prot_E-fasciculatus_F_contig13027.2293.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13027.2293.1
Unique Nameprot_E-fasciculatus_F_contig13027.2293.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length62
Homology
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BLAST of mRNA_E-fasciculatus_F_contig13027.2293.1 vs. uniprot
Match: D7FWJ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWJ7_ECTSI)

HSP 1 Score: 102 bits (254), Expect = 2.110e-27
Identity = 49/61 (80.33%), Postives = 54/61 (88.52%), Query Frame = 0 
Query:    1 MGGEDITFDSATRDVLISTAKLIGSTCVDENLAFTKCKAENSDPEACLKLGHAVLACNNKV 61
            MG ED+ F SATRDVLISTAKL+GS+CVDENLAFTKCKAENSDPEAC+KLG AVL C +K 
Sbjct:    1 MGEEDMPFPSATRDVLISTAKLLGSSCVDENLAFTKCKAENSDPEACMKLGVAVLECTSKA 61
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BLAST of mRNA_E-fasciculatus_F_contig13027.2293.1 vs. uniprot
Match: A0A6L2NXU0_TANCI (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2NXU0_TANCI)

HSP 1 Score: 47.8 bits (112), Expect = 2.020e-5
Identity = 22/46 (47.83%), Postives = 30/46 (65.22%), Query Frame = 0 
Query:   12 TRDVLISTAKLIGSTCVDENLAFTKCKAENSDPEACLKLGHAVLAC 57
            T  VL+S +K I + C  EN+AF KCK ++S+PE CL+ G  V  C
Sbjct:   11 TSAVLMSASKHIATRCRGENVAFLKCKKDDSNPEKCLEKGRQVTRC 56
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13027.2293.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FWJ7_ECTSI2.110e-2780.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6L2NXU0_TANCI2.020e-547.83NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016680NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 8PANTHERPTHR13344NADH-UBIQUINONE OXIDOREDUCTASEcoord: 10..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13027contigE-fasciculatus_F_contig13027:926..1596 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13027.2293.1mRNA_E-fasciculatus_F_contig13027.2293.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13027 926..1596 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13027.2293.1 ID=prot_E-fasciculatus_F_contig13027.2293.1|Name=mRNA_E-fasciculatus_F_contig13027.2293.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=62bp
MGGEDITFDSATRDVLISTAKLIGSTCVDENLAFTKCKAENSDPEACLKL
GHAVLACNNKV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016680NDUFA8