG G INGR +VFSQDFTV+GGSLSET+A+KI K+MD+AL++
Sbjct: 21 KLAFKKKLDETRAQALLGGGIKRQEAQHKKGKLSARERLELLLDEGTFREYDMLKTHRCKDFGMEAQQYPGDGVVTGHGLINGRLTYVFSQDFTVLGGSLSETYAEKIVKVMDKALKM 138
BLAST of mRNA_E-fasciculatus_F_contig13044.2307.1 vs. uniprot
Match: A0A7S1ZPU3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZPU3_9STRA) HSP 1 Score: 164 bits (416), Expect = 7.420e-45 Identity = 78/119 (65.55%), Postives = 97/119 (81.51%), Query Frame = 1
Query: 328 VKRVFREQLEETKRRALAGGGEARLERQHSRGKLSARERLDVLLDPGTFREYDMLKTHRCTDFGMENDLVPGDGVVTGRGEINGRTVFVFSQDFTVMGGSLSETHAQKICKIMDQALQV 684
VK FR++L + + RAL GGG +R+ +QH+RG L+ARERL +L D TFRE DMLK HRCT+FGME+ +PGDGV+TG G +NGR V+ FSQDFTV+GGSLSETHAQKICKIMD AL++
Sbjct: 70 VKAAFRQRLSQERTRALMGGGGSRISKQHTRGSLTARERLSLLFDSNTFRELDMLKAHRCTEFGMEHQDIPGDGVITGHGLVNGRIVYAFSQDFTVLGGSLSETHAQKICKIMDMALRI 188
BLAST of mRNA_E-fasciculatus_F_contig13044.2307.1 vs. uniprot
Match: A0A7S2UDV1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UDV1_9STRA) HSP 1 Score: 163 bits (412), Expect = 1.000e-44 Identity = 78/120 (65.00%), Postives = 96/120 (80.00%), Query Frame = 1
Query: 325 EVKRVFREQLEETKRRALAGGGEARLERQHSRGKLSARERLDVLLDPGTFREYDMLKTHRCTDFGMENDLVPGDGVVTGRGEINGRTVFVFSQDFTVMGGSLSETHAQKICKIMDQALQV 684
E+K FR+Q E + RA GGG R+++QH+RG L+ARERL+VL DPGTFRE DMLK HRCT+FGM PGDGVVTG G ++GR V+ FSQDFTV+GGSLSETHAQKICK+M+ A++V
Sbjct: 61 EIKAEFRKQWEAQEERAKLGGGLERIDKQHARGSLTARERLEVLFDPGTFRELDMLKAHRCTEFGMSQQHYPGDGVVTGHGRVHGRVVYAFSQDFTVLGGSLSETHAQKICKVMEMAVRV 180
BLAST of mRNA_E-fasciculatus_F_contig13044.2307.1 vs. uniprot
Match: W7T2I2_9STRA (Carboxyl transferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T2I2_9STRA) HSP 1 Score: 169 bits (427), Expect = 1.890e-44 Identity = 81/118 (68.64%), Postives = 101/118 (85.59%), Query Frame = 1
Query: 328 VKRVFREQLEETKRRALAGGGEARLERQHSRGKLSARERLDVLLDPGTFREYDMLKTHRCTDFGMENDLVPGDGVVTGRGEINGRTVFVFSQDFTVMGGSLSETHAQKICKIMDQALQ 681
+K FR +LE+ + +AL GGGE R+ +QH++GKL+ARERL +LLD GTFRE DMLKTHRCTDFGM+ ++ PGDGVVTG G I+GR V+VFSQDFTV GGSLSETHAQKICK+M++A+Q
Sbjct: 53 LKNAFRVRLEDERAKALQGGGEKRVAKQHAKGKLTARERLSLLLDEGTFRESDMLKTHRCTDFGMQKEVYPGDGVVTGWGTIDGRPVYVFSQDFTVFGGSLSETHAQKICKVMEKAMQ 170
BLAST of mRNA_E-fasciculatus_F_contig13044.2307.1 vs. uniprot
Match: A0A3D3BCA3_RHISP (Methylmalonyl-CoA carboxyltransferase (Fragment) n=1 Tax=Rhizobium sp. TaxID=391 RepID=A0A3D3BCA3_RHISP) HSP 1 Score: 157 bits (398), Expect = 2.220e-44 Identity = 77/111 (69.37%), Postives = 91/111 (81.98%), Query Frame = 1
Query: 346 EQLEETKRRALAGGGEARLERQHSRGKLSARERLDVLLDPGTFREYDMLKTHRCTDFGMENDLVPGDGVVTGRGEINGRTVFVFSQDFTVMGGSLSETHAQKICKIMDQAL 678
+QLE + A GGG+ R++ QH++GKL+ARER++VLLD G+F EYDM THRCTDFGME V GDGVVTG G INGR V+VFSQDFTV+GGSLSETHAQKICK+MD AL
Sbjct: 6 DQLEARRAEAHLGGGQRRIDAQHAKGKLTARERIEVLLDDGSFEEYDMYVTHRCTDFGMEGQKVAGDGVVTGWGTINGRQVYVFSQDFTVLGGSLSETHAQKICKVMDMAL 116
BLAST of mRNA_E-fasciculatus_F_contig13044.2307.1 vs. uniprot
Match: A0A431LZD6_9RHOO (Methylmalonyl-CoA carboxyltransferase (Fragment) n=1 Tax=Rhodocyclaceae bacterium TaxID=1898103 RepID=A0A431LZD6_9RHOO) HSP 1 Score: 163 bits (413), Expect = 2.700e-44 Identity = 76/112 (67.86%), Postives = 96/112 (85.71%), Query Frame = 1
Query: 349 QLEETKRRALAGGGEARLERQHSRGKLSARERLDVLLDPGTFREYDMLKTHRCTDFGMENDLVPGDGVVTGRGEINGRTVFVFSQDFTVMGGSLSETHAQKICKIMDQALQV 684
QL+E + RA GGG+ R++ QH++GKL+ARER+++LLDPGTF E+DM K HRCTDFGM + +PGDGVVTG G INGR VFVFSQDFTV GG+LSETHA+KICK+M++A+QV
Sbjct: 7 QLDEKRERARLGGGQKRIDSQHAKGKLTARERIELLLDPGTFEEWDMFKEHRCTDFGMADQQIPGDGVVTGYGTINGRMVFVFSQDFTVYGGALSETHAEKICKVMEKAMQV 118 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13044.2307.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13044.2307.1 >prot_E-fasciculatus_F_contig13044.2307.1 ID=prot_E-fasciculatus_F_contig13044.2307.1|Name=mRNA_E-fasciculatus_F_contig13044.2307.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=243bp MLTTRSLVALRGVSVHQTCTAALSSGRHVVHAALQASSATSTSTSTSTLNback to top mRNA from alignment at E-fasciculatus_F_contig13044:1479..3781+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13044.2307.1 ID=mRNA_E-fasciculatus_F_contig13044.2307.1|Name=mRNA_E-fasciculatus_F_contig13044.2307.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2303bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13044:1479..3781+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13044:1479..3781+ >mRNA_E-fasciculatus_F_contig13044.2307.1 ID=mRNA_E-fasciculatus_F_contig13044.2307.1|Name=mRNA_E-fasciculatus_F_contig13044.2307.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1458bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13044:1479..3781+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |