prot_E-fasciculatus_F_contig12987.2262.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12987.2262.1
Unique Nameprot_E-fasciculatus_F_contig12987.2262.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length131
Homology
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BLAST of mRNA_E-fasciculatus_F_contig12987.2262.1 vs. uniprot
Match: A0A6H5JK59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK59_9PHAE)

HSP 1 Score: 217 bits (553), Expect = 5.030e-63
Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 0 
Query:   24 GGTGGSNSWVYMSKAWALKWATSAYPGPVSNHHVVCRHGRVKPNVGVKRATKEMVAVPRGVHRSLVNRYGPRTPAVVAGKPSPLDATTGGVKVAVAPGESADRISVGR 131
            GGTGGSNSWVYMSKAWALKWATSAYPGPVSNHHVVCRHGRVKPNVGVKRA KEMVAVPRGVHRSLVNRYGPRTPAVVAGKPSPLDATTGGVKVAVAPGESADRISVGR
Sbjct:  856 GGTGGSNSWVYMSKAWALKWATSAYPGPVSNHHVVCRHGRVKPNVGVKRAAKEMVAVPRGVHRSLVNRYGPRTPAVVAGKPSPLDATTGGVKVAVAPGESADRISVGR 963
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BLAST of mRNA_E-fasciculatus_F_contig12987.2262.1 vs. uniprot
Match: D8LS72_ECTSI (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS72_ECTSI)

HSP 1 Score: 114 bits (286), Expect = 4.870e-27
Identity = 60/63 (95.24%), Postives = 60/63 (95.24%), Query Frame = 0 
Query:   69 GVKRATKEMVAVPRGVHRSLVNRYGPRTPAVVAGKPSPLDATTGGVKVAVAPGESADRISVGR 131
            G   ATKEMVAVPRGVHRSLVNRYGPRTPAVVAGKPSPLDATTGGVKVAVAPGESADRISVGR
Sbjct:  863 GSNSATKEMVAVPRGVHRSLVNRYGPRTPAVVAGKPSPLDATTGGVKVAVAPGESADRISVGR 925
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12987.2262.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JK59_9PHAE5.030e-6399.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LS72_ECTSI4.870e-2795.24Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ecto... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035927DUSP-like superfamilySUPERFAMILY143791DUSP-likecoord: 29..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12987contigE-fasciculatus_F_contig12987:9..750 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12987.2262.1mRNA_E-fasciculatus_F_contig12987.2262.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12987 9..752 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12987.2262.1 ID=prot_E-fasciculatus_F_contig12987.2262.1|Name=mRNA_E-fasciculatus_F_contig12987.2262.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=131bp
RRASVTRRRKGRGRRPGSESESEGGTGGSNSWVYMSKAWALKWATSAYPG
PVSNHHVVCRHGRVKPNVGVKRATKEMVAVPRGVHRSLVNRYGPRTPAVV
AGKPSPLDATTGGVKVAVAPGESADRISVGR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035927DUSP-like_sf