prot_E-fasciculatus_F_contig12941.2230.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12941.2230.1
Unique Nameprot_E-fasciculatus_F_contig12941.2230.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length166
Homology
BLAST of mRNA_E-fasciculatus_F_contig12941.2230.1 vs. uniprot
Match: D8LGZ8_ECTSI (Tub domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGZ8_ECTSI)

HSP 1 Score: 239 bits (611), Expect = 6.540e-73
Identity = 160/165 (96.97%), Postives = 162/165 (98.18%), Query Frame = 0
Query:    1 MVDSGLLAEGLRRWEKTGVVPPGMIVLRSKQPKWSAWQGCHTLDFDRGGERVREPSRKNVSMVAVDASPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDHPDGHHHRPSITAASRATLQVGKISEDHFSLDFCWPLSPLQAFVAAMSIFDG 165
            MVDSGLLAEGLR+WEKTGVVPPGMIVLRSKQPKWSAWQGCHTLDFDRGGERVREPSRKNVSM+A DASPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDH DGHHHRPSITAASR TLQVGKISEDHFSLDFCWPLSPLQAFVAAMSIFDG
Sbjct:  483 MVDSGLLAEGLRKWEKTGVVPPGMIVLRSKQPKWSAWQGCHTLDFDRGGERVREPSRKNVSMIAADASPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDHTDGHHHRPSITAASRPTLQVGKISEDHFSLDFCWPLSPLQAFVAAMSIFDG 647          
BLAST of mRNA_E-fasciculatus_F_contig12941.2230.1 vs. uniprot
Match: A0A6H5KJG2_9PHAE (Tub domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJG2_9PHAE)

HSP 1 Score: 236 bits (602), Expect = 7.090e-71
Identity = 136/165 (82.42%), Postives = 140/165 (84.85%), Query Frame = 0
Query:    1 MVDSGLLAEGLRRWEKTGVVPPGMIVLRSKQPKWSAWQGCHTLDFDRGGERVREPSRKNVSMVAVDASPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDHPDGHHHRPSITAASRATLQVGKISEDHFSLDFCWPLSPLQAFVAAMSIFDG 165
            MVDSGLLAEGLR+WEK GVVPPGMIVLRSKQPKWSAWQGCHTLDFDRGGERVREPSRKNVSMVA DASPAXXXXXXXXXXXXXXXXXXX                      KDH +GHHHRPSITAAS++TLQVGKISEDHFSLDFCWPLSPLQAFVAAMSIFDG
Sbjct:  575 MVDSGLLAEGLRKWEKAGVVPPGMIVLRSKQPKWSAWQGCHTLDFDRGGERVREPSRKNVSMVAADASPAXXXXXXXXXXXXXXXXXXXAGRGNRAGGGTNSEAQQTGGGDKDHAEGHHHRPSITAASKSTLQVGKISEDHFSLDFCWPLSPLQAFVAAMSIFDG 739          
BLAST of mRNA_E-fasciculatus_F_contig12941.2230.1 vs. uniprot
Match: A0A835YQA2_9STRA (Tub domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQA2_9STRA)

HSP 1 Score: 110 bits (275), Expect = 3.280e-25
Identity = 61/163 (37.42%), Postives = 81/163 (49.69%), Query Frame = 0
Query:    3 DSGLLAEGLRRWEKTGVVPPGMIVLRSKQPKWSAWQGCHTLDFDRGGERVREPSRKNVSMVAVDASPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDHPDGHHHRPSITAASRATLQVGKISEDHFSLDFCWPLSPLQAFVAAMSIFDG 165
            D   L   L+     G  PPG ++L+SK+P+WSAWQGCHTL F+RG +RVREPSRKN+S+V    + A                                             D    +     ++   LQ+GK+++D+FSLDF +PLSP QAFV AMS FDG
Sbjct:  391 DEASLLAVLQLATAAGAPPPGFLLLQSKKPRWSAWQGCHTLCFERGAQRVREPSRKNISVVLAPGASASRGELAGKGAAAVASAW----------------------------DMDDQQSEALRSAPVVLQMGKLADDYFSLDFNYPLSPFQAFVLAMSAFDG 525          
BLAST of mRNA_E-fasciculatus_F_contig12941.2230.1 vs. uniprot
Match: A0A4D9CTJ8_9STRA (Tub domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CTJ8_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 6.620e-6
Identity = 40/154 (25.97%), Postives = 58/154 (37.66%), Query Frame = 0
Query:   21 PPGMIVLRSKQPKWSAWQGCHTLDFDRGGERVREPSRKNVSMVAVDASPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDHPDGHHHRPSITAAS----------RATLQVGKISEDHFSLDFCWPLSPLQAFVAAMSIFD 164
            PP ++ L S+ P W   +G H LDF+ G +R+  PSRKN+++V   AS                                                    R  +  A+          R   Q+GK+SED +SLDF  P SP QA   A++  +
Sbjct:  452 PPRVLTLHSQPPAWDPDRGLHALDFEMGEQRMPLPSRKNLAVVEATASSLQDYAAGLTEVRASGHRAEGGSGARRRGRTAVRSRIGLSHLGGGIGLRRGERSGVDDAAASEWGTLERPRFACQLGKLSEDAYSLDFREPFSPFQALAVAVAALE 605          
BLAST of mRNA_E-fasciculatus_F_contig12941.2230.1 vs. uniprot
Match: A0A7S2V1J1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1J1_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 2.940e-5
Identity = 20/36 (55.56%), Postives = 27/36 (75.00%), Query Frame = 0
Query:  129 RATLQVGKISEDHFSLDFCWPLSPLQAFVAAMSIFD 164
            R  +Q G+I+ + FS+DFCWPLSPLQAF  ++S  D
Sbjct:   85 RLFMQFGRIAHNQFSMDFCWPLSPLQAFAISLSSLD 120          
BLAST of mRNA_E-fasciculatus_F_contig12941.2230.1 vs. uniprot
Match: A0A482R6S1_9EURY (Tub domain-containing protein n=1 Tax=Methanosarcinales archaeon TaxID=2250255 RepID=A0A482R6S1_9EURY)

HSP 1 Score: 49.7 bits (117), Expect = 3.100e-5
Identity = 22/42 (52.38%), Postives = 27/42 (64.29%), Query Frame = 0
Query:  123 SITAASRATLQVGKISEDHFSLDFCWPLSPLQAFVAAMSIFD 164
            S  A     LQ G++S D F++DF WPLSPLQAF   +S FD
Sbjct:   20 SPDAQDSVLLQFGRVSTDEFTMDFQWPLSPLQAFQICLSSFD 61          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12941.2230.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LGZ8_ECTSI6.540e-7396.97Tub domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KJG2_9PHAE7.090e-7182.42Tub domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835YQA2_9STRA3.280e-2537.42Tub domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A4D9CTJ8_9STRA6.620e-625.97Tub domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A7S2V1J1_9STRA2.940e-555.56Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A482R6S1_9EURY3.100e-552.38Tub domain-containing protein n=1 Tax=Methanosarci... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000007Tubby, C-terminalPFAMPF01167Tubcoord: 24..164
e-value: 2.9E-19
score: 69.8
NoneNo IPR availablePANTHERPTHR16517TUBBY-RELATEDcoord: 24..164
NoneNo IPR availablePANTHERPTHR16517:SF7PROTEIN KING TUBBYcoord: 24..164
IPR025659Tubby-like, C-terminalSUPERFAMILY54518Tubby C-terminal domain-likecoord: 23..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12941contigE-fasciculatus_F_contig12941:1264..3572 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12941.2230.1mRNA_E-fasciculatus_F_contig12941.2230.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12941 151..3790 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12941.2230.1 ID=prot_E-fasciculatus_F_contig12941.2230.1|Name=mRNA_E-fasciculatus_F_contig12941.2230.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=166bp
MVDSGLLAEGLRRWEKTGVVPPGMIVLRSKQPKWSAWQGCHTLDFDRGGE
RVREPSRKNVSMVAVDASPAAAAAAVGGGGKQGKSAAPVAGRGSRAGGGT
NSEAQQTGGGDKDHPDGHHHRPSITAASRATLQVGKISEDHFSLDFCWPL
SPLQAFVAAMSIFDG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025659Tubby-like_C
IPR000007Tubby_C