prot_E-fasciculatus_F_contig13028.2294.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13028.2294.1
Unique Nameprot_E-fasciculatus_F_contig13028.2294.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length56
Homology
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BLAST of mRNA_E-fasciculatus_F_contig13028.2294.1 vs. uniprot
Match: D7G547_ECTSI (GYF_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G547_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 5.220e-13
Identity = 32/56 (57.14%), Postives = 38/56 (67.86%), Query Frame = 0 
Query:    1 MEEEWHYFDDTTNTQPRPFSVNELGKLYGASSVTASTLVWRDGLEDWSPLWALRSL 56
            M E W+Y DD TN Q  P ++ EL +LY +SSVT STL W+DG  DWS L AL SL
Sbjct:    1 MAEAWYYVDDATNAQQGPCTIPELERLYASSSVTDSTLFWKDGQADWSALSALPSL 56
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BLAST of mRNA_E-fasciculatus_F_contig13028.2294.1 vs. uniprot
Match: A0A653LZW0_9GAMM (Uncharacterized protein n=1 Tax=Luteimonas sp. 9C TaxID=2653148 RepID=A0A653LZW0_9GAMM)

HSP 1 Score: 47.8 bits (112), Expect = 8.520e-5
Identity = 24/50 (48.00%), Postives = 32/50 (64.00%), Query Frame = 0 
Query:    4 EWHYFDDTTNTQPRPFSVNELGKLYGASSVTASTLVWRDGLEDWSPLWAL 53
            EW Y+ DTTNT+  P +   L +L    ++   TL+WRDGLE W+PL AL
Sbjct:    3 EW-YYADTTNTRQGPITTPALLQLRQQGTLGDDTLLWRDGLEAWTPLRAL 51
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13028.2294.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G547_ECTSI5.220e-1357.14GYF_2 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A653LZW0_9GAMM8.520e-548.00Uncharacterized protein n=1 Tax=Luteimonas sp. 9C ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025640GYF domain 2PFAMPF14237GYF_2coord: 5..56
e-value: 2.6E-12
score: 46.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13028contigE-fasciculatus_F_contig13028:3323..3490 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13028.2294.1mRNA_E-fasciculatus_F_contig13028.2294.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13028 3323..3490 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13028.2294.1 ID=prot_E-fasciculatus_F_contig13028.2294.1|Name=mRNA_E-fasciculatus_F_contig13028.2294.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=56bp
MEEEWHYFDDTTNTQPRPFSVNELGKLYGASSVTASTLVWRDGLEDWSPL
WALRSL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025640GYF_2