mRNA_E-fasciculatus_F_contig1298.2254.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1298.2254.1 vs. uniprot
Match: D7FLS7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLS7_ECTSI) HSP 1 Score: 163 bits (412), Expect = 7.180e-49 Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 1
Query: 229 MAQPGRSPEVDAELKKLQGVQSELQALAASRSQFYQQANENGMVKQELDLLEDEAPVFKLVGPVLIKQDLEEAKQNVAKRLELIEREM 492
MAQPGRSPEVDAELKKLQGVQSELQALAASRSQFYQQANENGMVKQELDLLEDEAPVFKLVGPVLIKQDLEEAKQNVAKRLELIEREM
Sbjct: 1 MAQPGRSPEVDAELKKLQGVQSELQALAASRSQFYQQANENGMVKQELDLLEDEAPVFKLVGPVLIKQDLEEAKQNVAKRLELIEREM 88
BLAST of mRNA_E-fasciculatus_F_contig1298.2254.1 vs. uniprot
Match: A0A7S2Y415_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y415_9STRA) HSP 1 Score: 101 bits (252), Expect = 1.250e-24 Identity = 50/80 (62.50%), Postives = 67/80 (83.75%), Query Frame = 1
Query: 253 EVDAELKKLQGVQSELQALAASRSQFYQQANENGMVKQELDLLEDEAPVFKLVGPVLIKQDLEEAKQNVAKRLELIEREM 492
EV+AE++K + + +E+Q L R + YQQANENGMVKQELDLL+ PV+K++GPVL+KQDL+EA+ NVAKRL+LI+REM
Sbjct: 7 EVEAEVEKYKALNAEIQELMEKRQKTYQQANENGMVKQELDLLDSTTPVYKMIGPVLMKQDLDEARDNVAKRLDLIQREM 86
BLAST of mRNA_E-fasciculatus_F_contig1298.2254.1 vs. uniprot
Match: F0WAV7_9STRA (Uncharacterized protein AlNc14C48G3819 n=2 Tax=Albugo TaxID=65356 RepID=F0WAV7_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 1.860e-22 Identity = 50/83 (60.24%), Postives = 61/83 (73.49%), Query Frame = 1
Query: 247 SPEVDAELKKLQGVQSELQALAASRSQFYQQANENGMVKQELDLLEDEAPVFKLVGPVLIKQDLEEAKQNVAKRLELIEREMY 495
S VD E K +Q ELQ L A + ++ QQANEN MVKQELDL+ DE V+K+VGPVL+KQDLEEAK NV KR+E I+ E+Y
Sbjct: 2 SKRVDVETAKYHVLQEELQVLVAQQQKYRQQANENNMVKQELDLVHDETKVYKMVGPVLLKQDLEEAKTNVNKRIEFIKHELY 84
BLAST of mRNA_E-fasciculatus_F_contig1298.2254.1 vs. uniprot
Match: A0A3F2RF90_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A3F2RF90_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 4.040e-22 Identity = 49/80 (61.25%), Postives = 64/80 (80.00%), Query Frame = 1
Query: 253 EVDAELKKLQGVQSELQALAASRSQFYQQANENGMVKQELDLLEDEAPVFKLVGPVLIKQDLEEAKQNVAKRLELIEREM 492
+V+AE+ + + +Q E+Q LAA R + QQANEN MVK+ELDLL++EA VFKLVGPVL+KQD++EAK NV KRLE I E+
Sbjct: 7 QVEAEMTRYRALQDEVQVLAAQRQTYAQQANENDMVKKELDLLDEEAKVFKLVGPVLLKQDVDEAKTNVNKRLEFINNEL 86
BLAST of mRNA_E-fasciculatus_F_contig1298.2254.1 vs. uniprot
Match: A0A5D6XI54_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XI54_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 4.150e-22 Identity = 49/80 (61.25%), Postives = 63/80 (78.75%), Query Frame = 1
Query: 253 EVDAELKKLQGVQSELQALAASRSQFYQQANENGMVKQELDLLEDEAPVFKLVGPVLIKQDLEEAKQNVAKRLELIEREM 492
+VDAE+ + + +Q E+Q LA R Q+ QQANEN MVK+ELDLL D+A VFKL+GPVL+KQD++EAK NV KRLE I E+
Sbjct: 8 QVDAEMARYRVLQEEVQVLATQRQQYAQQANENTMVKKELDLLSDDAKVFKLIGPVLLKQDVDEAKANVNKRLEFINNEL 87
BLAST of mRNA_E-fasciculatus_F_contig1298.2254.1 vs. uniprot
Match: H3GRS3_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GRS3_PHYRM) HSP 1 Score: 93.6 bits (231), Expect = 1.610e-21 Identity = 48/80 (60.00%), Postives = 63/80 (78.75%), Query Frame = 1
Query: 253 EVDAELKKLQGVQSELQALAASRSQFYQQANENGMVKQELDLLEDEAPVFKLVGPVLIKQDLEEAKQNVAKRLELIEREM 492
+V+AE+ + + +Q E+Q LA+ R + QQANENGMVK EL+LL+DEA V+KLVGPVL+KQD +EAK NV KRLE I E+
Sbjct: 7 QVEAEMTRYRALQDEVQVLASQRQTYAQQANENGMVKTELELLDDEARVYKLVGPVLLKQDADEAKTNVNKRLEFINNEL 86
BLAST of mRNA_E-fasciculatus_F_contig1298.2254.1 vs. uniprot
Match: D0NCV8_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NCV8_PHYIT) HSP 1 Score: 93.6 bits (231), Expect = 1.610e-21 Identity = 48/80 (60.00%), Postives = 61/80 (76.25%), Query Frame = 1
Query: 253 EVDAELKKLQGVQSELQALAASRSQFYQQANENGMVKQELDLLEDEAPVFKLVGPVLIKQDLEEAKQNVAKRLELIEREM 492
+VD E+ + + +Q E+Q LA R + QQANEN MVK+ELDLL+DEA V+KLVGPVL+KQD +EAK NV KRLE I E+
Sbjct: 7 QVDTEMARYRALQDEVQVLATQRQTYAQQANENDMVKKELDLLDDEAKVYKLVGPVLLKQDADEAKSNVNKRLEFINNEL 86
BLAST of mRNA_E-fasciculatus_F_contig1298.2254.1 vs. uniprot
Match: A0A484DUJ8_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DUJ8_BRELC) HSP 1 Score: 93.6 bits (231), Expect = 1.610e-21 Identity = 47/85 (55.29%), Postives = 65/85 (76.47%), Query Frame = 1
Query: 238 PGRSPEVDAELKKLQGVQSELQALAASRSQFYQQANENGMVKQELDLLEDEAPVFKLVGPVLIKQDLEEAKQNVAKRLELIEREM 492
PG+ +V+ ++ + +G+Q E+Q LA R + QQANEN MVK ELDLL DEA VFKLVGP+L+KQ+++EAK NV KRLE I +++
Sbjct: 2 PGQKEQVEEDMARYRGLQEEVQELAKQRQMYAQQANENEMVKVELDLLNDEAKVFKLVGPILLKQEVDEAKSNVNKRLEFISQKL 86
BLAST of mRNA_E-fasciculatus_F_contig1298.2254.1 vs. uniprot
Match: A0A835ZF83_9STRA (Prefoldin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF83_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 2.610e-21 Identity = 50/85 (58.82%), Postives = 63/85 (74.12%), Query Frame = 1
Query: 238 PGRSPEVDAELKKLQGVQSELQALAASRSQFYQQANENGMVKQELDLLEDEAPVFKLVGPVLIKQDLEEAKQNVAKRLELIEREM 492
P + VD ELK+ Q +Q EL + R+Q YQQANENGMVKQEL+LL+ VFK++ PVL+KQDL+EAK NVAKR+E I+ EM
Sbjct: 5 PAPTRAVDVELKRYQELQDELTQFSQVRNQLYQQANENGMVKQELELLKPGTKVFKMITPVLLKQDLDEAKVNVAKRIEFIQGEM 89
BLAST of mRNA_E-fasciculatus_F_contig1298.2254.1 vs. uniprot
Match: A0A6V1PDA7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PDA7_HETAK) HSP 1 Score: 92.8 bits (229), Expect = 4.100e-21 Identity = 48/80 (60.00%), Postives = 59/80 (73.75%), Query Frame = 1
Query: 253 EVDAELKKLQGVQSELQALAASRSQFYQQANENGMVKQELDLLEDEAPVFKLVGPVLIKQDLEEAKQNVAKRLELIEREM 492
+VD E + + + S+LQ L R QFY ANENGMV QELDLL D+A VFK++GPVLIKQDL EAK NV KRL+ I+ +M
Sbjct: 7 QVDKEFENYKSINSDLQELMFKRQQFYSSANENGMVAQELDLLADDAQVFKMLGPVLIKQDLAEAKDNVTKRLDFIQDQM 86 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1298.2254.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1298.2254.1 >prot_E-fasciculatus_F_contig1298.2254.1 ID=prot_E-fasciculatus_F_contig1298.2254.1|Name=mRNA_E-fasciculatus_F_contig1298.2254.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=165bp HSITTAARTLATARTPCLDGKVAFKLVFVGIISKPGEEVGQPSGSSICCTback to top mRNA from alignment at E-fasciculatus_F_contig1298:4146..6201+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1298.2254.1 ID=mRNA_E-fasciculatus_F_contig1298.2254.1|Name=mRNA_E-fasciculatus_F_contig1298.2254.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2056bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1298:4146..6201+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1298:4146..6201+ >mRNA_E-fasciculatus_F_contig1298.2254.1 ID=mRNA_E-fasciculatus_F_contig1298.2254.1|Name=mRNA_E-fasciculatus_F_contig1298.2254.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=990bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1298:4146..6201+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |