mRNA_E-fasciculatus_F_contig12994.2268.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig12994.2268.1
Unique NamemRNA_E-fasciculatus_F_contig12994.2268.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig12994.2268.1 vs. uniprot
Match: D8LTR7_ECTSI (3-ketoacyl-CoA synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTR7_ECTSI)

HSP 1 Score: 380 bits (975), Expect = 1.290e-128
Identity = 185/190 (97.37%), Postives = 188/190 (98.95%), Query Frame = 1
Query:    1 RVQGAGRDAFEAVYESEDKLGHHGVRLSKEIVKVAGRAMEKNFTSLGPYVLPISEQYKVVKALALRKVTKAIREMLEKRKSSLAKKVPIIAYYQPDFKRGIDHFCIHAGGRGVIDGIEKNLALQEHHTEPSRATLRDYGNTSSSSIWYEMKYIEEHSDLRRGQRILQVAFGSGFKCNSAVWICLNPPDRK 570
            R QGAG+DAFEAVYESED LG+HGVRLSKEIVKVAGRAMEKNFTSLGPYVLPISEQYKVVKALALRKVTKA+REMLEKRKSSLAKKVPIIAYYQPDFKRGIDHFCIHAGGRGVIDGIEKNLALQEHHTEPSRATLRDYGNTSSSSIWYEMKYIEEHSDLRRGQRILQVAFGSGFKCNSAVWICLNPPDRK
Sbjct:  318 RTQGAGKDAFEAVYESEDNLGNHGVRLSKEIVKVAGRAMEKNFTSLGPYVLPISEQYKVVKALALRKVTKALREMLEKRKSSLAKKVPIIAYYQPDFKRGIDHFCIHAGGRGVIDGIEKNLALQEHHTEPSRATLRDYGNTSSSSIWYEMKYIEEHSDLRRGQRILQVAFGSGFKCNSAVWICLNPPDRK 507          
BLAST of mRNA_E-fasciculatus_F_contig12994.2268.1 vs. uniprot
Match: A0A7S2XYV1_9STRA (3-ketoacyl-CoA synthase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYV1_9STRA)

HSP 1 Score: 280 bits (717), Expect = 2.010e-89
Identity = 136/189 (71.96%), Postives = 155/189 (82.01%), Query Frame = 1
Query:    1 RVQGAGRDAFEAVYESEDKLGHHGVRLSKEIVKVAGRAMEKNFTSLGPYVLPISEQYKVVKALALRKVTKAIREMLEKRKSSLAKKVPIIAYYQPDFKRGIDHFCIHAGGRGVIDGIEKNLALQEHHTEPSRATLRDYGNTSSSSIWYEMKYIEEHSDLRRGQRILQVAFGSGFKCNSAVWICLNPPDR 567
            R QG G DA+EAVYE EDK GHHGV+LSK+IV VAGR MEKNFT+LGP VLP+SEQ KVV A+ LRK T+ I       K +L+K V +   Y PDFKRGIDHFCIHAGGR VIDG+EKNL LQ +HTEPSRATLRDYGNTSSSSIWYEMKY+EEH  L+RGQR+LQ+AFGSGFKCNSAVW+ L+PP +
Sbjct:  340 RTQGIGEDAYEAVYECEDKDGHHGVKLSKDIVMVAGRTMEKNFTTLGPLVLPLSEQAKVVWAIVLRKATQWI-------KRNLSKGVNVTKNYVPDFKRGIDHFCIHAGGRAVIDGVEKNLKLQPYHTEPSRATLRDYGNTSSSSIWYEMKYVEEHQVLKRGQRLLQIAFGSGFKCNSAVWLSLHPPRQ 521          
BLAST of mRNA_E-fasciculatus_F_contig12994.2268.1 vs. uniprot
Match: A0A835YTW0_9STRA (3-ketoacyl-CoA synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTW0_9STRA)

HSP 1 Score: 255 bits (651), Expect = 1.060e-79
Identity = 123/185 (66.49%), Postives = 145/185 (78.38%), Query Frame = 1
Query:    1 RVQGAGRDAFEAVYESEDKLGHHGVRLSKEIVKVAGRAMEKNFTSLGPYVLPISEQYKVVKALALRKVTKAIREMLEKRKSSLAKKVPIIAYYQPDFKRGIDHFCIHAGGRGVIDGIEKNLALQEHHTEPSRATLRDYGNTSSSSIWYEMKYIEEHSDLRRGQRILQVAFGSGFKCNSAVWICLN 555
            R QG G DA+E V+E ED LGH GVRLSK+IV+VAG+AM+ NFT+LGP+VLP+SEQ   +K+ A + + + +  +LEKR  +LA KVP    Y PDFKRGIDHFCIHAGGRGVIDGIEK L L +  T PSR  L  YGNTSSSSIWYEM +I  + DL+RGQRILQVAFGSGFKCNSAVW+CLN
Sbjct:  330 RTQGEGLDAYECVFECEDDLGHRGVRLSKQIVEVAGKAMQDNFTALGPHVLPLSEQIPTIKSYAAKYLCRRLTRVLEKRNPALAAKVPRPRTYIPDFKRGIDHFCIHAGGRGVIDGIEKTLKLSQKQTLPSREALSRYGNTSSSSIWYEMDFILHNQDLKRGQRILQVAFGSGFKCNSAVWLCLN 514          
BLAST of mRNA_E-fasciculatus_F_contig12994.2268.1 vs. uniprot
Match: A0A7S2A0B6_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A0B6_TRICV)

HSP 1 Score: 246 bits (628), Expect = 1.100e-79
Identity = 118/187 (63.10%), Postives = 151/187 (80.75%), Query Frame = 1
Query:    1 RVQGAGRDAFEAVYESEDKLGHHGVRLSKEIVKVAGRAMEKNFTSLGPYVLPISEQYKVVKALALRKVTKAIREMLEKRKSSLAKKVPIIAYYQPDFKRGIDHFCIHAGGRGVIDGIEKNLALQEHHTEPSRATLRDYGNTSSSSIWYEMKYIEEH---SDLRRGQRILQVAFGSGFKCNSAVWICL 552
            RVQGAG DA++ V+E++DK G  GVRLSKEIVKVAG+ MEKN T +GPYVLP++EQ+KVV +L  R V K++R+ L ++ +S   K+P++ +Y PDFKRGIDHFCIHAGGR VIDGIEKN+ L+  HTEPSR TL +YGNTSSSSIWYE++YI+E    + L++G R++QVAFGSGFKC S VW+ L
Sbjct:   61 RVQGAGEDAYQCVFEAQDKDGKRGVRLSKEIVKVAGKCMEKNMTMIGPYVLPLTEQFKVVLSLLARFVIKSLRKSLGEKTAS---KLPVVKHYVPDFKRGIDHFCIHAGGRAVIDGIEKNMKLELFHTEPSRMTLLNYGNTSSSSIWYELEYIQEQQTTNPLKKGHRVMQVAFGSGFKCTSGVWLKL 244          
BLAST of mRNA_E-fasciculatus_F_contig12994.2268.1 vs. uniprot
Match: A0A7S4DBI7_HETAK (3-ketoacyl-CoA synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBI7_HETAK)

HSP 1 Score: 254 bits (649), Expect = 4.540e-79
Identity = 124/185 (67.03%), Postives = 144/185 (77.84%), Query Frame = 1
Query:    1 RVQGAGRDAFEAVYESEDKLGHHGVRLSKEIVKVAGRAMEKNFTSLGPYVLPISEQYKVVKALALRKVTKAIREMLEKRKSSLAKKVPIIAYYQPDFKRGIDHFCIHAGGRGVIDGIEKNLALQEHHTEPSRATLRDYGNTSSSSIWYEMKYIEEHSDLRRGQRILQVAFGSGFKCNSAVWICLN 555
            R QG G DA+ AV+E EDK GHHGVRLSKEIV VAGR ME+NFT+LGP VLP+SEQ KVV +L  R VTK ++        +    V +   Y PDFKRGIDHFCIHAGGR VI+GIEKN+ L ++HTE S+ATLRDYGNTSSSSIWYE+KYIEE  +L+RGQR+LQVAFGSGFKCNS VW+ L 
Sbjct:  370 RTQGMGEDAYNAVFECEDKEGHHGVRLSKEIVMVAGRTMERNFTTLGPLVLPLSEQAKVVLSLVARFVTKKLK--------AAGLGVGVARTYVPDFKRGIDHFCIHAGGRAVIEGIEKNMKLHDYHTEASKATLRDYGNTSSSSIWYELKYIEERMNLKRGQRVLQVAFGSGFKCNSCVWLSLK 546          
BLAST of mRNA_E-fasciculatus_F_contig12994.2268.1 vs. uniprot
Match: A0A7S0AVD4_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AVD4_9STRA)

HSP 1 Score: 243 bits (620), Expect = 4.580e-78
Identity = 121/189 (64.02%), Postives = 146/189 (77.25%), Query Frame = 1
Query:    1 RVQGAGRDAFEAVYESEDKLGHHGVRLSKEIVKVAGRAMEKNFTSLGPYVLPISEQYKVVKALALRKVTKAIREMLE--KRKSSLAKKVPIIAYYQPDFKRGIDHFCIHAGGRGVIDGIEKNLALQEHHTEPSRATLRDYGNTSSSSIWYEMKYIEEH---SDLRRGQRILQVAFGSGFKCNSAVWICL 552
            RVQG   DA+  VYE+EDK G  GVRLSKEIVKVAG+ MEKN T +GPYVLP+SEQ+KVV +L  R  TK++++ML        +A+K+P I  Y PDFKRGIDHFCIHAGGR VIDGIEKN+ L+  HTEPSR  L +YGNTSSSSIWYE++YI+EH   + L++G RI+QVAFGSGFKC S VW+ L
Sbjct:   85 RVQGTTEDAYNCVYETEDKDGERGVRLSKEIVKVAGKCMEKNMTMIGPYVLPLSEQFKVVISLIGRFATKSLKKMLGGGAANEKMAEKIPNIRPYVPDFKRGIDHFCIHAGGRAVIDGIEKNMKLELFHTEPSRMALLNYGNTSSSSIWYELEYIQEHQKTNPLKKGHRIMQVAFGSGFKCTSGVWLKL 273          
BLAST of mRNA_E-fasciculatus_F_contig12994.2268.1 vs. uniprot
Match: A0A7R9WIM4_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WIM4_9STRA)

HSP 1 Score: 239 bits (609), Expect = 1.160e-76
Identity = 121/189 (64.02%), Postives = 146/189 (77.25%), Query Frame = 1
Query:    1 RVQGAGRDAFEAVYESEDKLGHHGVRLSKEIVKVAGRAMEKNFTSLGPYVLPISEQYKVVKALALRKVTKAIREMLEKRKSS--LAKKVPIIAYYQPDFKRGIDHFCIHAGGRGVIDGIEKNLALQEHHTEPSRATLRDYGNTSSSSIWYEMKYIEEH---SDLRRGQRILQVAFGSGFKCNSAVWICL 552
            RVQG+   A  AVYE+ED  GH GVRLSK+IVKVAG+ MEKN T +GPYVLP+SEQ  VV +LA R V K +R  L+  K +  LA K+P++ +Y PDFKRGIDHFCIHAGGR VIDGIEKN+ L+  HTEPSR TL +YGNTSSSSIWYE++YI+E    + LR+G R++QVAFGSGFKC S VW+ L
Sbjct:   66 RVQGSTDAALGAVYETEDVNGHRGVRLSKDIVKVAGKCMEKNMTMIGPYVLPLSEQIPVVWSLAGRFVVKGLRGALKGSKKTGWLADKLPVVKHYVPDFKRGIDHFCIHAGGRAVIDGIEKNMKLELFHTEPSRMTLLNYGNTSSSSIWYELEYIQETQRTNPLRKGHRVMQVAFGSGFKCTSGVWLKL 254          
BLAST of mRNA_E-fasciculatus_F_contig12994.2268.1 vs. uniprot
Match: A0A7S2CUL9_9STRA (3-ketoacyl-CoA synthase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CUL9_9STRA)

HSP 1 Score: 238 bits (608), Expect = 2.890e-73
Identity = 114/190 (60.00%), Postives = 143/190 (75.26%), Query Frame = 1
Query:    1 RVQGAGRDAFEAVYESEDKLGHHGVRLSKEIVKVAGRAMEKNFTSLGPYVLPISEQYKVVKALALRKVTKAIREMLEKR-KSSLAKKVPIIAYYQPDFKRGIDHFCIHAGGRGVIDGIEKNLALQEHHTEPSRATLRDYGNTSSSSIWYEMKYIEEHSDLRRGQRILQVAFGSGFKCNSAVWICLNPPDR 567
            R QG   +++E V+E ED+ G+ GVRLSK+IVKVAGRAME+NFT+LGPYVLP+SE +KV KA   R V+K +R   EK   +S+   +P++  Y PDFKRGIDHFCIHAGGR V+DG+ +NL L +   EPSR TL  YGNTSSSSIWYE+ +I +  + RRG R+LQ+AFGSGFKCNSAVW+CL   D 
Sbjct:  317 RKQGIDDESYECVFECEDENGNRGVRLSKQIVKVAGRAMEQNFTALGPYVLPVSEIWKVAKATVARPVSKLLRAFFEKNGMTSVVAMIPLVKPYIPDFKRGIDHFCIHAGGRAVVDGVGQNLKLDDAQLEPSRHTLYHYGNTSSSSIWYELDHIRKSMNQRRGHRVLQLAFGSGFKCNSAVWLCLQDGDN 506          
BLAST of mRNA_E-fasciculatus_F_contig12994.2268.1 vs. uniprot
Match: A0A7S2WTL4_9STRA (3-ketoacyl-CoA synthase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTL4_9STRA)

HSP 1 Score: 237 bits (604), Expect = 1.170e-72
Identity = 111/186 (59.68%), Postives = 144/186 (77.42%), Query Frame = 1
Query:    1 RVQGAGRDAFEAVYESEDKLGHHGVRLSKEIVKVAGRAMEKNFTSLGPYVLPISEQYKVVKALALRKVTKAIREMLEKRK-SSLAKKVPIIAYYQPDFKRGIDHFCIHAGGRGVIDGIEKNLALQEHHTEPSRATLRDYGNTSSSSIWYEMKYIEEHSDLRRGQRILQVAFGSGFKCNSAVWICLN 555
            R+QG   +++E+V+E ED  G+HGVRLSK++  VAGRAME+N T+LGP+VLP+SE  KV +   LR +T+ +R  LEK + + LAK VP++A Y PDFKRGIDHFCIHAGGR V+D +  NL L E  T+PSR TL +YGNTSSSSIWYE+ +I  H   +RGQR+LQ++FGSGFKCN+AVW+CL 
Sbjct:  326 RLQGTDDESYESVFECEDSEGNHGVRLSKKVPDVAGRAMEQNLTALGPHVLPLSEMIKVGRVWGLRFLTRRLRVWLEKNQMTKLAKYVPVVAPYVPDFKRGIDHFCIHAGGRKVVDDVAANLKLSEDQTQPSRDTLYNYGNTSSSSIWYELSFIRHHMKQKRGQRVLQISFGSGFKCNTAVWLCLK 511          
BLAST of mRNA_E-fasciculatus_F_contig12994.2268.1 vs. uniprot
Match: A0A7S2I4J3_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I4J3_9STRA)

HSP 1 Score: 237 bits (604), Expect = 2.310e-72
Identity = 116/187 (62.03%), Postives = 147/187 (78.61%), Query Frame = 1
Query:    1 RVQGAGRDAFEAVYESEDKLGHHGVRLSKEIVKVAGRAMEKNFTSLGPYVLPISEQYKVVKALALRKVTKAIREMLEKRKSSLAKKVPIIAYYQPDFKRGIDHFCIHAGGRGVIDGIEKNLALQEHHTEPSRATLRDYGNTSSSSIWYEMKYIEEH---SDLRRGQRILQVAFGSGFKCNSAVWICL 552
            RVQG G DA++ VYE++D+ G+ GVRLSK+IVKVAG+ MEKN T+LGPYVLP+SEQ KVV +LA R   K +R  L ++   +A K+P    + PDFKRGIDHFCIHAGGR VIDGIEKN+ L++ HTEPSR TL ++GNTSSSSIWYE++YI+E    + L++G R++QVAFGSGFKC S VW+ L
Sbjct:  365 RVQGTGEDAYQCVYETQDEDGYRGVRLSKDIVKVAGKCMEKNMTTLGPYVLPLSEQIKVVFSLASRFFFKTLRRTLSEK---VAVKLPHPKVFVPDFKRGIDHFCIHAGGRAVIDGIEKNMKLEQFHTEPSRMTLLNHGNTSSSSIWYELEYIQEQQKTNPLKKGHRVMQVAFGSGFKCTSGVWLKL 548          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12994.2268.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTR7_ECTSI1.290e-12897.373-ketoacyl-CoA synthase n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2XYV1_9STRA2.010e-8971.963-ketoacyl-CoA synthase n=1 Tax=Fibrocapsa japonic... [more]
A0A835YTW0_9STRA1.060e-7966.493-ketoacyl-CoA synthase n=1 Tax=Tribonema minus Ta... [more]
A0A7S2A0B6_TRICV1.100e-7963.10Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S4DBI7_HETAK4.540e-7967.033-ketoacyl-CoA synthase n=1 Tax=Heterosigma akashi... [more]
A0A7S0AVD4_9STRA4.580e-7864.02Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A7R9WIM4_9STRA1.160e-7664.02Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S2CUL9_9STRA2.890e-7360.003-ketoacyl-CoA synthase n=1 Tax=Florenciella parvu... [more]
A0A7S2WTL4_9STRA1.170e-7259.683-ketoacyl-CoA synthase n=1 Tax=Rhizochromulina ma... [more]
A0A7S2I4J3_9STRA2.310e-7262.03Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12994contigE-fasciculatus_F_contig12994:47..3422 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score379.4
Seed ortholog evalue9.8e-103
Seed eggNOG ortholog2880.D8LTR7
KEGG rclassRC00004,RC02888,RC02997
KEGG koko:K15397
KEGG ReactionR09419,R10825
KEGG Pathwayko00062,ko01110,map00062,map01110
KEGG ModuleM00415
EggNOG free text desc.synthase
EggNOG OGs2QPKZ@2759,COG3424@1
EC2.3.1.199
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Exons5
Model size573
Cds size573
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12994.2268.1prot_E-fasciculatus_F_contig12994.2268.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig12994 47..3422 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927803.328043-CDS-E-fasciculatus_F_contig12994:46..2471622927803.328043-CDS-E-fasciculatus_F_contig12994:46..247Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12994 47..247 +
1695995701.325331-CDS-E-fasciculatus_F_contig12994:46..2471695995701.325331-CDS-E-fasciculatus_F_contig12994:46..247Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12994 47..247 +
1622927803.338992-CDS-E-fasciculatus_F_contig12994:1023..11201622927803.338992-CDS-E-fasciculatus_F_contig12994:1023..1120Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12994 1024..1120 +
1695995701.3459396-CDS-E-fasciculatus_F_contig12994:1023..11201695995701.3459396-CDS-E-fasciculatus_F_contig12994:1023..1120Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12994 1024..1120 +
1622927803.350799-CDS-E-fasciculatus_F_contig12994:1904..20461622927803.350799-CDS-E-fasciculatus_F_contig12994:1904..2046Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12994 1905..2046 +
1695995701.3637433-CDS-E-fasciculatus_F_contig12994:1904..20461695995701.3637433-CDS-E-fasciculatus_F_contig12994:1904..2046Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12994 1905..2046 +
1622927803.363831-CDS-E-fasciculatus_F_contig12994:2735..27961622927803.363831-CDS-E-fasciculatus_F_contig12994:2735..2796Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12994 2736..2796 +
1695995701.3725917-CDS-E-fasciculatus_F_contig12994:2735..27961695995701.3725917-CDS-E-fasciculatus_F_contig12994:2735..2796Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12994 2736..2796 +
1622927803.3776968-CDS-E-fasciculatus_F_contig12994:3350..34221622927803.3776968-CDS-E-fasciculatus_F_contig12994:3350..3422Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12994 3351..3422 +
1695995701.3810663-CDS-E-fasciculatus_F_contig12994:3350..34221695995701.3810663-CDS-E-fasciculatus_F_contig12994:3350..3422Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12994 3351..3422 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig12994.2268.1

>prot_E-fasciculatus_F_contig12994.2268.1 ID=prot_E-fasciculatus_F_contig12994.2268.1|Name=mRNA_E-fasciculatus_F_contig12994.2268.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=191bp
RVQGAGRDAFEAVYESEDKLGHHGVRLSKEIVKVAGRAMEKNFTSLGPYV
LPISEQYKVVKALALRKVTKAIREMLEKRKSSLAKKVPIIAYYQPDFKRG
IDHFCIHAGGRGVIDGIEKNLALQEHHTEPSRATLRDYGNTSSSSIWYEM
KYIEEHSDLRRGQRILQVAFGSGFKCNSAVWICLNPPDRK*
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mRNA from alignment at E-fasciculatus_F_contig12994:47..3422+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig12994.2268.1 ID=mRNA_E-fasciculatus_F_contig12994.2268.1|Name=mRNA_E-fasciculatus_F_contig12994.2268.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3376bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12994:47..3422+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CGCGTCCAGGGAGCGGGCAGAGACGCGTTCGAGGCGGTGTACGAGTCTGA GGACAAGCTGGGGCACCACGGCGTCCGTCTCTCCAAGGAGATCGTGAAGG TGGCCGGTCGCGCGATGGAGAAGAACTTCACCTCCCTGGGACCTTACGTG CTGCCCATCTCGGAGCAGTACAAGGTGGTGAAGGCTCTTGCCCTCCGCAA GGTTAGTGTTATTTGAGCCCGTACTTGAGGAGAAGTCTGCGGTCAAGAAG TTGTTTAGCCTGGAACAACTCAATAGAGCACCATATTTGTGATCCAGGTT AAGAACCTCTACTCTCAAAAAACTATATAGCGGCATGCGTACATAGCATA ACCCTAGGAAATTCTGCTGTAAGAACCTCAGCCTCGGCCATAACTACAAG TCTCTTGTGCAGGCGTTTGCTTTAGGGTAGTGTGCCGTTTGCGCTGGTGT TCGTGATGCTGGGAAATGTGCGCGTCGGTTGGACCGGTAGGGGCGTTTTG GAGAACGTTCTGGAGAACGTTCTGGAGAAGGTTCTGATGAGCAAAGACCG GGGCGGTTTGTTTTTGTGAAGACGGCGACGATGATGACAGCAATACTGCC TCACGAACAGAAGCAATAACTACGAAACAACTAGACTCCTTTTACACAAC TGGTCTGGGTCCCAACCTTTTTTGAAAGGCTCGCGGCTGGCTAGGTGTCC TTGACGACGGTCCTCACTCGAGAGGATGGACGGTGCCGCTGATTGCTCCA AGTTTTTTGTTTCGTTTTCTTGGTATAAAAGAAAAAAAAATATCGTGAGC ACGAGGGCAATCTAGTACGGTAGCGGATTTTCCGGGGCCCCGTGGTTCCG CTAAATTGCAGGAAATAGGGTGGTATGTATGAGTGAACGTGAGTCATCCC GCATCTTGTTTCGTGCACTTTCGTCTTGTGTATGCATCTGATATGCGTTG GGTTTCCTTGTTTTCTGGTACATGTAGGTGACGAAGGCGATCAGAGAGAT GCTGGAGAAGCGCAAGAGCTCGCTGGCGAAGAAGGTGCCGATCATCGCCT ACTACCAGCCGGACTTCAAGCGCGGTGAGAGCGGAGCGCACACCCTTATC ATGTCCTTCGTCCTGTTCTTCTTTTTTTTTGCTGCTCCGCCCTTTGTTGT TCGTTTTGTGGCATCTGCTACGGTACAGTTTAAGCGTGTCTGTGAGGTGG TCCCCACTGTCGATTGATTGGTCTACCTCCACATTCTGCCTTGTTGATGT CTTGCTGGGGGCATCTGCGGATAGCAAGCATGCACGTCATGCCCCCTCCC CACACACACACACACGCCCCGCGGACGACCTGTTTGTGAAGCAAGACATC CGTGGCTCCCGTTAGAGACAGACGCTTTACAGGAATGACGGGAGTGACTT GTCCACCCACGCTGATAGATGTTCCGGTGTTGCCGCTTTTTCTTTTCGTT TGCAACTAGAAGGATAGTACTAGCTGTGGCTTGCACACGCGGGTGCTCGA AGTTCGCGCTGTTTGTCTGTCACAGCGGGGGGTGTTCTGTAAAAGAAGAA AGAGCAAAACGGGAAGCGGTTTCAGTGAAAGTTTTGCTCGGCGTTGTGAG TTTGACCGAGGACGGTGAGTTAACCTAAATAGGCGTGCCCAGAAAAAACG CAAGAGATGGATAAGAACACAAGAAGCGGTTTTTCGAAAGGGATCACCCC TCCTTCGTGCAAGCACGAGTGGCACTACGACGACCCCAAGATCTCCTGAT AGAGAGCAGTACCCGGTGCCGTGGTCGTCATTGTCATTGTTATTGTTTGA CACGCGTGTTGTTACCGTACCGCTGGTTGTTGTTATGTCATGTTACCGTT GAAACCAGGTATTGATCACTTCTGCATCCACGCGGGGGGACGGGGCGTGA TCGACGGCATCGAGAAGAACTTGGCGCTACAGGAGCACCACACGGAGCCG TCCCGTGCCACGCTCCGGGATTACGGCAACACCTCGTCCTCTTCCATCTG GTGCGTCGTCGTCTTTGTCGTCTGTTCTGCATAATTCGCGCTCGCTCATA GATTACATCTTGGCCTGCTGCTTGCTGCCTTTGTGTGTGCCCCACCCATC GAAGCGGTAGGTTCCCTCAACGTCTTGTTTTGGTTTGCATGACGACGTGC TTCGTCCCCCTCCACCCGATGCGTTGCCTTTTTTTTTTTAATGTAAACAT TGGAGCACGGGTAGTTTCGCACCATTCATGAGTGTGCTTTGGTCGAAGCA TGTGTGTGCGTGTGCGTTTTTTTTACACCTTTTTTTTTTGTGGGTTTTTT ACATCTTGTTTTGCGTTTTTTTTTCTCGTCACCGCTTCGTATTCACACGA TACTTACTTGTAGATGCTACCCTGGAGGATGACTTGACACTACCGTCTGT ACATCGGTTGGCGTGTTTCATGGATCGCGGGCCTAAATTGTGCCACGCCT CTTGGAGGTTCCTTCCTCCCTTTTTTTTTCGTTCTTGCGTGTTCATGAAT ACAGACCTCGTCCATCTGGTGTCCCTTGCCCAATCTCGAAGCAGCTATTA GTAGCACGACAGCGTTGAGCGGTTCATCGATCCCTGCGTCTCTGCCAATG CCAATGGGACTATTTGTAGCTTGTGGTATGATTTGAACTCTTGTTTTTCC CTACCCCCCTGTGGTGTGAAAACGCGAAACATTTGCCAGGTACGAGATGA AGTACATCGAGGAGCACTCGGACCTCAGGCGGGGCCAGCGCATCCTGCAG GTGAGATGTTTCCACTTCCACACACACCCGACTCCTTGTTGTTGTTGCCC GCTGTTGCTGTTGATGGTGGTGGTGTCAAGTGTTGTTGTTGTTGTTGTTG TGGCCTGTTGTCTGTGTACGAGGTCTTTGGCCTGTTGCTGTTGTCACCTT TTGTTCTTGTTGCTCATGCCGTGCTTATGTTCTTCGAAACGAAAACCGTG CCGCCGTTTGGGACAACATGTTGGCATGATTCATGATCCAGTACTGTATG GGCACCAATCTGCACGACACCTTTCGGCATAGGTTTCGCGTACCAGGTCA CCGCGCATGTATGCATACGATACGACGTGTCACTATGCCATTTGTTAGCG AAAGGGGGCGGTTGATCCTCCACAAAACATCACCCAAAACCAAGGCTTCA GTTTCCCCTCGCCTCCCCGTTTAGAGGTCTTTCTTTTTTTTCTCTTTGTC AAAACACTTTTTATTGAGCGCTTGCAGCGTTTCCGCCGGGTAGGAGCTTC ATTCCATGGTCACACGAACTCTCTTTGTCACTCTGCAACGCGGGAAAAAA CCAGGTGGCTTTCGGCAGTGGGTTCAAGTGCAATTCCGCTGTGTGGATCT GCCTCAATCCTCCGGACCGCAAGTAG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12994:47..3422+

>mRNA_E-fasciculatus_F_contig12994.2268.1 ID=mRNA_E-fasciculatus_F_contig12994.2268.1|Name=mRNA_E-fasciculatus_F_contig12994.2268.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1146bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12994:47..3422+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CGCGTCCAGGGAGCGGGCAGAGACGCGTTCGAGGCGGTGTACGAGTCTGA
GGACAAGCTGGGGCACCACGGCGTCCGTCTCTCCAAGGAGATCGTGAAGG
TGGCCGGTCGCGCGATGGAGAAGAACTTCACCTCCCTGGGACCTTACGTG
CTGCCCATCTCGGAGCAGTACAAGGTGGTGAAGGCTCTTGCCCTCCGCAA
GCGCGTCCAGGGAGCGGGCAGAGACGCGTTCGAGGCGGTGTACGAGTCTG
AGGACAAGCTGGGGCACCACGGCGTCCGTCTCTCCAAGGAGATCGTGAAG
GTGGCCGGTCGCGCGATGGAGAAGAACTTCACCTCCCTGGGACCTTACGT
GCTGCCCATCTCGGAGCAGTACAAGGTGGTGAAGGCTCTTGCCCTCCGCA
AGGTGACGAAGGCGATCAGAGAGATGCTGGAGAAGCGCAAGAGCTCGCTG
GCGAAGAAGGTGCCGATCATCGCCTACTACCAGCCGGACTTCAAGCGCGG
TGACGAAGGCGATCAGAGAGATGCTGGAGAAGCGCAAGAGCTCGCTGGCG
AAGAAGGTGCCGATCATCGCCTACTACCAGCCGGACTTCAAGCGCGGTAT
TGATCACTTCTGCATCCACGCGGGGGGACGGGGCGTGATCGACGGCATCG
AGAAGAACTTGGCGCTACAGGAGCACCACACGGAGCCGTCCCGTGCCACG
CTCCGGGATTACGGCAACACCTCGTCCTCTTCCATCTGGTATTGATCACT
TCTGCATCCACGCGGGGGGACGGGGCGTGATCGACGGCATCGAGAAGAAC
TTGGCGCTACAGGAGCACCACACGGAGCCGTCCCGTGCCACGCTCCGGGA
TTACGGCAACACCTCGTCCTCTTCCATCTGGTACGAGATGAAGTACATCG
AGGAGCACTCGGACCTCAGGCGGGGCCAGCGCATCCTGCAGGTACGAGAT
GAAGTACATCGAGGAGCACTCGGACCTCAGGCGGGGCCAGCGCATCCTGC
AGGTGGCTTTCGGCAGTGGGTTCAAGTGCAATTCCGCTGTGTGGATCTGC
CTCAATCCTCCGGACCGCAAGTAGGTGGCTTTCGGCAGTGGGTTCAAGTG
CAATTCCGCTGTGTGGATCTGCCTCAATCCTCCGGACCGCAAGTAG
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