prot_E-fasciculatus_F_contig1303.2296.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1303.2296.1
Unique Nameprot_E-fasciculatus_F_contig1303.2296.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length170
Homology
BLAST of mRNA_E-fasciculatus_F_contig1303.2296.1 vs. uniprot
Match: A0A6H5KT93_9PHAE (USP domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT93_9PHAE)

HSP 1 Score: 174 bits (442), Expect = 1.580e-50
Identity = 100/170 (58.82%), Postives = 117/170 (68.82%), Query Frame = 0
Query:    1 VLSQGIGHLADETTREEAAHGGRAAQHVRQMLEWVKAKTAQGNNEVETHTQMETSWLKTYPQTVFFYLMRFKHTRGREEKLTHRVVIPEAMDLAPYVSPPTSRG--EDPQQYDLTGVVHHIGQTTKKGHYVAFVRLPGQGWIKYDDEDVTHADERDVQTNKALILSYTRR 168
            +L +GI  LA ETTREE     RAA++VR++ E +K K AQ +N+V   ++ E SWLK  P+TV  YLMRF +T  R EKLTH V IP+ MD+APY+ PPTSR     P  YDLTGVVHHIGQTT KGHYVAFVRLPGQ W +YDD  VT        T  ALILSYTRR
Sbjct:  189 LLLEGITLLA-ETTREEPPDQ-RAAKYVRRISESLKGK-AQHDNDVGLSSREEQSWLKKCPRTVLLYLMRFAYTT-RGEKLTHDVHIPKEMDMAPYIGPPTSRAGARQPDMYDLTGVVHHIGQTTNKGHYVAFVRLPGQWWRRYDDAKVTEVVASQALTKNALILSYTRR 354          
BLAST of mRNA_E-fasciculatus_F_contig1303.2296.1 vs. uniprot
Match: D7FSR8_ECTSI (Similar to deubiquitinating enzyme 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSR8_ECTSI)

HSP 1 Score: 179 bits (455), Expect = 3.910e-49
Identity = 98/170 (57.65%), Postives = 122/170 (71.76%), Query Frame = 0
Query:    1 VLSQGIGHLADETTREEAAHGGRAAQHVRQMLEWVKAKTAQGNNEVETHTQMETSWLKTYPQTVFFYLMRFKHTRGREEKLTHRVVIPEAMDLAPYVSPPTSRG--EDPQQYDLTGVVHHIGQTTKKGHYVAFVRLPGQGWIKYDDEDVTHADERDVQTNKALILSYTRR 168
            +L +GI  LA +TTREEA +  RAA++VR++ E +K K AQ ++ V   +  E SWLK  P+TV  YLMRF +T  R EKLTH V IP+ +D+APY+ PPT+R     P  YDL GVVHHIGQTT KGHYVAFVRLPG+GW++YDD  VT   + DV+T  ALILSYTRR
Sbjct: 1258 LLLEGITLLA-QTTREEAPNQ-RAAEYVRRISESLKGK-AQHDSNVGLSSMEEQSWLKKCPRTVLLYLMRFAYTT-RGEKLTHDVYIPKEIDMAPYIGPPTTRAGARQPDMYDLNGVVHHIGQTTNKGHYVAFVRLPGEGWLRYDDAKVTGVTDSDVRTQNALILSYTRR 1423          
BLAST of mRNA_E-fasciculatus_F_contig1303.2296.1 vs. uniprot
Match: D7FYB9_ECTSI (USP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYB9_ECTSI)

HSP 1 Score: 178 bits (452), Expect = 7.220e-49
Identity = 98/170 (57.65%), Postives = 121/170 (71.18%), Query Frame = 0
Query:    1 VLSQGIGHLADETTREEAAHGGRAAQHVRQMLEWVKAKTAQGNNEVETHTQMETSWLKTYPQTVFFYLMRFKHTRGREEKLTHRVVIPEAMDLAPYVSPPTSRG--EDPQQYDLTGVVHHIGQTTKKGHYVAFVRLPGQGWIKYDDEDVTHADERDVQTNKALILSYTRR 168
            +L +GI  LA +TTREEA +  RAA++VR++ E +K K AQ ++ V   +  E SWLK  P+TV  YLMRF +T  R EKL H V IP+ +D+APY+ PPTSR     P  YDL GVVHHIGQTT KGHYVAFVRLPG+GW++YDD  VT   + DV+T  ALILSYTRR
Sbjct:  738 LLLEGITLLA-QTTREEAPNQ-RAAEYVRRISESLKGK-AQHDSNVGLSSMEEQSWLKKCPRTVLLYLMRFAYTT-RGEKLIHDVYIPKEIDMAPYIGPPTSRAGARQPDMYDLNGVVHHIGQTTNKGHYVAFVRLPGEGWLRYDDAKVTGVTDSDVRTQNALILSYTRR 903          
BLAST of mRNA_E-fasciculatus_F_contig1303.2296.1 vs. uniprot
Match: D8LK32_ECTSI (USP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK32_ECTSI)

HSP 1 Score: 155 bits (393), Expect = 2.360e-45
Identity = 89/174 (51.15%), Postives = 113/174 (64.94%), Query Frame = 0
Query:    1 VLSQGIGHLADETTREEAAHGGRAAQHVRQMLEWVKAKTAQGNNEVETHTQMETSWLKTYPQTVFFYLMRFKHTRGR----EEKLTHRVVIPEAMDLAPYVSPPTSRGEDPQ--QYDLTGVVHHIGQTTKKGHYVAFVRLPGQGWIKYDDEDVTHADERDVQTNKALILSYTRR 168
            + ++ I HLA   TRE   HG RAAQH+RQ++E +K +TAQ  + V   T  E + LK  P T+ FYL+RF+H R      E KL+H V +P+++D+APY  PP S   DPQ  +YDLTGVVHH G+TTK GHY AFV L G+ W +YDD  VT     DV T  ALIL+YTRR
Sbjct:    3 IRTEAITHLAK--TREMGDHG-RAAQHLRQVVESLK-RTAQVGD-VGRSTLEEKTSLKQCPPTILFYLIRFEHVRSGGTFVERKLSHHVDVPKSIDIAPYTRPPASSAGDPQSERYDLTGVVHHEGETTKTGHYTAFVHLAGEEWRRYDDSKVTKVGYEDVLTENALILTYTRR 171          
BLAST of mRNA_E-fasciculatus_F_contig1303.2296.1 vs. uniprot
Match: UPI0018906280 (valine--tRNA ligase, mitochondrial 1-like isoform X2 n=2 Tax=Triticum dicoccoides TaxID=85692 RepID=UPI0018906280)

HSP 1 Score: 79.3 bits (194), Expect = 4.440e-14
Identity = 39/111 (35.14%), Postives = 57/111 (51.35%), Query Frame = 0
Query:   57 LKTYPQTVFFYLMRFKHTRGREEKLTHRVVIPEAMDLAPYVSPPTSRGEDPQQYDLTGVVHHIGQTTKKGHYVAFVRLPGQGWIKYDDEDVTHADERDVQTNKALILSYTR 167
            +K  P+ +  +L RF+    R  K+T  V     +DLAP++S P    E PQ YDL GVV H+G     GHY++++R    GW  +DD  V    +      KA +L Y +
Sbjct:  318 VKKAPEVLIMHLKRFQSAGHRTSKITDMVNYQLELDLAPFMSSPD---EQPQNYDLYGVVEHVGSGKDSGHYMSYIRSSETGWFCFDDHKVWEITKEKALDTKAYLLFYVK 425          
BLAST of mRNA_E-fasciculatus_F_contig1303.2296.1 vs. uniprot
Match: UPI0018901E5F (uncharacterized protein LOC119365074 isoform X1 n=1 Tax=Triticum dicoccoides TaxID=85692 RepID=UPI0018901E5F)

HSP 1 Score: 79.3 bits (194), Expect = 4.550e-14
Identity = 39/111 (35.14%), Postives = 57/111 (51.35%), Query Frame = 0
Query:   57 LKTYPQTVFFYLMRFKHTRGREEKLTHRVVIPEAMDLAPYVSPPTSRGEDPQQYDLTGVVHHIGQTTKKGHYVAFVRLPGQGWIKYDDEDVTHADERDVQTNKALILSYTR 167
            +K  P+ +  +L RF+    R  K+T  V     +DLAP++S P    E PQ YDL GVV H+G     GHY++++R    GW  +DD  V    +      KA +L Y +
Sbjct:  318 VKKAPEVLIMHLKRFQSAGHRTSKITDMVNYQLELDLAPFMSSPD---EQPQNYDLYGVVEHVGSGKDSGHYMSYIRSSETGWFCFDDHKVWEITKEKALDTKAYLLFYVK 425          
BLAST of mRNA_E-fasciculatus_F_contig1303.2296.1 vs. uniprot
Match: A0A2K2D108_BRADI (USP domain-containing protein n=5 Tax=Brachypodium distachyon TaxID=15368 RepID=A0A2K2D108_BRADI)

HSP 1 Score: 74.3 bits (181), Expect = 2.250e-12
Identity = 42/122 (34.43%), Postives = 63/122 (51.64%), Query Frame = 0
Query:   46 VETHTQMETSWLKTYPQTVFFYLMRFKHTRGREEKLTHRVVIPEAMDLAPYVSPPTSRGEDPQQYDLTGVVHHIGQTTKKGHYVAFVRLPGQGWIKYDDEDVTHADERDVQTNKALILSYTR 167
            +E H ++E +     P+ +   L RF++      K+   V     +DL P++S P  +   PQ YDL GVV H+G T  KGHYV F+R   + W  ++D+ V    E  V  NKA +L Y +
Sbjct:  315 MEKHFKVEQA-----PEVLVIQLKRFQNLESCTSKIEDMVNYQLELDLKPFMSSPDDK---PQNYDLYGVVEHLG-TPSKGHYVCFIRSSQKDWFFFNDDKVVKWSEDGVLDNKAYLLFYVK 427          
BLAST of mRNA_E-fasciculatus_F_contig1303.2296.1 vs. uniprot
Match: W7LHK3_GIBM7 (Ubiquitin carboxyl-terminal hydrolase n=83 Tax=Fusarium TaxID=5506 RepID=W7LHK3_GIBM7)

HSP 1 Score: 72.8 bits (177), Expect = 7.740e-12
Identity = 41/103 (39.81%), Postives = 59/103 (57.28%), Query Frame = 0
Query:   57 LKTYPQTVFFYLMRFKHTR--GREEKLTHRVVIPEAMDLAPYVSPPTSRGEDPQQ-YDLTGVVHHIGQTTKKGHYVAFVRLPGQGWIKYDDEDVTHADERDVQ 156
            +K  P+ +  +L RFK+T    R +KL HRVV P  + +       T   EDP + Y+L  VV HIG     GHYV+ +++PG+GWI +DDE V   D+  V+
Sbjct:  368 VKRLPKILTLHLKRFKYTEDYSRLQKLFHRVVYPYHLRMFNT----TDNAEDPDRLYELYAVVVHIGGNAYHGHYVSIIKVPGRGWILFDDEMVEPVDKNFVR 466          
BLAST of mRNA_E-fasciculatus_F_contig1303.2296.1 vs. uniprot
Match: A0A559LCJ1_FUSOX (Ubiquitin carboxyl-terminal hydrolase n=13 Tax=Fusarium TaxID=5506 RepID=A0A559LCJ1_FUSOX)

HSP 1 Score: 72.8 bits (177), Expect = 7.740e-12
Identity = 41/103 (39.81%), Postives = 59/103 (57.28%), Query Frame = 0
Query:   57 LKTYPQTVFFYLMRFKHTR--GREEKLTHRVVIPEAMDLAPYVSPPTSRGEDPQQ-YDLTGVVHHIGQTTKKGHYVAFVRLPGQGWIKYDDEDVTHADERDVQ 156
            +K  P+ +  +L RFK+T    R +KL HRVV P  + +       T   EDP + Y+L  VV HIG     GHYV+ +++PG+GWI +DDE V   D+  V+
Sbjct:  368 VKRLPKILTLHLKRFKYTEDYSRLQKLFHRVVYPYHLRMFNT----TDNAEDPDRLYELYAVVVHIGGNAYHGHYVSIIKVPGRGWILFDDEMVEPVDKNFVR 466          
BLAST of mRNA_E-fasciculatus_F_contig1303.2296.1 vs. uniprot
Match: A0A8H4U126_9HYPO (USP domain-containing protein n=1 Tax=Fusarium zealandicum TaxID=1053134 RepID=A0A8H4U126_9HYPO)

HSP 1 Score: 70.9 bits (172), Expect = 3.180e-11
Identity = 38/102 (37.25%), Postives = 58/102 (56.86%), Query Frame = 0
Query:   57 LKTYPQTVFFYLMRFKHTR--GREEKLTHRVVIPEAMDLAPYVSPPTSRGEDPQQYDLTGVVHHIGQTTKKGHYVAFVRLPGQGWIKYDDEDVTHADERDVQ 156
            +K  P+ +  +L RFK+T    R +KL HRVV P  + +    +     G+  + Y+L  VV HIG     GHYV+ V++PG+GW+ +DDE V   D+  V+
Sbjct:   84 VKRLPKILTLHLKRFKYTEDYSRLQKLFHRVVYPYHLRM---FNTTDDAGDPDRLYELYAVVVHIGGNAYHGHYVSIVKVPGRGWVLFDDEMVEPVDKNFVR 182          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1303.2296.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KT93_9PHAE1.580e-5058.82USP domain-containing protein n=2 Tax=Ectocarpus s... [more]
D7FSR8_ECTSI3.910e-4957.65Similar to deubiquitinating enzyme 3 n=1 Tax=Ectoc... [more]
D7FYB9_ECTSI7.220e-4957.65USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LK32_ECTSI2.360e-4551.15USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
UPI00189062804.440e-1435.14valine--tRNA ligase, mitochondrial 1-like isoform ... [more]
UPI0018901E5F4.550e-1435.14uncharacterized protein LOC119365074 isoform X1 n=... [more]
A0A2K2D108_BRADI2.250e-1234.43USP domain-containing protein n=5 Tax=Brachypodium... [more]
W7LHK3_GIBM77.740e-1239.81Ubiquitin carboxyl-terminal hydrolase n=83 Tax=Fus... [more]
A0A559LCJ1_FUSOX7.740e-1239.81Ubiquitin carboxyl-terminal hydrolase n=13 Tax=Fus... [more]
A0A8H4U126_9HYPO3.180e-1137.25USP domain-containing protein n=1 Tax=Fusarium zea... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 54..165
e-value: 2.9E-22
score: 79.4
NoneNo IPR availableGENE3D3.90.70.10coord: 24..169
e-value: 5.5E-31
score: 110.1
NoneNo IPR availablePANTHERPTHR21646FAMILY NOT NAMEDcoord: 51..168
IPR018200Ubiquitin specific protease, conserved sitePROSITEPS00973USP_2coord: 110..128
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 1..168
score: 20.448
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 50..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1303contigE-fasciculatus_F_contig1303:12824..14360 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1303.2296.1mRNA_E-fasciculatus_F_contig1303.2296.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1303 12824..14360 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1303.2296.1 ID=prot_E-fasciculatus_F_contig1303.2296.1|Name=mRNA_E-fasciculatus_F_contig1303.2296.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=170bp
VLSQGIGHLADETTREEAAHGGRAAQHVRQMLEWVKAKTAQGNNEVETHT
QMETSWLKTYPQTVFFYLMRFKHTRGREEKLTHRVVIPEAMDLAPYVSPP
TSRGEDPQQYDLTGVVHHIGQTTKKGHYVAFVRLPGQGWIKYDDEDVTHA
DERDVQTNKALILSYTRRR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038765Papain-like_cys_pep_sf
IPR028889USP_dom
IPR018200USP_CS
IPR001394Peptidase_C19_UCH