mRNA_E-fasciculatus_F_contig13038.2301.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13038.2301.1 vs. uniprot
Match: D7FS71_ECTSI (Possible kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS71_ECTSI) HSP 1 Score: 632 bits (1631), Expect = 9.660e-210 Identity = 435/605 (71.90%), Postives = 463/605 (76.53%), Query Frame = 1
Query: 1 QVRVENLPAAAQGTPGLFRVKFRAGTDGQGIAETAPKPASPDGSVEWPETLYMTVHDASVRLIAVVQQTNYLGSWSLVPDGRFEGAAVTELPNEWRHVSSIPTAPTFYAQLSVHVEEGTQGDTRLPPFAGMHKSDGGGGFRGGPVDGGGRXXXXXXXXP-SVFYPPYGRGGRG--------VAGDSTYPAG------GGWGGHAAAPQMARTGGSFSGMSASSGSIGYGSAVGSPDVYGDARGGGGDSAGGGALIDRSLS-GASSAGSGMGMLTAIAEPAFPYDAAAPPGARGRHSSMTVPSAPRVPVSMRRHQSAGFVQRESSSHSSRDGSFRFSLGAADMPSVGEAPVASGRTLDGPTSEPLPPPPPDGRLRSPVGSYAPSPLXXXXXXXXXXXLLDMSRQLEEEEEGVAPGAGQQQ--EEKRDDGFRAAFKRPSIEGDGVLWSRPGSSLAKERGETEERMEEVKTERRFAEDVEQ-----PSAAPATASTTPGSRKRIFSFARLKTSSSGSRXXXXXXXXXXXXXELQPSRRRLAAAPSTASAPDAEEKEEGKEQGKGAPSGAKKALGKLAAAVKISSRQKKAKGM--VRAPDMMPGAAPPP 1740
+VRVENLP AAQGTPGLFRVKFRAGT+G+ AET PKPA+PDGSVEW ETL +TVHD S LIAVVQQTNYLG WSLVPDGRFEGAAV+ELPNEWRH SSIPTAPTFYAQLSVHVE GTQ DTRLPPFAGM K GGGGFRGGPV G XXXXXXXX S FYP GG AG YPAG GGW GHA QMA GGSFSG+SASSGSIGYGSA GSP VYGDAR G G +A G A IDR+ S GASSAGSGM TAIAEPAFP++ A PPGARGRHSSMTVPSAPRVPVS+RRHQSAGFVQRESS+HSSRDGS+RFSLGAADMPSVGEAPV G +LDG SE PP DGRLRSPVGSYAPS XXXXXXXXXX LLDMSR+LEE + KR++GFRAA+KRPS + G S AKER ETEERMEEVKTERR EDVE +A P AST P SRKR+FSFA+L+ SSSGSR XXXXXXXXX ELQPSRRRLAA PSTASAP AEEKEEG+E+GKGAPSGAKKALGKLAAA KIS R+KK K M VRAP M AAP P
Sbjct: 9 KVRVENLPPAAQGTPGLFRVKFRAGTEGRSPAETVPKPANPDGSVEWLETLDITVHDTSFPLIAVVQQTNYLGGWSLVPDGRFEGAAVSELPNEWRHASSIPTAPTFYAQLSVHVEGGTQRDTRLPPFAGMDKPAGGGGFRGGPVGGXXXXXXXXXXXXRSDFYP----GGXXXXXXXXXXAAGGFAYPAGDGGSGWGGWVGHAPPSQMATAGGSFSGLSASSGSIGYGSAAGSPGVYGDARVGDGAAASG-APIDRTPSWGASSAGSGM--PTAIAEPAFPFEPA-PPGARGRHSSMTVPSAPRVPVSLRRHQSAGFVQRESSTHSSRDGSWRFSLGAADMPSVGEAPVVRGASLDGSESERFPPAA-DGRLRSPVGSYAPSGXXXXXXXXXXXPLLDMSRELEEXXXXXXXXXXXXXXXQVKREEGFRAAYKRPSSD---------GGSWAKERRETEERMEEVKTERRSGEDVEPYAEATAAAPPVVASTIPVSRKRMFSFAKLRGSSSGSRGSXXXXXXXXXESELQPSRRRLAAVPSTASAPLAEEKEEGREEGKGAPSGAKKALGKLAAAGKISLRKKKNKSMREVRAPAMRGAAAPAP 595
BLAST of mRNA_E-fasciculatus_F_contig13038.2301.1 vs. uniprot
Match: A0A6H5JRM4_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRM4_9PHAE) HSP 1 Score: 593 bits (1530), Expect = 2.080e-194 Identity = 405/604 (67.05%), Postives = 435/604 (72.02%), Query Frame = 1
Query: 1 QVRVENLPAAAQGTPGLFRVKFRAGTDGQGIAETAPKPASPDGSVEWPETLYMTVHDASVRLIAVVQQTNYLGSWSLVPDGRFEGAAVTELPNEWRHVSSIPTAPTFYAQLSVHVEEGTQGDTRLPPFAGMHKSDGGGGFRGGPVDGGG-RXXXXXXXXPSVFYPPYGR------------GGRGVAGDSTYPAGGGWGGHAAAPQMARTGGSFSGMSASSGSIGYGSAVGSPDVYGDARGG----GGDSAGGGALIDRSLSGASSAGSGMGMLTAIAEPAFPYDAAAPPGARGRHSSMTVPSAPRVPVSMRRHQSAGFVQRESSSHSSRDGSFRFSLGAADMPSVGEAPVASGRTLDGPTSEPLPPPPPDGRLRSPVGSYAPSPLXXXXXXXXXXXLLDMSRQLEEEEEGVAPGAGQQQEEKRDDGFRAAFKRPSIEGDGVLWSRPGSSLAKERGETEERMEEVKTERRFAEDVEQ----PSAAP-ATASTTPGSRKRIFSFARLKTSSSGSRXXXXXXXXXXXXXELQPSRRRLAAAPSTASAPDAEEKEEGKEQGKGAPSGAKKALGKLAAAVKISSRQKKAKGM--VRAPDMMPGAAPPP 1740
+VRVENLPA AQGTPGLFRVKFRAG++G+ AET PKPA PDGSVEW E L +TV+D S LIAVVQQTNYLG WSLVPDGRFEGAAV+ELPNEWRH SSIPTAPTFYAQLSVHVEEGTQ +TRLPPFAGM K GGGGFRGGPV GG R XXXXXXX S F+ P G GG G +G GG W GHA PQMAR GGSFSG+SASSGSIGYGSAVGSP+VYGDARGG GASSAGSGM TAIAEPAFP++ A PPGARGRHSSMTVPSAPRVPVSMRRHQSAGFV RESSSHSSRDGS RFSLGAADMPSVGEAPV G +LDG SEP+PP DGRL S XXXXXXXXXX LLDMSR+LEEE G APGAGQQQEEKR+DGFRAAFK PS + S AKE ETEE MEEVKTERR EDVE +AAP A A TP SRKRIF F + S GSR ELQPSRR+ AAP TAS+P AEEKEEG+++G+ APSGAKK+L LA A K+ SR+KKAKGM VRA M A PPP
Sbjct: 9 KVRVENLPATAQGTPGLFRVKFRAGSEGRAPAETVPKPADPDGSVEWLEALDITVYDTSFPLIAVVQQTNYLGGWSLVPDGRFEGAAVSELPNEWRHASSIPTAPTFYAQLSVHVEEGTQRNTRLPPFAGMDKPAGGGGFRGGPVGGGXXRFXXXXXXXRSDFFHPRGSXXXXXAAGDYYPGGDGGSGWGAGRGGGSWAGHAGTPQMARVGGSFSGLSASSGSIGYGSAVGSPEVYGDARGGWXXXXXXXXXXXXXXXXXXXGASSAGSGM--PTAIAEPAFPFEPA-PPGARGRHSSMTVPSAPRVPVSMRRHQSAGFVPRESSSHSSRDGSRRFSLGAADMPSVGEAPVVLGASLDGLESEPIPPAS-DGRLHSXXXXXXXXXXXXXXXXXXXXPLLDMSRELEEEV-GRAPGAGQQQEEKREDGFRAAFKGPSKSD---MLKPSLRSWAKETRETEEGMEEVKTERRSGEDVEPYAEATAAAPSAAAPATPVSRKRIFPFPKPMGWSRGSRGPSAAGSSSTLESELQPSRRKSEAAPPTASSPLAEEKEEGRDEGEEAPSGAKKSLRMLAVAGKLYSRKKKAKGMREVRAMPMRGAARPPP 604 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13038.2301.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13038.2301.1 >prot_E-fasciculatus_F_contig13038.2301.1 ID=prot_E-fasciculatus_F_contig13038.2301.1|Name=mRNA_E-fasciculatus_F_contig13038.2301.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=580bp QVRVENLPAAAQGTPGLFRVKFRAGTDGQGIAETAPKPASPDGSVEWPETback to top mRNA from alignment at E-fasciculatus_F_contig13038:2033..3772+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13038.2301.1 ID=mRNA_E-fasciculatus_F_contig13038.2301.1|Name=mRNA_E-fasciculatus_F_contig13038.2301.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1740bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13038:2033..3772+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13038:2033..3772+ >mRNA_E-fasciculatus_F_contig13038.2301.1 ID=mRNA_E-fasciculatus_F_contig13038.2301.1|Name=mRNA_E-fasciculatus_F_contig13038.2301.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3480bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13038:2033..3772+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |