mRNA_E-fasciculatus_F_contig13009.2285.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig13009.2285.1
Unique NamemRNA_E-fasciculatus_F_contig13009.2285.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig13009.2285.1 vs. uniprot
Match: D7FP10_ECTSI (TYRosinase family member (Tyr-3) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP10_ECTSI)

HSP 1 Score: 489 bits (1259), Expect = 8.490e-169
Identity = 229/259 (88.42%), Postives = 239/259 (92.28%), Query Frame = 1
Query:    1 VENFCYHIGLQFLTSHAAFDLTMERYLQMIDPSVSLPMWDFMIDSASFGHEWYNSVIFDKDWFGSAFGSPENSYAIPESRFSNISTIYDPDGALVDSRISPYHNAYGYVTSDYNYQDLPRISRTSSFCGVPSHAVLATAETFVDCFDGGYTTLSGWESCMENMVHGDIHGLLGGAFSCNTDMRTFSEDHPEYSAGLLSFVLEYMTFTFWPFNSFIPQANICQTSCSRGQ-ERFCGCTCMIDAFAIDDEQVGGWVRDYDT 774
            VENFCYHIGLQFLTSHAAFDLTMERYLQMIDPSVSLPMWDFMIDSAS GHEWYNSV+FD DWFGSAFGS EN YAIPESRF N+STIYDPDG LVDSRIS YHNAYGYVTS +NYQDLPR+SRTSSFCGVPSHAVL+TAETFVDCFDGGYTTLSGWESCME MVHGDIHGLLGGAFSCNTDM  FSE HPEYSAGLLSFVLEYMTFTFWP NSFIPQAN+CQTSCS GQ ERFC CTCMIDAFAIDD+QV  ++ D+ T
Sbjct:  188 VENFCYHIGLQFLTSHAAFDLTMERYLQMIDPSVSLPMWDFMIDSASLGHEWYNSVVFDNDWFGSAFGSQENGYAIPESRFGNVSTIYDPDGTLVDSRISSYHNAYGYVTSAFNYQDLPRMSRTSSFCGVPSHAVLSTAETFVDCFDGGYTTLSGWESCMETMVHGDIHGLLGGAFSCNTDMSAFSEAHPEYSAGLLSFVLEYMTFTFWPTNSFIPQANVCQTSCSTGQDERFCRCTCMIDAFAIDDKQVYAYMEDFMT 446          
BLAST of mRNA_E-fasciculatus_F_contig13009.2285.1 vs. uniprot
Match: D7G530_ECTSI (Hypothetical tyrosinase-like protein F21C3.2 in chromosome I, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G530_ECTSI)

HSP 1 Score: 345 bits (885), Expect = 1.930e-113
Identity = 154/255 (60.39%), Postives = 192/255 (75.29%), Query Frame = 1
Query:    4 ENFCYHIGLQFLTSHAAFDLTMERYLQMIDPSVSLPMWDFMIDSASFGHEWYNSVIFDKDWFGSAFGSPENSYAIPESRFSNISTIYDPDGALVDSRISPYHNAYGYVTSDYNYQDLPRISRTSSFCGVPSHAVLATAETFVDCFDGGYTTLSGWESCMENMVHGDIHGLLGGAFSCNTDMRTFSEDHPEYSAGLLSFVLEYMTFTFWPFNSFIPQANICQTSCSRGQERFCGCTCMIDAFAIDDEQVGGWVRDY 768
            +NFCYH G+QFLTSHAAFDL +ERYLQMIDP+VSLP+WD+MIDSA  G EWY+SV+F  DWFGSA G  EN + +   RF N+S IYDPD  L DSR++P HN YGY++S +NYQDLPR++RTSS+CG+ S    AT + F+ CF G   +L GWE CM+  +HGDIHGLLGGAF CNTDM  FS +HPEYS GLL+F L+ +TF F   N+  P  N+C  SC RGQ   CGCTC++DAFAI +EQV G+++ +
Sbjct:  159 KNFCYHQGMQFLTSHAAFDLIVERYLQMIDPTVSLPVWDYMIDSALLGLEWYDSVMFQPDWFGSAMGDVENHFMVTGGRFGNVSAIYDPDYTLTDSRVTPTHNPYGYLSSSHNYQDLPRLTRTSSYCGLQSRDTFATLDVFLGCF-GDNRSLYGWEECMQYKIHGDIHGLLGGAFDCNTDMANFSAEHPEYSHGLLAFALQILTFKFTACNALTPDDNVCDASCDRGQTEPCGCTCLMDAFAISEEQVYGYMQPF 412          
BLAST of mRNA_E-fasciculatus_F_contig13009.2285.1 vs. uniprot
Match: D8LM86_ECTSI (Hypothetical tyrosinase-like protein F21C3.2 in chromosome I, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM86_ECTSI)

HSP 1 Score: 337 bits (864), Expect = 1.910e-109
Identity = 153/254 (60.24%), Postives = 185/254 (72.83%), Query Frame = 1
Query:    1 VENFCYHIGLQFLTSHAAFDLTMERYLQMIDPSVSLPMWDFMIDSASFGHEWYNSVIFDKDWFGSAFGSPENSYAIPESRFSNISTIYDPDGALVDSRISPYHNAYGYVTSDYNYQDLPRISRTSSFCGVPSHAVLATAETFVDCFDGGYTTLSGWESCMENMVHGDIHGLLGGAFSCNTDMRTFSEDHPEYSAGLLSFVLEYMTFTFWPFNSFIPQANICQTSCSRGQERFCGCTCMIDAFAIDDEQVGGWVR 762
            V+NFCYH G+QFLTSHAAFDLTMERYLQMIDP+VSLP+WD+MIDSA  G EWY S IF  DWFGSA    EN + +   RF N+S IYDP+  L DSR+ P HN YGYV+S +NYQDLPR++RTSS+CG+ S   LAT + F+ CF+   +    WE CM+  +HGDIHGLLGGAF CNTDM  FS +HPEYS GLL+F L+ +TF F  +N   P  N C   C +GQ   CGCTC+IDAFAI D+QV G++ 
Sbjct:  196 VQNFCYHQGMQFLTSHAAFDLTMERYLQMIDPTVSLPVWDYMIDSAWLGLEWYESEIFQPDWFGSAMSDVENHFMVTGGRFGNVSAIYDPEDTLTDSRVKPTHNPYGYVSSPHNYQDLPRLTRTSSYCGLQSRDTLATLDAFLGCFEESRSFYD-WEYCMQYKIHGDIHGLLGGAFDCNTDMADFSAEHPEYSHGLLAFTLQILTFKFTAWNILTPDDNTCDAKCMKGQTEPCGCTCLIDAFAIPDQQVYGYME 448          
BLAST of mRNA_E-fasciculatus_F_contig13009.2285.1 vs. uniprot
Match: A0A6H5JD30_9PHAE (Tyrosinase_Cu-bd domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD30_9PHAE)

HSP 1 Score: 320 bits (821), Expect = 4.010e-108
Identity = 146/164 (89.02%), Postives = 154/164 (93.90%), Query Frame = 1
Query:    1 VENFCYHIGLQFLTSHAAFDLTMERYLQMIDPSVSLPMWDFMIDSASFGHEWYNSVIFDKDWFGSAFGSPENSYAIPESRFSNISTIYDPDGALVDSRISPYHNAYGYVTSDYNYQDLPRISRTSSFCGVPSHAVLATAETFVDCFDGGYTTLSGWESCMENMV 492
            VENFCYHIGLQFLTSHAAFDLTMERYLQMIDPSVSLPMWDFM DSAS GHEWYNSV+FD DWFGSAFGSPEN YAI ESRF N+STI+DPDG LVDSRI PYHNAYGYVTS YNYQDLPR+SRTSSFCG+PSHAVL+TAETFV+CFDGG+TTLSGWESCME MV
Sbjct:   64 VENFCYHIGLQFLTSHAAFDLTMERYLQMIDPSVSLPMWDFMTDSASLGHEWYNSVVFDNDWFGSAFGSPENGYAISESRFGNVSTIFDPDGTLVDSRIGPYHNAYGYVTSAYNYQDLPRMSRTSSFCGLPSHAVLSTAETFVECFDGGHTTLSGWESCMETMV 227          
BLAST of mRNA_E-fasciculatus_F_contig13009.2285.1 vs. uniprot
Match: D7FSG6_ECTSI (Common central domain of tyrosinase family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSG6_ECTSI)

HSP 1 Score: 294 bits (752), Expect = 1.460e-92
Identity = 134/252 (53.17%), Postives = 181/252 (71.83%), Query Frame = 1
Query:    1 VENFCYHIGLQFLTSHAAFDLTMERYLQMIDPSVSLPMWDFMIDSASFGHEWYNSVIFDKDWFGSAFGSPENSYAIPESRFSNISTIYDPDGALVDSR--ISPYHNAYGYVTSDYNYQDLPRISRTSSFCGVPSHAVLATAETFVDCFDGGYTTLSGWESCMENMVHGDIHGLLGGAFSCNTDMRTFSEDHPEYSAGLLSFVLEYMTFTFWPFNSFIPQ-ANICQTSCSRGQERFCGCTCMIDAFAIDDEQV 747
            +++FCYH G+QFLT+HAAF L +ER LQ I+P VSLP WD+MI++ + G +W +S IFD D FG A GS +N Y I + RF  IS IYDP   L  +   I P+HNAYG++++ YNYQ+ P ++RTSSFC + + +V AT++ F  CF   + TL  WE CME+ VHGD+HGLLGGAF C+ DM  F EDHPEY+ GLL+FV+EY+T  FWP N+F+P  +N C+T C  GQE  CGCTC +DA A+ ++++
Sbjct:  180 LKSFCYHAGVQFLTAHAAFGLMLERSLQKINPRVSLPFWDYMIEAETLGPDWQDSPIFDDDMFGRAMGSADNGYQISDGRFGKISAIYDPHHNLPGNGLDIGPHHNAYGFLSATYNYQEAPLLTRTSSFCNLKADSVFATSDDFFSCFTA-HDTLGDWEHCMESKVHGDMHGLLGGAFKCSVDMHEFHEDHPEYTTGLLTFVVEYLTTKFWPNNAFMPPGSNTCETECVSGQEP-CGCTCSVDAMALSEDEI 429          
BLAST of mRNA_E-fasciculatus_F_contig13009.2285.1 vs. uniprot
Match: A0A6H5KMG1_9PHAE (TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KMG1_9PHAE)

HSP 1 Score: 255 bits (651), Expect = 2.090e-77
Identity = 117/256 (45.70%), Postives = 164/256 (64.06%), Query Frame = 1
Query:    4 ENFCYHIGLQFLTSHAAFDLTMERYLQMIDPSVSLPMWDFMIDSASFGHEWYNSVIFDKDWFGSAFGSPENSYAIPESRFSNISTIYDPDGALVDSR--ISPYHNAYGYVTSDYNYQDLPRISRTSSFCGVPSHAVLATAETFVDCFDGGYTTLSGWESCMENMVHGDIHGLLGGAFSCNTDMRTFSEDHPEYSAGLLSFVLEYMTFTFWPFNSFIPQANICQTSCSRGQERFCGCTCMIDAFAIDDEQVGGWVRD 765
             ++C+H G+ FL +HAAFDL +E  LQ IDP VSLP WD+M+++A  G EW +S IF  D FGSA GSP+N + I +  FSNIS++YDP G L+ +   IS  HN YG+V S YNYQ +P +SRTSS+CG+   +  +  E FV CF+    +L  W  CME+ VH  +HG++GG F+CN +M  F E +P++S  LL+F L+++    WP NS +   N C   C+ GQ   CGCTC+ D F   D+ +  ++ D
Sbjct:  205 RDYCFHNGMHFLNAHAAFDLWVESNLQKIDPKVSLPQWDYMLEAAHLGTEWGDSEIFGPDMFGSALGSPDNQFQISDGWFSNISSVYDPAGDLLSAEADISTNHNPYGFVGSTYNYQSIPGVSRTSSYCGLQGVSEFSKCEVFVGCFEDN-NSLYEWAVCMEHSVHASMHGMIGGGFNCNVNMAEFQEANPQFSPELLTFTLQFLLANKWPSNSLMEDFNYCDEDCAVGQTHPCGCTCITDPFEWTDDAIYDFMED 459          
BLAST of mRNA_E-fasciculatus_F_contig13009.2285.1 vs. uniprot
Match: A0A6H5KPW4_9PHAE (Tyrosinase_Cu-bd domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPW4_9PHAE)

HSP 1 Score: 257 bits (657), Expect = 3.040e-77
Identity = 121/256 (47.27%), Postives = 163/256 (63.67%), Query Frame = 1
Query:    7 NFCYHIGLQFLTSHAAFDLTMERYLQMIDPSVSLPMWDFMIDSASFGHEWYNSVIFDKDWFGSAFGSPENSYAIPESRFSNISTIYDPDGALV---DSRISPYHNAYGYVTSDYNYQDLPRISRTSSFCGVPSHAVLATAETFVDCFDGGYTTLSGWESCMENMVHGDIHGLLGGAFSCNTDMRTFSEDHPEYSAGLLSFVLEYMTFTFWPFNSFIPQANICQTSCSRGQERFCGCTCMIDAFAIDDEQVGGWVRD 765
            ++C+H G+ FL +HAAFDL +E  LQ IDP VSLP WD+M+++A  G EW +S IF  D FGSA GSP N + I +  FSNI+++YDP G ++   +S I+  HN+YG+V   YN+Q LP + RTSS+CG+   A     E FVDCF+   TT   W SCME+ VH  IHG++GG F CN DM  F E++P+Y  GLL+F L Y+    WP NS +   N C   C   Q   CGCTC++D F   D++V  ++ D
Sbjct:  323 DYCFHNGMHFLNAHAAFDLWVESNLQKIDPKVSLPQWDYMLEAAHLGTEWPSSEIFSPDMFGSALGSPVNQFQISDGWFSNITSLYDPRGDILTPAESFITTSHNSYGFVDGVYNFQALPGVVRTSSYCGLEVVAEFTKCEVFVDCFESS-TTFHVWASCMEHQVHASIHGMIGGGFDCNIDMIEFHEENPQYDQGLLTFTLGYVLANKWPSNSLMRDFNECDEQCDVDQGEPCGCTCLVDPFEWTDDEVYDFMED 577          
BLAST of mRNA_E-fasciculatus_F_contig13009.2285.1 vs. uniprot
Match: A0A6H5JFE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFE6_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 3.450e-37
Identity = 67/78 (85.90%), Postives = 69/78 (88.46%), Query Frame = 1
Query:  544 MRTFSEDHPEYSAGLLSFVLEYMTFTFWPFNSFIPQANICQTSCSRGQERFCGCTCMIDAFAIDDEQVG---GWVRDY 768
            M TFSE HPEYSAGLLSFVLEYMTFTFWP NSFIPQAN+CQTSCS GQ+RFCGCTCMIDAFAIDDEQVG   GWV  Y
Sbjct:    1 MSTFSEAHPEYSAGLLSFVLEYMTFTFWPTNSFIPQANVCQTSCSTGQKRFCGCTCMIDAFAIDDEQVGWVGGWVYAY 78          
BLAST of mRNA_E-fasciculatus_F_contig13009.2285.1 vs. uniprot
Match: F0YFU7_AURAN (Tyrosinase_Cu-bd domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFU7_AURAN)

HSP 1 Score: 123 bits (309), Expect = 2.000e-28
Identity = 70/238 (29.41%), Postives = 111/238 (46.64%), Query Frame = 1
Query:   16 YHIGLQFLTSHAAFDLTMERYLQMIDPSVSLPMWDFMIDSASFGHEWYNSVIFDKDWFGSAFGSPENSYAIPESRFSNISTIYDPDGALVDSRISPYHNAYGYVTSDYNYQDLPRISRTSSFCGVPSHAVLATAETFVDCFDGGYTTLSGWESCMENMVHGDIHGLLGGAFSCNTDMRTFSEDHPEYSAGLLSFVLEYMTFTFWPFNSFIPQANICQTSCSRGQERFCGCTCMIDAFA 729
            +H GL FLT+H AF   ++R +Q++DP V  P WDF +D+   G  W  S +F  DWFG     P+N+    E RF+N+S   D D  +        HNAY  VT + N      ++R    CG+ +   L     F  C     T+L+   +C E+++HG++H ++GG F C   +     +HP +   L    +       W  + +  +A  C   C   ++ +  C C   A +
Sbjct:  215 FHGGLSFLTAHTAFTYEVDRAMQLVDPGVLTPYWDFTLDAEFLGANWTESQLFQLDWFGPLM--PKNAQRTLEGRFANVSVPSDCDFDV--------HNAYCRVTDERNEDPSALVTRAHELCGLKTDVALPGCSEFSQCLTT--TSLTDLHTCAEDVMHGNMHTVIGGFFGCPYALGDLVANHPSWEEMLTG--IGTRAINIWQ-HVYGAKAMKCPLKCDAAEDSWETCHCSCPALS 437          
BLAST of mRNA_E-fasciculatus_F_contig13009.2285.1 vs. uniprot
Match: A0A7S2BXX5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BXX5_9STRA)

HSP 1 Score: 117 bits (294), Expect = 1.330e-26
Identity = 63/193 (32.64%), Postives = 96/193 (49.74%), Query Frame = 1
Query:   16 YHIGLQFLTSHAAFDLTMERYLQMIDPSVSLPMWDFMIDSASFGHEWYNSVIFDKDWFGSAFGSPENSYAIPESRFSNISTIYDPDGALVDSRISPYHNAYGYVTSDYNYQDLPRISRTSSFCGVPSHAVLATAETFVDCFDGGYTTLSGWESCMENMVHGDIHGLLGGAFSCNTDMRTFSEDHPEYSAGLLS 594
            YH  L F T+HAAF L ++  LQ ++PSV  P WDF +DS   G++W  S +F   W+G+A  +P N     + RFS        D ++        HNAYG VT   N    P ++R   FCG+     +   +    C       L     C EN++HG+IH ++GG + C   M+ +++ +P+    LL+
Sbjct:  103 YHGWLSFFTAHAAFTLELDAGLQAVNPSVIQPYWDFTVDSLELGNDWDQSQLFSDLWYGNA--TPSNFERSVDGRFSATPMTTSFDFSV--------HNAYGRVTDTRNCDPSPYVTRAHEFCGIDIDYPIPGCQELAQCLQT--ENLVDLHDCSENVLHGNIHTVIGGFWDCKYSMKDYAKKYPQREELLLN 283          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13009.2285.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FP10_ECTSI8.490e-16988.42TYRosinase family member (Tyr-3) n=1 Tax=Ectocarpu... [more]
D7G530_ECTSI1.930e-11360.39Hypothetical tyrosinase-like protein F21C3.2 in ch... [more]
D8LM86_ECTSI1.910e-10960.24Hypothetical tyrosinase-like protein F21C3.2 in ch... [more]
A0A6H5JD30_9PHAE4.010e-10889.02Tyrosinase_Cu-bd domain-containing protein n=1 Tax... [more]
D7FSG6_ECTSI1.460e-9253.17Common central domain of tyrosinase family protein... [more]
A0A6H5KMG1_9PHAE2.090e-7745.70TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
A0A6H5KPW4_9PHAE3.040e-7747.27Tyrosinase_Cu-bd domain-containing protein n=2 Tax... [more]
A0A6H5JFE6_9PHAE3.450e-3785.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
F0YFU7_AURAN2.000e-2829.41Tyrosinase_Cu-bd domain-containing protein n=1 Tax... [more]
A0A7S2BXX5_9STRA1.330e-2632.64Hypothetical protein n=1 Tax=Florenciella parvula ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13009contigE-fasciculatus_F_contig13009:28..3774 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score488.8
Seed ortholog evalue1.6e-135
Seed eggNOG ortholog2880.D7FP10
EggNOG free text desc.Common central domain of tyrosinase
EggNOG OGs2D2GE@1,2SMT5@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionUncharacterised domain, di-copper centre
Ec32 orthologEc-05_001830.1
Exons5
Model size774
Cds size774
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13009.2285.1prot_E-fasciculatus_F_contig13009.2285.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig13009 28..3774 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927806.5993695-CDS-E-fasciculatus_F_contig13009:27..2641622927806.5993695-CDS-E-fasciculatus_F_contig13009:27..264Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13009 28..264 -
1695995702.9088774-CDS-E-fasciculatus_F_contig13009:27..2641695995702.9088774-CDS-E-fasciculatus_F_contig13009:27..264Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13009 28..264 -
1622927806.6172786-CDS-E-fasciculatus_F_contig13009:697..7451622927806.6172786-CDS-E-fasciculatus_F_contig13009:697..745Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13009 698..745 -
1695995702.9215472-CDS-E-fasciculatus_F_contig13009:697..7451695995702.9215472-CDS-E-fasciculatus_F_contig13009:697..745Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13009 698..745 -
1622927806.6312916-CDS-E-fasciculatus_F_contig13009:2412..25531622927806.6312916-CDS-E-fasciculatus_F_contig13009:2412..2553Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13009 2413..2553 -
1695995702.9304624-CDS-E-fasciculatus_F_contig13009:2412..25531695995702.9304624-CDS-E-fasciculatus_F_contig13009:2412..2553Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13009 2413..2553 -
1622927806.6819696-CDS-E-fasciculatus_F_contig13009:3315..35111622927806.6819696-CDS-E-fasciculatus_F_contig13009:3315..3511Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13009 3316..3511 -
1695995702.9386299-CDS-E-fasciculatus_F_contig13009:3315..35111695995702.9386299-CDS-E-fasciculatus_F_contig13009:3315..3511Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13009 3316..3511 -
1622927806.7027578-CDS-E-fasciculatus_F_contig13009:3622..37741622927806.7027578-CDS-E-fasciculatus_F_contig13009:3622..3774Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13009 3623..3774 -
1695995702.9541554-CDS-E-fasciculatus_F_contig13009:3622..37741695995702.9541554-CDS-E-fasciculatus_F_contig13009:3622..3774Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13009 3623..3774 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig13009.2285.1

>prot_E-fasciculatus_F_contig13009.2285.1 ID=prot_E-fasciculatus_F_contig13009.2285.1|Name=mRNA_E-fasciculatus_F_contig13009.2285.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=258bp
VENFCYHIGLQFLTSHAAFDLTMERYLQMIDPSVSLPMWDFMIDSASFGH
EWYNSVIFDKDWFGSAFGSPENSYAIPESRFSNISTIYDPDGALVDSRIS
PYHNAYGYVTSDYNYQDLPRISRTSSFCGVPSHAVLATAETFVDCFDGGY
TTLSGWESCMENMVHGDIHGLLGGAFSCNTDMRTFSEDHPEYSAGLLSFV
LEYMTFTFWPFNSFIPQANICQTSCSRGQERFCGCTCMIDAFAIDDEQVG
GWVRDYDT
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mRNA from alignment at E-fasciculatus_F_contig13009:28..3774-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig13009.2285.1 ID=mRNA_E-fasciculatus_F_contig13009.2285.1|Name=mRNA_E-fasciculatus_F_contig13009.2285.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3747bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13009:28..3774- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GTCGAGAACTTCTGCTACCATATCGGGCTGCAGTTCTTGACAAGCCACGC GGCCTTTGACCTCACCATGGAGCGCTACCTTCAGATGATCGACCCCAGCG TTTCGCTTCCGATGTGGGATTTCATGATCGATTCCGCATCCTTCGGGCAC GAGTGAGTGATACAACATCACAGGGGTTTGAAACAGACAAAGACTCCAGG ATCGAACGACCAAGCGAATTCATCACGCCGCAATACTGCCTTTGTACCAT TGTTGTCGTACAGGTGGTACAACAGCGTCATCTTCGACAAGGACTGGTTC GGCTCCGCCTTTGGATCTCCGGAGAACAGCTACGCGATCCCCGAGAGCCG CTTCAGCAACATCTCCACGATTTACGACCCGGACGGGGCGCTGGTGGACA GCAGGATAAGCCCTTACCACAACGCCTACGGCTACGTGACCTCGGACTAC AACTACCAGGTACACTGTAGGTGTTTGGTTGGCGGTTGCTATCCGTAGGG ACGCTTCTTCCTACGGGGGGTGGAGAGAGGGAGAGGGACAGGGACGAGAG GTGCAGAGACAGAGAGAGAGGGAGAGAGAAAGAGAAGGAGAAAGAGGAAG ATAAAGAGAAAGAGACAGAGAAAGAGACAAAGAGATAGAACTGTGATAAT CCCATCAAGAAAGCACACATGGTTGTTGGTTTCGGCACGCGCGGGCGTCG GGTTCCGACATTTGATATTATGAAATCCGTGTGCCAAGTCTCGTTGACAA CAACATCCGACCTACCTAATGTGAGGTCGTTCGTCCGTTGTGTTTGCTCC TTTTCTGTCTCGCGCAGTATTTGGTAGTGTGTGAGCAGATCAGCCACCCC TGGTCACATCGTACAAGGGGGAGGGGTCAAAGGTAGCCTTGGATGCGTGT TGTGTGTTTTCGTTTTGTCCCCAGTCTCGGCATGTGTTTGACGCGTCCAT ATCATCCTCAGTCACCGGGAGCACAAGGGAGAATGTAGTGCGTTGTTTGT CCCAACCCCCCCCTTCGGTGCCTTCTTCCCATGCTTGGTACGAGGAGGGC TCCGGGTGACGGCGAAGGTGGTACTTTTCGCCCCGTCATCGGACGGCGGA CCTCACCGACCATCTCCCCTGACCCTGGCCTGCGCCGCCCCACAGCCTGG TCACAAGAAATGAAATGCGCATACCCACGCACGGGAATCCCCTCGCAAAC AAACCCAACCGTTCGTTGCAGGATCTCCCGAGAATATCCCGTACGAGTTC GTTCTGCGGCGTGCCTTCGCACGCGGTTCTCGCGACGGCCGAGACGTTCG TGGACTGCTTCGACGGCGGTTACACCACGCTCTCGGGCTGGGAGTCCTGC ATGGAGAACATGGTACGTACGTACGTACGTACGTACGTACATGCAGTCTC CTCTCTTCTCTCTCTCTCGTTAGCGTGTACGTACGTATTTGTTGTACGAG TCATAACCGCCCTCTCTCTCCCTCTCGTTTGCGCCCTTACACAACATTTC GCCGTAGTTGGTATACGTTTTACTTCGTCGAAATGCGGGAAACGCCTCAG TGCTCGCGGACGGCGATCTCAGCCGCGCCGAGAGCTTTTTGCGCTCTCTT CGAGTGCGTATCCCCGCCTGCAATGCTCTGCCCTTGCCCTGTTGTTGCCG AGACGGTTTTGTGGCAGGTCGCCTGATACAGGTAATAGCCGGCCGGGCCT GCTACTGCTGTACAGTTGAGATGCGTAGACAAAAATAACGACATGCTCAG ATTTTCCCGGAGAATGAGGAACTGGGGTCGAGAAACACAGCACAGGGTGA ATCTTACAACATGGTTTGTCATGTGCTAATCATCCCGTGAGGCAGTGTCC TAAGTCAACCTGTTTATGTGGTAAGTCATCCTAGGTGGTAGTCACATCAC ATGCAGTGAAATCCTGCGTATGAGGTAGTCATCCTATGTGAGCGTCATCA CAAGTGGTGGTAATCCTGTGTGGTAATAATCCCTTGTGGTAGTAGCCCTA CGTATGCGATTGTCATGGCATGGGGCAGTCATCCCATGTGGTACACATCC TACGTTTGTGGTGGTAATCCTACGTTTGTTGTAGTCATCCCATGTGGTAA ATACCCTGCGTATGTGGTGATAATCGTACGTTCGTGGGTGGGGGGTGTGG TAATCCTACATACCAAGGTAGTCACCCTTGTGGTACTCATCTCAAGTGGT GGTAACTCTATCTGGTAGTCCTACGTTTGTGGTTGTCATCGTATATGGTA GTCATCACACGTGGTACAATCCTACGAATGTGGTAGTATTTCTACGTTTG TGGTAGTCATCCCACGTGGTGGTAATCCTATGTGGCAGTAGACTAATCCC ATATGGTGGTAACCCTACGTATTATGTATGTGGTGGCAATCCTACGTCAT CCAATGTGGTGGTAATCCCATGTCATGTGGTGGAAATCCTACGTAGGTGG TACTTGTCCTGAGTATGACACCATCATCGCAGGTGGTGAGCCTACGTGCG GGTGATGGTCATCCTATGGGGTCAAAATCCTTCGTATGCGGTGGTAATCC TACGTTTGTCGTAGTCATCCCGTGGGGTGGTAATACTACATATGAGGTAG TCATCTTATGTGGTAGTCATTCTGAGCGGTAGTCATCTATGCTCGACGGT ATAGCAACAAAAACGTGAGGAACGGAGCCTCGACCCGACACTTACCCTTC TCTAGCGAGAGGTACGTAGGAAGCGCCAAGTTCCGAATGCTTGGTGTGGA CTTTTCTCGGTTTTTGGGCCGCACCCTCGTCTCGATCTCCCATGTCTACG GGCGGATGGGGTGTGTTTGCCCCTTTTTGATGGCACACTCTCGTTGGTAG ACCCCAGTGTGCCCATGTTTTCCAGGGGCTCCAGGCATTTTTTAAGTATT CGGCACGGAAGAGAAAAAGAACGCCGGGCGCGATCTAGAGAGTATCTAAC AGTGAGTAGCAGCGCGAGGATTCATTCGCGCGCTCTTCGACTTCATGTTG GTGCCCGGCAATCCCAACCGCTGCCACAGGTGCACGGGGACATCCACGGT CTGCTGGGTGGCGCGTTCAGCTGCAATGTAAGCAAGTGCATTTGCCGTGT ATGAAAACGGACGTATTTTTCACAATCCCTGGTGCTCACTTGAAGCACAA TGGGCTGCACCAAGTGAGGACCACATACCATATTTCTTACGTCCCTCCCC GCTCGCGTCACCTCGAGCCTTTATTCATTGATCCAAAATCATTGATGTTT TTATATTAATATTCATTCAATTATTCATTCAGTCCCCGTCGCCGCTGAAA ACGAGAATGAGCGCTACTGTAGTAGGCCCGGTCTTTTAACCTCGCGTGAC GAAACGCGGTTAACAGCTTGCCTGAGAAAAACAGTCATTCGGAAGGTTAT TCATCCTTAAGCGCGTAGGTGCGGTAATAAACGTTCCGCCCAGATGGACT TACGTTGGTTTTCTTCCCCCCCTGGGTCCTAAACAACGACCCCCCCCCTT GCTGCCGAAGACGGACATGAGGACCTTCTCCGAGGACCACCCGGAGTATT CCGCGGGACTCCTTAGCTTCGTGCTGGAATACATGACCTTCACCTTCTGG CCGTTCAACAGCTTCATCCCGCAGGCAAACATTTGCCAGACGAGCTGTTC CAGGGGACAAGAGAGGTTCTGCGGGTGCACGTGCATGATCGACGCCTTTG CAATCGACGACGAACAGGTGGGTGGGTGGGTGCGAGACTACGATACC
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13009:28..3774-

>mRNA_E-fasciculatus_F_contig13009.2285.1 ID=mRNA_E-fasciculatus_F_contig13009.2285.1|Name=mRNA_E-fasciculatus_F_contig13009.2285.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1548bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13009:28..3774- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GTCGAGAACTTCTGCTACCATATCGGGCTGCAGTTCTTGACAAGCCACGC
GGCCTTTGACCTCACCATGGAGCGCTACCTTCAGATGATCGACCCCAGCG
TTTCGCTTCCGATGTGGGATTTCATGATCGATTCCGCATCCTTCGGGCAC
GAGTCGAGAACTTCTGCTACCATATCGGGCTGCAGTTCTTGACAAGCCAC
GCGGCCTTTGACCTCACCATGGAGCGCTACCTTCAGATGATCGACCCCAG
CGTTTCGCTTCCGATGTGGGATTTCATGATCGATTCCGCATCCTTCGGGC
ACGAGTGGTACAACAGCGTCATCTTCGACAAGGACTGGTTCGGCTCCGCC
TTTGGATCTCCGGAGAACAGCTACGCGATCCCCGAGAGCCGCTTCAGCAA
CATCTCCACGATTTACGACCCGGACGGGGCGCTGGTGGACAGCAGGATAA
GCCCTTACCACAACGCCTACGGCTACGTGACCTCGGACTACAACTACCAG
GTGGTACAACAGCGTCATCTTCGACAAGGACTGGTTCGGCTCCGCCTTTG
GATCTCCGGAGAACAGCTACGCGATCCCCGAGAGCCGCTTCAGCAACATC
TCCACGATTTACGACCCGGACGGGGCGCTGGTGGACAGCAGGATAAGCCC
TTACCACAACGCCTACGGCTACGTGACCTCGGACTACAACTACCAGGATC
TCCCGAGAATATCCCGTACGAGTTCGTTCTGCGGCGTGCCTTCGCACGCG
GTTCTCGCGACGGCCGAGACGTTCGTGGACTGCTTCGACGGCGGTTACAC
CACGCTCTCGGGCTGGGAGTCCTGCATGGAGAACATGGATCTCCCGAGAA
TATCCCGTACGAGTTCGTTCTGCGGCGTGCCTTCGCACGCGGTTCTCGCG
ACGGCCGAGACGTTCGTGGACTGCTTCGACGGCGGTTACACCACGCTCTC
GGGCTGGGAGTCCTGCATGGAGAACATGGTGCACGGGGACATCCACGGTC
TGCTGGGTGGCGCGTTCAGCTGCAATGTGCACGGGGACATCCACGGTCTG
CTGGGTGGCGCGTTCAGCTGCAATACGGACATGAGGACCTTCTCCGAGGA
CCACCCGGAGTATTCCGCGGGACTCCTTAGCTTCGTGCTGGAATACATGA
CCTTCACCTTCTGGCCGTTCAACAGCTTCATCCCGCAGGCAAACATTTGC
CAGACGAGCTGTTCCAGGGGACAAGAGAGGTTCTGCGGGTGCACGTGCAT
GATCGACGCCTTTGCAATCGACGACGAACAGGTGGGTGGGTGGGTGCGAG
ACTACGATACCACGGACATGAGGACCTTCTCCGAGGACCACCCGGAGTAT
TCCGCGGGACTCCTTAGCTTCGTGCTGGAATACATGACCTTCACCTTCTG
GCCGTTCAACAGCTTCATCCCGCAGGCAAACATTTGCCAGACGAGCTGTT
CCAGGGGACAAGAGAGGTTCTGCGGGTGCACGTGCATGATCGACGCCTTT
GCAATCGACGACGAACAGGTGGGTGGGTGGGTGCGAGACTACGATACC
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