prot_E-fasciculatus_F_contig13022.2291.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13022.2291.1
Unique Nameprot_E-fasciculatus_F_contig13022.2291.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length177
Homology
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BLAST of mRNA_E-fasciculatus_F_contig13022.2291.1 vs. uniprot
Match: D7FUL8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUL8_ECTSI)

HSP 1 Score: 173 bits (438), Expect = 9.390e-52
Identity = 85/104 (81.73%), Postives = 92/104 (88.46%), Query Frame = 0 
Query:   10 QAFSKMRRVPRVIGSSRVIWSCIIVAVGLALLSASFWKDIYVTGSYFWVTNTKDPRLSRWISLSFVTTQGFAGVLMALALLFVVTGERRKSLLVCIRTSKRMKL 113
            QAFSKMRRVPRVIGSSRVIWSC+ VA+GL LLSA FW D+ VTGSYFW+TN  DP L+RWISLSFVTTQG AG LMAL L+FV TG+RRKSLLVCIRTSKRMKL
Sbjct:   69 QAFSKMRRVPRVIGSSRVIWSCVFVAMGLTLLSAPFWNDVLVTGSYFWITNRNDPNLARWISLSFVTTQGIAGALMALTLVFVATGKRRKSLLVCIRTSKRMKL 172
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BLAST of mRNA_E-fasciculatus_F_contig13022.2291.1 vs. uniprot
Match: D7FUL6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUL6_ECTSI)

HSP 1 Score: 176 bits (446), Expect = 5.300e-51
Identity = 87/161 (54.04%), Postives = 119/161 (73.91%), Query Frame = 0 
Query:   10 QAFSKMRRVPRVIGSSRVIWSCIIVAVGLALLSASFWKDIYVTGSYFWVTNTKDPRLSRWISLSFVTTQGFAGVLMALALLFVVTGERRKSLLVCIRTSKRMKLYSILSAFGTCVYLYNGFVLLFDELSRLGSAKKELTMVGWCSKYLHVVAETLVLYYAF 170
            Q+F K+RRVP +IGS+R    C+++A+   +LSA FW  + +TG YFWVTNT +    RWISLSF  TQ  AG+LMALA+LF V+GER  SL VC +TS+R+K + IL+ FGT VYLYNG VL+FDE S    +K+ L ++GWCS+Y+HV+A+T +++ AF
Sbjct:   94 QSFVKLRRVPTMIGSTRAACVCLVLAILATVLSAVFWNGVLITGGYFWVTNTGNESHGRWISLSFGATQTVAGMLMALAVLFTVSGERFSSLKVCCKTSQRVKFHFILTIFGTFVYLYNGIVLMFDEFSDFKISKR-LVIIGWCSRYVHVIADTGIIFGAF 253
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13022.2291.1 vs. uniprot
Match: A0A6H5JRD9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRD9_9PHAE)

HSP 1 Score: 172 bits (435), Expect = 3.860e-49
Identity = 85/161 (52.80%), Postives = 115/161 (71.43%), Query Frame = 0 
Query:   10 QAFSKMRRVPRVIGSSRVIWSCIIVAVGLALLSASFWKDIYVTGSYFWVTNTKDPRLSRWISLSFVTTQGFAGVLMALALLFVVTGERRKSLLVCIRTSKRMKLYSILSAFGTCVYLYNGFVLLFDELSRLGSAKKELTMVGWCSKYLHVVAETLVLYYAF 170
            Q+F  +RRVP +IGS+R    C+++AV   +LSA FW  + +TG YFWVTNT +    RWISLSF  TQ  AG+LMAL +LF +TGER  SL VC +TS+R+K + IL+ FGT VYLYNG VL+FDE S    + + L ++GWCS+Y HV+A+T +++ AF
Sbjct:   94 QSFVTLRRVPTMIGSTRAACVCVVLAVLATVLSAVFWNGVLITGGYFWVTNTSNESHGRWISLSFGATQTVAGILMALTVLFTMTGERFSSLRVCCKTSQRVKFHFILTIFGTFVYLYNGIVLMFDEFSDFKISTR-LVIIGWCSRYAHVIADTGIIFGAF 253
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13022.2291.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FUL8_ECTSI9.390e-5281.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FUL6_ECTSI5.300e-5154.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JRD9_9PHAE3.860e-4952.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 93..112
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 171..176
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 47..65
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 113..134
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 135..148
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..46
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 149..170
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 66..92
NoneNo IPR availableTMHMMTMhelixcoord: 70..92
NoneNo IPR availableTMHMMTMhelixcoord: 148..170
NoneNo IPR availableTMHMMTMhelixcoord: 113..133
NoneNo IPR availableTMHMMTMhelixcoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13022contigE-fasciculatus_F_contig13022:1..3356 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13022.2291.1mRNA_E-fasciculatus_F_contig13022.2291.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13022 1..3356 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13022.2291.1 ID=prot_E-fasciculatus_F_contig13022.2291.1|Name=mRNA_E-fasciculatus_F_contig13022.2291.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=177bp
VLLLGRYLSQAFSKMRRVPRVIGSSRVIWSCIIVAVGLALLSASFWKDIY
VTGSYFWVTNTKDPRLSRWISLSFVTTQGFAGVLMALALLFVVTGERRKS
LLVCIRTSKRMKLYSILSAFGTCVYLYNGFVLLFDELSRLGSAKKELTMV
GWCSKYLHVVAETLVLYYAFQVHFGF*
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