mRNA_E-fasciculatus_F_contig1301.2286.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1301.2286.1 vs. uniprot
Match: D7G1L2_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L2_ECTSI) HSP 1 Score: 619 bits (1596), Expect = 3.290e-214 Identity = 389/588 (66.16%), Postives = 434/588 (73.81%), Query Frame = 1
Query: 25 EQKEDAPVPPTSPPPVLLPQPQPDEGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGSPNQRQEAVGERVPSPEHGSSSPEKAEEMDQGFRTQLSSSAGLDSLIRENPEALQDIQRVMEAQVAGSFHPDDELSSMEGRRKLGTLVTMSTALGEVALRHTADMNIQRKELALAPFRNAYYTAVRTGLCNAYLAASVIGSDWVATSKTGGTGKAGAALNLMSSAVPVIGGLTGLTGKALQAGDHYLQTRRLVKITAMAPDAVECCSLARRLALELADGLRNDASATTDVTDQVRVDTTAGMTSGSGSGRGADMLPGDMSEEDVFEYLLEEVASYESNDRGGKRLGKRHLRKLLNAIQRGCLDDSTSIEQKIEVLLLEVLPEADVRPAAMPHTPKEVIVRSPPVVAPAQDSGLPSMADFAALQAALDALKLDRETQXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------RQVQKLAKHVPELDIEPDGDADCGGGLALRRRVAVTETAEGFLDRARDRAAAAADHHPVTVSQQREFEALQDEKHRDHEARLTELEGEISKATKGKG 1725
+++EDAP P TSPPPVLLPQ Q XXXXXXXXXXX PN R+ V ERV SPEH S SP KAEE+D R Q SSSAGL LIRENPEAL+DIQRV+EA S HPDDELS ++ RR LGTLVTMSTALGEVAL+HT DM+++RKELAL PF YY+AVR+GLC AYLAASVI S+WV+TSKTGG GK GAAL LMS AVP+IGGL L GKAL+AGD YLQTRRLVKITAMAPD VECCSLARRLAL+L DGLRN+ASAT D +QV V+TTAG GSG GRGADM+PGDMSEEDVF+YLLEEV +YE ND GGKRLGK+HLRKLL AIQ GCLD S QKI++LLLE+LPEAD +PAA P TPKEV+VRSPP A A DSGLPS A+FAA+QA L ALK ++ Q XXXXX XXXXXXXX R+V+KL +HVPELD EPD D D GG LALRRRVAV+ETA+GFLDRARDRAA AADHHPVTVS+QREFEALQ+EKHR+HEARL ELEG+ISKAT KG
Sbjct: 94 KKEEDAPAPRTSPPPVLLPQQQ--------------------------QIDAXXXXXXXXXXXXXXPNSREVVVEERVRSPEHASLSPGKAEEVDPMVRAQFSSSAGLGPLIRENPEALEDIQRVIEATTVRSIHPDDELSDIQSRRNLGTLVTMSTALGEVALKHTEDMSVRRKELALPPFSKEYYSAVRSGLCQAYLAASVIDSNWVSTSKTGGMGKVGAALKLMSGAVPLIGGLPKLAGKALEAGDTYLQTRRLVKITAMAPDTVECCSLARRLALQLTDGLRNNASATDDDNNQVWVNTTAG---GSGCGRGADMMPGDMSEEDVFKYLLEEVTAYERNDHGGKRLGKKHLRKLLKAIQGGCLDGSNGTVQKIKILLLEILPEADDKPAATPGTPKEVMVRSPPAGAAAHDSGLPSRAEFAAIQAELAALKSAKDKQQAELEEXXXXXVAVESVXXXXXXXXEALKSGRRXXXXXXXXXXXXXXXLERKVKKLEEHVPELDSEPDDDVDFGGELALRRRVAVSETAKGFLDRARDRAARAADHHPVTVSEQREFEALQNEKHREHEARLRELEGQISKATIRKG 652
BLAST of mRNA_E-fasciculatus_F_contig1301.2286.1 vs. uniprot
Match: D7FHA3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHA3_ECTSI) HSP 1 Score: 624 bits (1610), Expect = 1.500e-213 Identity = 388/593 (65.43%), Postives = 429/593 (72.34%), Query Frame = 1
Query: 4 KPPTLKVEQK-EDAPVPPTSPPPVLLPQPQP-DEGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGSPNQRQEAVGERVPSPEHGSSSPEKAEEMDQGFRTQLSSSAGLDSLIRENPEALQDIQRVMEAQVAGSFHPDDELSSMEGRRKLGTLVTMSTALGEVALRHTADMNIQRKELALAPFRNAYYTAVRTGLCNAYLAASVIGSDWVATSKTGGTGKAGAALNLMSSAVPVIGGLTGLTGKALQAGDHYLQTRRLVKITAMAPDAVECCSLARRLALELADGLRNDASATTDVTDQVRVDTTAGMTSGSGSGRGADMLPGDMSEEDVFEYLLEEVASYESNDRGGKRLGKRHLRKLLNAIQRGCLDDSTSIEQKIEVLLLEVLPEADVRPAAMPHTPKEVIVRSPPVVAPAQDSGLPSMADFAALQAALDALKLDRETQXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------RQVQKLAKHVPELDIEPDGDADCGGGLALRRRVAVTETAEGFLDRARDRAAAAADHHPVTVSQQREFEALQDEKHRDHEARLTELEGEISKAT 1713
KP TLK +Q+ +DAPVPP P VLLPQ Q D G+E L SPNQRQE V S S+SPEKAEE+D+ FR QL SSAGLDSLIRENP AL++IQ +E QVAGSF+PD+EL M+ RR LGTLVTMSTALGEVALRHT DMN+QRKELAL PF AYYTA+RTGLC AYLAAS I SDWV TSKTGG GK GAAL LMSSAVP+IGGL L GKAL+AGD YLQTRRLVKITAMAPD VECCSLARRLAL+L DGLRN+ASAT D +QV V+TTAG GSG GRGADM+PGDMSEEDVF+YLLEEV + E ND GGKRLGKRHLRKLL AIQ GCLD S QKI++LLLE+LPEAD +PAA P TPKEV+VRSPP A A DSGLPS A+FAA+QA L ALK ++ Q XXXXX XXXXXXXX R+V+KL +HVPELD EPD D D GG LALRRRVAV+ETA+GFLDRARDRAA A DHHPVTVS+QREFEALQDEKHR+HEARL ELEG+I KAT
Sbjct: 281 KPRTLKGDQRGKDAPVPPPXAPTVLLPQQQQIDAGDETEEDAPVL---------------------------LDSPNQRQEVVAGSANSTGRASTSPEKAEEVDRLFRAQLVSSAGLDSLIRENPAALENIQLAIERQVAGSFYPDNELGDMQSRRNLGTLVTMSTALGEVALRHTEDMNVQRKELALPPFSKAYYTAIRTGLCKAYLAASAIDSDWVITSKTGGMGKVGAALKLMSSAVPLIGGLPKLAGKALEAGDTYLQTRRLVKITAMAPDTVECCSLARRLALQLTDGLRNNASATDDDNNQVWVNTTAG---GSGCGRGADMMPGDMSEEDVFKYLLEEVTADERNDHGGKRLGKRHLRKLLKAIQGGCLDGSNGTVQKIKILLLEILPEADDKPAATPGTPKEVMVRSPPAGAAAHDSGLPSRAEFAAIQAELAALKSAKDKQQAELEEXXXXXVAVESVXXXXXXXXEALKSGRRXXXXXXXXXXXXXXELERKVKKLEQHVPELDSEPDDDVDFGGELALRRRVAVSETAKGFLDRARDRAARAVDHHPVTVSEQREFEALQDEKHREHEARLRELEGQIIKAT 843
BLAST of mRNA_E-fasciculatus_F_contig1301.2286.1 vs. uniprot
Match: D7FH90_ECTSI (Putative Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH90_ECTSI) HSP 1 Score: 526 bits (1355), Expect = 3.310e-175 Identity = 327/459 (71.24%), Postives = 361/459 (78.65%), Query Frame = 1
Query: 214 LGSPNQRQEAVGERVPSPEHGSSSPEKAEEMDQGFRTQLSSSAGLDSLIRENPEALQDIQRVMEAQVAGSFHPDDELSSMEGRRKLGTLVTMSTALGEVALRHTADMNIQRKELALAPFRNAYYTAVRTGLCNAYLAASVIGSDWVATSKTGGTGKAGAALNLMSSAVPVIGGLTGLTGKALQAGDHYLQTRRLVKITAMAPDAVECCSLARRLALELADGLRNDASATTDVTDQVRVDTTAGMTSGSGSGRGADMLPGDMSEEDVFEYLLEEVASYESNDRGGKRLGKRHLRKLLNAIQRGCLDDSTSIEQKIEVLLLEVLPEADVRPAAMPHTPKEVIVRSPPVVAPAQDSGLPSMADFAALQAALDALKLDRETQXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------RQVQKLAKHVPELDIEPDGDADCGGGLALRRRVAVTETAEGFLDR 1569
LG PNQR+EAV ER SPE S SP KAEEMD+ F QLSSSAGLDSLIRE P+AL+DIQRV+E+ VAGS PDD+LS ++GRRKLGTLVTMSTALGEVALRHT DMNIQRKELAL F NAYY+AVR+GLC AYLAASVI SDWV+TSKTGG GKAGAA+ LMSSAVPV+GGL L GKAL+AGDHYLQTRRLVKITAMA DAV+CC LARRLAL+L DGLRNDA AT D D+VRVDTTAGM G ADM PGDMSEEDVFEYLLEEVASY+ ND GG RLGK+HLRKLL AIQRG LD S EQKIEVL+L++LPEAD AA TPKEVIVRSPPVV PA D GLPS A+F A+QAAL+ALK DRETQ XXXXXXXXXXXXXXXXXXXXXXXXX +V + K VPE D EP + G L++++ + E E F R
Sbjct: 376 LGFPNQREEAVWERARSPERASLSPGKAEEMDRLFSAQLSSSAGLDSLIREKPKALEDIQRVIESTVAGSVSPDDKLSDIDGRRKLGTLVTMSTALGEVALRHTEDMNIQRKELALPAFSNAYYSAVRSGLCQAYLAASVIDSDWVSTSKTGGMGKAGAAMKLMSSAVPVVGGLPELAGKALEAGDHYLQTRRLVKITAMASDAVDCCFLARRLALQLTDGLRNDAGATADNADEVRVDTTAGMNGG------ADMTPGDMSEEDVFEYLLEEVASYKRNDHGGVRLGKKHLRKLLKAIQRGSLDGSNGTEQKIEVLVLKILPEADTSLAATLSTPKEVIVRSPPVVTPAHDGGLPSRAEFTAMQAALEALKFDRETQQXXXXXXXXXXXXXXXXXXXXXXXXXAVESRNKQLREKVAAMEKRVPEGDCEPCDRGNAEGRQVLQQKLEMKEDLETFWQR 828
BLAST of mRNA_E-fasciculatus_F_contig1301.2286.1 vs. uniprot
Match: D7FH89_ECTSI (Putative Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH89_ECTSI) HSP 1 Score: 523 bits (1346), Expect = 2.260e-170 Identity = 360/697 (51.65%), Postives = 409/697 (58.68%), Query Frame = 1
Query: 214 LGSPNQRQEAVGERVPSPEHGSSSPEKAEEMDQGFRTQLSSSAGLDSLIRENPEALQDIQRVMEAQVAGSFHPDDELSSMEGRRKLGTLVTMSTALGEVALRHTADMNIQRKELALAPFRNAYYTAVRTGLCNAYLAASVIGSDWVATSKTGGTGKAGAALNLMSSAVPVIGGLTGLTGKALQAGDHYLQTRRLVKITAMAPDAVECCSLARRLALELADGLRNDASATTDVTDQVRVDTTAGMTSGSGSGRGADMLPGDMSEEDVFEYLLEEVASYESNDRGGKRLGKRHLRKLLNAIQRGCLDDSTSIEQKIEVLLLEVLPEADVRPAAMPHTPKEVIVRSPPVVAPAQDSGLPSMADFAALQAALDALKLDRETQXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RQVQKLAKHVPELDIEPDGDADCGGGLALRRRVAVTETAEGFLDRARDRAAAAADHHPVTVSQQREFEALQDEKHRDHEARLTELEGEISKATK 1716
L SP RQ AVG RV SPE+ S SP KA E+D+ FR QLSSSAGLDSLI+ENPEAL+DIQRV++A AG F+ DDELS ME RRKLG L+ M+ ALGEVAL HT D ++QRKELALAPF AYYTAVR+GLCNAYLAASVI SDWV+TSKTGG GK G AL L+SSAVPVI GL GL GKAL+ GDHYLQTRRL KITAMA D +ECCSLARRLAL+L DGL++D D TDQV TTAGM GSGSGR AD+LP + E+DVFE+LLEEVA YE +D GGKRLGK+HLRKLL AIQRGCLD S+ I+QK+E+LLLE+LPEAD+R + +PKEVIV+SPP +AP + LPSMAD AALQAA++AL ++ Q XXXXXXXXXXXXXXXXXXXXXXXXX R+V+KL KH ELD EPD D D GGGLA+R+RVAVTETA+GF DRARDRA AADHHPVTV++QREFEALQ+EKH HEARL ELEGEISKATK
Sbjct: 443 LVSPTHRQAAVGGRVRSPENASLSPGKAAEVDRLFRVQLSSSAGLDSLIKENPEALEDIQRVIKAPAAGGFYFDDELSDMERRRKLGALMNMAKALGEVALSHTEDKDVQRKELALAPFSKAYYTAVRSGLCNAYLAASVIDSDWVSTSKTGGMGKGGTALVLLSSAVPVISGLAGLAGKALRTGDHYLQTRRLAKITAMAADTMECCSLARRLALQLTDGLKDDTGMMDDETDQVCTHTTAGMNGGSGSGRDADILPDIIIEDDVFEHLLEEVARYERSDHGGKRLGKKHLRKLLKAIQRGCLDGSSGIKQKMELLLLEILPEADIRTSETSISPKEVIVQSPPALAPTHNGTLPSMADIAALQAAVEALTSAKDMQRAELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKVKKLEKHASELDSEPDDDVDYGGGLAVRQRVAVTETAQGFFDRARDRATTAADHHPVTVAEQREFEALQNEKHCGHEARLRELEGEISKATK 1139
BLAST of mRNA_E-fasciculatus_F_contig1301.2286.1 vs. uniprot
Match: D7FHA2_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHA2_ECTSI) HSP 1 Score: 484 bits (1245), Expect = 3.260e-160 Identity = 269/385 (69.87%), Postives = 307/385 (79.74%), Query Frame = 1
Query: 217 GSPNQRQEAVGERVPSPEHGSSSPEKAEEMDQGFRTQLSSSAGLDSLIRENPEALQDIQRVMEAQVAGSFHPDDELSSMEGRRKLGTLVTMSTALGEVALRHTADMNIQRKELALAPFRNAYYTAVRTGLCNAYLAASVIGSDWVATSKTGGTGKAGAALNLMSSAVPVIGGLTGLTGKALQAGDHYLQTRRLVKITAMAPDAVECCSLARRLALELADGLRNDASATTDVTDQVRVDTTAGMTSGSGSGRGADMLPGDMSEEDVFEYLLEEVASYESNDRGGKRLGKRHLRKLLNAIQRGCLDDSTSIEQK----------IEVLLLEVLPEADVRPAAMPHTPKEVIVRSPPVVAPAQDSGLPSMADFAALQAALDALKLDRE 1341
GS N R EAVGERV SPEH S SPEKAEE D+ F+ QLSSSAGLDSLIRENP AL+DIQRV+EA VAGS D+ELS M+ RRKLGTLVTMSTALGEV L+HT DM+++R+EL L PF AYYTAVRTG+CNAYLAASVI SDWV+TSKTGG GKAGAAL +MS A+PV+GG TGL GKA+++GDHYLQTRRLVKITAMA DA+ECCSLARRLAL+LA GLRNDA+A + D +R D TAGM GSGSG+G + LP MSE DVFEY+L+EVAS ND GGKRLGK+HLRKLL A+QRGCLD + EQK + VLLLE+LPEAD+R AA KEVIV+S PVV A DSG PSMADFAALQAA++ LK D +
Sbjct: 289 GSRNGRHEAVGERVRSPEHASLSPEKAEEADRVFKAQLSSSAGLDSLIRENPGALEDIQRVIEASVAGSVSVDNELSDMQSRRKLGTLVTMSTALGEVVLKHTEDMDVKREELTLPPFSKAYYTAVRTGICNAYLAASVIDSDWVSTSKTGGMGKAGAALKVMSRAIPVVGGPTGLAGKAMKSGDHYLQTRRLVKITAMAHDAIECCSLARRLALQLAGGLRNDANAGANEVDHIRADITAGMNGGSGSGQGPNSLPAIMSEGDVFEYVLKEVASCGHNDHGGKRLGKKHLRKLLKAVQRGCLDGLSCTEQKARTRMSSRQQMAVLLLEILPEADIRHAATSSLLKEVIVKSLPVVGAAHDSGSPSMADFAALQAAVEELKSDNK 673
BLAST of mRNA_E-fasciculatus_F_contig1301.2286.1 vs. uniprot
Match: A0A6H5KZF6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZF6_9PHAE) HSP 1 Score: 483 bits (1244), Expect = 1.130e-154 Identity = 265/378 (70.11%), Postives = 299/378 (79.10%), Query Frame = 1
Query: 214 LGSPNQRQEAVGERVPSPEHGSSSPEKAEEMDQGFRTQLSSSAGLDSLIRENPEALQDIQRVMEAQVAGSFHPDDELSSMEGRRKLGTLVTMSTALGEVALRHTADMNIQRKELALAPFRNAYYTAVRTGLCNAYLAASVIGSDWVATSKTGGTGKAGAALNLMSSAVPVIGGLTGLTGKALQAGDHYLQTRRLVKITAMAPDAVECCSLARRLALELADGLRNDASATTDVTDQVRVDTTAGMTSGSGSGRGADMLPGDMSEEDVFEYLLEEVASYESNDRGGKRLGKRHLRKLLNAIQRGCLDDSTSIEQKIEVLLLEVLPEADVRPAAMPHTPKEVIVRSPPVVAPAQDSGLPSMADFAALQAALDALKLDRETQ 1347
LGSPNQR+E V E V SPEH S SPEKAEE+D+ FR QLSSSAG DSLIRENPEAL+DI RV++A AGS DE+S ME RRKLGTLV M+ ALGEVAL HT DM++QRKELAL PF AYYTAVR+GLCNAYLAASVI SDWV+T KTGG GK G AL L+SSAVPVI GL GL GKAL+ GDH LQTRRLVKITAMA D +ECCSLARRLAL+L DGL++D D DQV TAGM GSGSGR AD+ P DM E+DVFEYLLEEVA YE +D GGKRLGK+HLRKLL AIQRGCLD S+ I+QK+E LLLE+LP AD+R + TPK+VIVRSPP +AP D LPSMAD AALQAA++ L L ++ Q
Sbjct: 403 LGSPNQREEVVREGVRSPEHASLSPEKAEEVDRLFRVQLSSSAGFDSLIRENPEALEDIHRVIKAPAAGSLDFVDEISDMERRRKLGTLVNMAKALGEVALSHTEDMDVQRKELALTPFSKAYYTAVRSGLCNAYLAASVIDSDWVSTCKTGGMGKGGTALVLLSSAVPVISGLAGLAGKALRTGDHCLQTRRLVKITAMAADTMECCSLARRLALQLTDGLKDDTGMMDDEADQVYTHITAGMNGGSGSGRDADISPDDMIEDDVFEYLLEEVARYERSDHGGKRLGKKHLRKLLKAIQRGCLDGSSGIKQKMEALLLEILPGADIRTSETSSTPKKVIVRSPPALAPTHDGRLPSMADIAALQAAVEVLTLAKDKQ 780
BLAST of mRNA_E-fasciculatus_F_contig1301.2286.1 vs. uniprot
Match: D7FUA2_ECTSI (Leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA2_ECTSI) HSP 1 Score: 248 bits (634), Expect = 1.680e-68 Identity = 204/524 (38.93%), Postives = 284/524 (54.20%), Query Frame = 1
Query: 301 EMDQGFRTQLSSSAGLDSLIRENPEALQDIQRVMEAQVAGSFHPDDELSSMEGRRKLGTLVTMSTALGEVALRHTADMNIQRKELALAPFRNAYYTAVRTGLCNAYLAASVIGSDWVATSKTGGTGKAGAALNLMSSAVPVIGGLTGLTGKALQAGDHYLQTRRLVKITAMAPDAVECCSLARRLALELADGLRNDASATTDVTDQVRVDTTAGM---TSGSGSGRGADMLPGDMSEEDVFEYLLEEVASYESND----------RGGKRLGKRHLRKLLNAIQRGCLDDSTSIEQKIEVLLLEVLPEADVRPAAMPHTPKEVIVRSPPVVAPAQ-------------DSGLPSMADFAALQAALDALKLDRETQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQVQK------------------LAKHVPELDIEPDGDADCGGGLALRRRVAVTETA-EGFLDRARDRAAAAADHHPVTVSQQ-------REFEALQDEKHRDHEARLTELEGEISKATK 1716
+MD + Q+SS + L +L + + L+ +++++EA F P LS +L LV M+ LG++ RH + +IQR+ELAL P AYYTA+RTGLCNAYLAASV+ S V TSKTG G AG L +SSAVPV+ GL GL AL+AGD YLQTRR+ KI +APD+ +CC LAR LAL+L+DG + TTD ++ TAGM G G + P +EE V ++ +EEVA YE N+ + G++LGKRHL+ LL A+ R CL + + ++K++VL+ +LPEA+ R + H +E PA D S D AAL + ++++ E XXXXXXXXXXXXXXXXX L K V + + D GGGLAL++R AVTETA + FL+RA++RA AA + VT+ Q +E + DE HR+H+A+LT +G + + T+
Sbjct: 405 DMDHMTQAQISSFSALSTLCGGSHKRLEQVRQLVEALDINRFSPGTGLSETGTLGELNRLVAMAEDLGDMVSRHVMNEDIQRRELALPPGPKAYYTAIRTGLCNAYLAASVVCSSLVCTSKTGRMGTAGKTLEFLSSAVPVVSGLAGLAAAALKAGDRYLQTRRVSKICDIAPDSTDCCLLARTLALQLSDGYVDGTLPTTDTAEERGSHATAGMGGVEGGCGWSQDIGASPDSATEEAVMDWFVEEVADYEPNNVDARKTTAAVQAGRKLGKRHLQTLLKAVGRDCLRGTNTPDEKVKVLVGIILPEAERRVGSTSHVTRERTNHDASSAQPASRQSHAAATRPAVPDGAAKSDIDVAALMERVASMRMRTEATHEELKAGLEASHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILNKKVMKPGPDSDSLVASGGGLALKQRQAVTETALDDFLERAQERAPAAGND-VVTLGQLAEAVELLKEVHSKNDELHREHDAKLTRFQGAVDRITR 927
BLAST of mRNA_E-fasciculatus_F_contig1301.2286.1 vs. uniprot
Match: A0A6H5KJV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJV0_9PHAE) HSP 1 Score: 228 bits (582), Expect = 2.510e-64 Identity = 135/231 (58.44%), Postives = 157/231 (67.97%), Query Frame = 1
Query: 229 QRQEAVGERVPSPEHGSSSPEKAEEMDQGFRTQLSSSAGLDSLIRENPEALQDIQRVMEAQVAGSFHPDDELSSMEGRRKLGTLVTMSTALGEVA-------------------------------LRHTADMNIQRKELALAPFRNAYYTAVRTGLCNAYLAASVIGSDWVATSKTGGTGK---------AGAALNLMSSAVPVIGGLTGLTGKALQAGDHYLQTRRLVK 801
QR+E V ERV SPE S SPEK EE+D+ F QLSS AGL+SL+RENPEAL+DIQRV+++ V SF+PDD+ S M+GRRKL TLVTMSTALGEVA LRHT DM++QRKE+AL F AY T VR+GLC AYLA+SVI SDWV+ SKTGG GK AGAA+ LMS AVPV+GGL L GKAL+AGDH+ QTRRLVK
Sbjct: 135 QREEVVRERVRSPERASLSPEKTEEVDRLFTAQLSSHAGLNSLVRENPEALEDIQRVIQSTVVRSFYPDDKHSDMDGRRKLATLVTMSTALGEVAVSPVRGTIPSACTSNGLTSFSVRNWCRIWNVLRHTEDMDVQRKEMALPLFLKAYCTVVRSGLCQAYLASSVIDSDWVSMSKTGGMGKVGAALGSKSAGAAVKLMSRAVPVVGGLPELAGKALEAGDHFFQTRRLVK 365
BLAST of mRNA_E-fasciculatus_F_contig1301.2286.1 vs. uniprot
Match: D7FUA1_ECTSI (Putative Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA1_ECTSI) HSP 1 Score: 227 bits (579), Expect = 7.530e-61 Identity = 195/520 (37.50%), Postives = 279/520 (53.65%), Query Frame = 1
Query: 301 EMDQGFRTQLSSSAGLDSLIRENPEALQDIQRVMEAQVAGSFHPDDELSSMEGRRKLGTLVTMSTALGEVALRHTADMNIQRKELALAPFRNAYYTAVRTGLCNAYLAASVIGSDWVATSKTGGTGKAGAALNLMSSAVPVIGGLTGLTGKALQAGDHYLQTRRLVKITAMAPDAVECCSLARRLALELADGLRNDASATTDVTDQVRVDTTAGMTSGSGS-GRGADM--LPGDMSEEDVFEYLLEEVASYESND----------RGGKRLGKRHLRKLLNAIQRGCLDDSTSIEQKIEVLLLEVLPEADVRPAAMPHTPKEVIVRSPPVVAPAQ-------------DSGLPSMADFAALQAALDALKLDRETQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQVQKLA--------------KHVPELDIEPDGDADCGGGLALRRRVAVTETA-EGFLDRARDRAAAAADHHPVTVSQQ-------REFEALQDEKHRDHEARLTELEGEISKATK 1716
+MD + Q+SS + L +L + +L+ + +++EA P L+ +L LV M+ LG++ RH + +IQR+ELAL P AYYTA+RTGLCNAYLAASV+ S V TSKTG G AG L +SSAVPV+ GL GL AL+AGD YLQTRR+ KI MAPD+ +CC LAR LAL+L+DG + T D ++ TTAGM G G D+ P +EE V ++ +EEVA YE N + G++LG RHL+ LL A+ R CL + + ++K++VL+ +LPEA+ + + H +E PA D + D AAL + ++++ E XXXXXXXXXXXXXXXXX K + + ++P D+D AL++R AVTETA + FL+RA++RA AA + VT+ Q +E + DE HR+H+A+L+ + + + T+
Sbjct: 432 DMDHITQAQISSFSSLSTLCGGSQASLEQVGQLVEALGINRSSPGTGLNGTGTLGELNRLVAMAEDLGDMVSRHVTNEDIQRRELALPPGPKAYYTAIRTGLCNAYLAASVVSSSLVCTSKTGRMGTAGKTLEFLSSAVPVVSGLAGLAAAALKAGDRYLQTRRVSKICDMAPDSTDCCLLARALALQLSDGYVDGTLPTIDTAEERGTHTTAGMGGVEGECGWSQDIGASPDSATEEAVMDWFVEEVADYEPNKLDARKTTAAVQAGRKLGTRHLQTLLKAVGRDCLRGTNTPDEKVKVLVGIILPEAERKVGSTSHGTQERTNHDASSAQPASRQSHAAATRPAAPDGAAKNDLDVAALMERMASMRIRTEATHEELKAGLEASHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKILNKKVMKPGPDSDSLVASALKQRQAVTETAVDDFLERAQERAPAAGND-VVTLGQLTEAVELLKEVHSKYDELHREHDAKLSRFQRAVDRITR 950
BLAST of mRNA_E-fasciculatus_F_contig1301.2286.1 vs. uniprot
Match: D7FUA0_ECTSI (Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA0_ECTSI) HSP 1 Score: 220 bits (560), Expect = 6.280e-58 Identity = 137/322 (42.55%), Postives = 193/322 (59.94%), Query Frame = 1
Query: 301 EMDQGFRTQLSSSAGLDSLIRENPEALQDIQRVMEAQVAGSFHPDDELSSMEGRRKLGTLVTMSTALGEVALRHTADMNIQRKELALAPFRNAYYTAVRTGLCNAYLAASVIGSDWVATSKTGGTGKAGAALNLMSSAVPVIGGLTGLTGKALQAGDHYLQTRRLVKITAMAPDAVECCSLARRLALELADGLRNDASATTDVTDQVRVDTTAGM---TSGSGSGRGADMLPGDMSEEDVFEYLLEEVASYESND----------RGGKRLGKRHLRKLLNAIQRGCLDDSTSIEQKIEVLLLEVLPEADVRPAAMPHTPKE 1227
+MD + Q+SS + L +L ++L+ +++++EA P LS ++ LV M+ LG + RH + +IQR+ELAL P AYYTA+RTGLCNAYLAASV+ S V TSKTG G AG L +SSAVPV+ GL GL AL+AGD YLQTRR+ KI +APD+ +CC LAR LAL+L+DG + TTD ++ TTAGM G G + P +EE V ++ +EEVA YE N+ + G++LG RHL+ LL A+ R CL + + ++K++VL+ +LPEA+ R + H +E
Sbjct: 617 DMDDMTQAQISSFSALSTLCGGRHKSLEQVRQLVEALGINRSSPGTGLSETGTLGEVNRLVAMAEDLGGMVSRHVMNEDIQRRELALPPGPKAYYTAIRTGLCNAYLAASVVCSSLVCTSKTGRMGAAGKTLEFLSSAVPVVSGLAGLAAAALKAGDRYLQTRRVSKICDIAPDSTDCCLLARTLALQLSDGYVDGTLPTTDTAEERGTHTTAGMGGVEGGCGWSQDIGASPDSATEEAVMDWFVEEVADYEPNNLDARKTTPAVQAGRKLGTRHLQTLLKAVGRDCLRGTNTPDEKVKVLVGIILPEAERRVGSTSHGTRE 938 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1301.2286.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1301.2286.1 >prot_E-fasciculatus_F_contig1301.2286.1 ID=prot_E-fasciculatus_F_contig1301.2286.1|Name=mRNA_E-fasciculatus_F_contig1301.2286.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=575bp MKPPTLKVEQKEDAPVPPTSPPPVLLPQPQPDEGEEKEEDVPVPALSTPPback to top mRNA from alignment at E-fasciculatus_F_contig1301:58..4762+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1301.2286.1 ID=mRNA_E-fasciculatus_F_contig1301.2286.1|Name=mRNA_E-fasciculatus_F_contig1301.2286.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4705bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1301:58..4762+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1301:58..4762+ >mRNA_E-fasciculatus_F_contig1301.2286.1 ID=mRNA_E-fasciculatus_F_contig1301.2286.1|Name=mRNA_E-fasciculatus_F_contig1301.2286.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3450bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1301:58..4762+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |