mRNA_E-fasciculatus_F_contig1293.2220.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1293.2220.1
Unique NamemRNA_E-fasciculatus_F_contig1293.2220.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig1293.2220.1 vs. uniprot
Match: A0A6H5KQM2_9PHAE (DNA polymerase kappa n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KQM2_9PHAE)

HSP 1 Score: 885 bits (2288), Expect = 0.000e+0
Identity = 505/595 (84.87%), Postives = 526/595 (88.40%), Query Frame = 1
Query:  235 MFVFSNNKAGMGSVDKERVNRIIYEMSKNSSYFKQAKLQDDKLDQK----------VAEMRVKLRALDAVRKAQLTRQADKIATELERQRQLDEVCLVIDMDMFYAAVEVRDRPELADKPVAVGGESMISTTNYHARLKGVRSAMPGFIGRKLCPELVFVKPDYEKYTVVAEQIREIFREYDPRMRSYSLDEAYLNVTRVLTERLGLDGSNAPAGTKEAGVAAAAARAAAAVTPEHVCSGTYEAEADTSRRRSMGSSV---ENMYYGHEEDEEEARDGRSGERRSPRETRRVRLFEAARTLAEEIRARIREATKLTASVGIGPNFMLAKIASDWNKPDGQMCIGGDRAEVLRFLHDLPVRKIGGVGKVQEKCLREALGVVTCGDLFRERASVIHVMTSHTSRWLIKASLGIASADHDVATEQAQAVGAVTRKQISKERTFGELSAPRDLLNKCREICDSLAAEMATKGLEAKXXXXXXXXXXXXXXTQDSTGHAYVSSADDLFSAASALLQREIQGAAA-SAPGGKLRLRLMGVKASGFRGQAGAPILPGQATLDGFLSSKAAQGGCQGEDGSGNDGKRQQREGDMDTAAGVKQQ 1977
            MFVFSNNKAGMGSVDKE+VN IIYEMSKNSSYFKQAKLQDDKLDQK          VAEM+VKL+AL  VRKAQLTRQADKIATELE QRQLD+VCLVIDMDMFYAAVEVRDRPELADKPVAVGGESMISTTNYHARLKGVRSAMPGFIGRKLCPELVFVKPDYEKYTVVAEQIREIFREYDPRMR+YSLDEAYLNVT+VL ERLGLDGSNAPAGTKEAGVAA+AA A A   PEHVCS TYEAEADTSRRR MGS+V   E  Y G EEDEEEARDGRS E+R+PRETRR+RLFEAAR LAEEIRARIREATKLTASVGIGPNFMLAKIASDWNKPDGQMCIGGDRAEVLRFLHDLPVRKIGGVGKVQEKCLREALGVVTCGDLFRER +VIHVMT HTSRWLIKA                            KERTFGELSAPRDLL+KCREICDSLAAEMATKGLEAKXXXXXXXXXXXXXXTQDSTGHAYVSSADDLFSAASALLQREIQGAAA SAPGGKLRLRL+GV+ASGFRGQAGAP+LPGQATLDGFLSSKAA+GGCQG D SGND  RQ+R+  +DTA GV+QQ
Sbjct:    1 MFVFSNNKAGMGSVDKEKVNHIIYEMSKNSSYFKQAKLQDDKLDQKACIMRVLNVAVAEMKVKLKALGGVRKAQLTRQADKIATELEAQRQLDDVCLVIDMDMFYAAVEVRDRPELADKPVAVGGESMISTTNYHARLKGVRSAMPGFIGRKLCPELVFVKPDYEKYTVVAEQIREIFREYDPRMRAYSLDEAYLNVTKVLCERLGLDGSNAPAGTKEAGVAASAAAAGA---PEHVCSVTYEAEADTSRRRRMGSNVMYTEKRYEGDEEDEEEARDGRSWEKRNPRETRRIRLFEAARVLAEEIRARIREATKLTASVGIGPNFMLAKIASDWNKPDGQMCIGGDRAEVLRFLHDLPVRKIGGVGKVQEKCLREALGVVTCGDLFRERGAVIHVMTPHTSRWLIKACY----------------------PDAGKERTFGELSAPRDLLDKCREICDSLAAEMATKGLEAKXXXXXXXXXXXXXXTQDSTGHAYVSSADDLFSAASALLQREIQGAAAASAPGGKLRLRLIGVRASGFRGQAGAPVLPGQATLDGFLSSKAAEGGCQGGDESGNDDTRQRRKERVDTAGGVEQQ 570          
BLAST of mRNA_E-fasciculatus_F_contig1293.2220.1 vs. uniprot
Match: A0A7S2WBD8_9STRA (DNA polymerase kappa n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WBD8_9STRA)

HSP 1 Score: 332 bits (852), Expect = 1.040e-99
Identity = 211/567 (37.21%), Postives = 300/567 (52.91%), Query Frame = 1
Query:  229 AHMFVFSNNKAGMGSVDKERVNRIIYEMSKNSSYFKQAKLQDDKLDQKVAEMRVKLRALDAVRKAQLTRQADKIATELERQRQLDEVCLVIDMDMFYAAVEVRDRPELADKPVAVGGESMISTTNYHARLKGVRSAMPGFIGRKLCPELVFVKPDYEKYTVVAEQIREIFREYDPRMRSYSLDEAYLNVTRVLTERLGLDGSNAPAGTKEAGVAAAAARAAAAVTPEHVCSGTYEAEADTSRRRSMGSSVENMYYGHEEDEEEARDGRSGERRSPRETRRVRLFEAARTLAEEIRARIREATK-LTASVGIGPNFMLAKIASDWNKPDGQMCIGGDRAEVLRFLHDLPVRKIGGVGKVQEKCLREALGVVTCGDLFRERASVIHVMTSHTSRWLIKASLGIASADHDVA-------------TEQAQAVGAVTRKQISKERTFGELSAPRDLLNKCREICDSLAAEMATKGLEAKXXXXXXXXXXXXXXTQDSTGHA--YVSSADDLFSAASALLQREIQGAAASAPGGKLRLRLMGVKASGFRGQAGAPILPGQATLDGFLSSKAA 1881
            AH+FVF+N+KAGMG VDK +VN+++YEMSK+S+YF  A  QD K D+++ ++R KL++L   R++ L  +   +  +LE+QR    VC+V+DMD +YAAVE+RD P L DKP+AVGG  MIST NY AR  GVRSAMPGFI  KLCPEL+FV+  ++KY   ++++  + R+YDP  R  SLDEAYL++T  ++ R                                      + E  +S+    G +                               + L E A  +  E+RA+++EA+  LT S G+ PNF LAKIASD  KP+GQ  +   R   + FLH +PVRK+GG+GKV EK L+E  GV T  +LF +R  + H +T  +S WL++ +L I   D   A               +A +V +V RK IS ERTF  LS   DL  K   +C +LA  M+ K L  +              ++ +T  A  YVS+ +D+      LL++E            L LRLMG++ S F+ Q  A +  GQ T+  F+   AA
Sbjct:  130 AHLFVFTNDKAGMGKVDKSKVNKVVYEMSKDSAYFAHASSQDKKNDKRIHDLREKLQSLSLSRRSSLASEVSALEIKLEKQRFCRRVCVVVDMDCYYAAVEMRDNPHLRDKPMAVGGIGMISTANYKAREYGVRSAMPGFIALKLCPELIFVRSHFDKYKETSDRVLTVLRQYDPHCRMMSLDEAYLDLTEEVSRR--------------------------------------QVEETSSKANLEGGAQ------------------------------MELEEMASRVVAELRAKVQEASGGLTCSAGLAPNFRLAKIASDVKKPNGQCIVPFHREAAIAFLHSMPVRKVGGIGKVMEKTLKEVFGVETVAELFEKRLELFHCLTPKSSHWLLRVALAIHHDDEAKAMAEWKTAVGDGEDAAEATSVQSVRRKGISCERTFAPLSNRADLQAKLSSLCRTLAEHMSAKALSGRTVTLKLKTTKFEVRSRAATAPAGTYVSTGEDIERLVMPLLEKEFP----------LSLRLMGIRVSHFKNQFKA-LDAGQRTIGSFMQRGAA 617          
BLAST of mRNA_E-fasciculatus_F_contig1293.2220.1 vs. uniprot
Match: A0A833RXG3_PHYIN (DNA polymerase kappa n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833RXG3_PHYIN)

HSP 1 Score: 316 bits (810), Expect = 5.390e-97
Identity = 205/537 (38.18%), Postives = 289/537 (53.82%), Query Frame = 1
Query:  235 MFVFSNNKAGMGSVDKERVNRIIYEMSKNSSYFKQAKLQDDKLDQKVAEMRVKLRALDAVRKAQLTRQADKIATELERQRQLDEVCLVIDMDMFYAAVEVRDRPELADKPVAVGGESMISTTNYHARLKGVRSAMPGFIGRKLCPELVFVKPDYEKYTVVAEQIREIFREYDPRMRSYSLDEAYLNVTRVLTERLGLDGSNAPAGTKEAGVAAAAARAAAAVTPEHVCSGTYEAEADTSRRRSMGSSVENMYYGHEEDEEEARDGRSGERRSPRETRRVRLFEAARTLAEEIRARIREATKLTASVGIGPNFMLAKIASDWNKPDGQMCIGGDRAEVLRFLHDLPVRKIGGVGKVQEKCLREALGVVTCGDLFRERASVIHVMTSHTSRWLIKASLGIASADHDVATEQAQAVGAVTRKQISKERTFGELSAPRDLLNKCREICDSLAAEMATKGLEAKXXXXXXXXXXXXXXTQDSTGHAYVSSADDLFSAASALLQREIQGAAASAPGGKLRLRLMGVKASGFRGQAGAPILPGQ 1845
            MFVF+ +KAGM  VDK+ V  ++++MSK+SS+F+++   + K++Q+VA MR KL  L   +  +L ++AD    +LE  R L    +V+DMDMFYAAVE+RD P+L D P+AVGG  MISTTNY AR  GVR+AMPGFIG++LCP+L FV  + +KY  VA +IR +F EYDP   ++SLDEA L++T  + E                               +++     E E+  S +    S+                 GR+                 A  +  E+R ++ + T+LTAS GI  N MLAKI SD NKP+GQ  +   R  V+ F+ +LPVRKIGG+GKV EK L EAL V T GDLF +R  + H+ +  T+ WL++ SLG+         E+ +      RK  S+ERTF  LS P+ L  KC EIC+ LA ++      AK              ++  +  + V + DDLFS A  LL+RE+           L LRLMGV+A+    +  +P  P Q
Sbjct:   30 MFVFTADKAGMKGVDKQHVQEVVHKMSKDSSFFQKSLRDNAKVEQRVAAMREKLACLTGSQLQRLQQEADARVAQLEATRDLSRTIVVVDMDMFYAAVEMRDDPKLRDVPLAVGGLGMISTTNYAARQFGVRAAMPGFIGKELCPDLHFVPVNMKKYAGVAAEIRAVFAEYDPDFEAFSLDEACLDLTDYIAENW----------------------------QKYISDAMDEIESKESDKEEWASTAS---------------GRAA---------------IAAVVVRELRKKVFDCTQLTASAGIAVNSMLAKICSDMNKPNGQYVLPFSRERVMTFIRELPVRKIGGIGKVMEKTLNEALDVQTGGDLFDQRGKIAHLFSGKTAMWLLQTSLGVQER-----REKQE------RKSFSRERTFKRLSDPKQLEEKCLEICEMLAKDLEKANKAAKNVTFVFKDTDFARCSRSMSLASAVYTVDDLFSNAVELLRRELP----------LTLRLMGVRAASLVSRCTSPDNPSQ 487          
BLAST of mRNA_E-fasciculatus_F_contig1293.2220.1 vs. uniprot
Match: K3WQ44_GLOUD (DNA polymerase kappa n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WQ44_GLOUD)

HSP 1 Score: 314 bits (804), Expect = 7.040e-97
Identity = 206/510 (40.39%), Postives = 280/510 (54.90%), Query Frame = 1
Query:  265 MGSVDKERVNRIIYEMSKNSSYFKQAKLQDDKLDQKVAEMRVKLRALDAVRKAQLTRQADKIATELERQRQLDEVCLVIDMDMFYAAVEVRDRPELADKPVAVGGESMISTTNYHARLKGVRSAMPGFIGRKLCPELVFVKPDYEKYTVVAEQIREIFREYDPRMRSYSLDEAYLNVTRVLTERLGLDGSNAPAGTKEAGVAAAAARAAAAVTPEHVCSGTYEAEADTSRRRSMGSSVENMYYGHEEDEEEARDGRSGERRSPRETRRVRLFEAARTLAEEIRARIREATKLTASVGIGPNFMLAKIASDWNKPDGQMCIGGDRAEVLRFLHDLPVRKIGGVGKVQEKCLREALGVVTCGDLFRERASVIHV-MTSHTSRWLIKASLGIASADHDVATEQAQAVGAVTRKQISKERTFGELSAPRDLLNKCREICDSLAAEMATKGLEAKXXXXXXXXXXXXXXTQDSTGHAYVSSADDLFSAASALLQREIQGAAASAPGGKLRLRLMG 1791
            M  VDK  V +++Y+MSK+S +F+ +  Q+DK++ K+  MR +L  L A ++  L  Q DK+  +LE  R L    +V+DMDMFYAAVE+RD P+L + P+AVGG SMISTTNY AR  GVR+AMPGFIG++LCPELVFV P++ KY  VA QIREIF EYDP   ++SLDEA L++T  +                                    C+  +EA  D                G E++EE   DGR    +   + RRV++   A ++  EIRARI E T LTAS GI  N +LAKIASD NKP+GQ  +   R  V+ F+   PVRKI G+GKV EK L   LG+ T  DLF  RAS+ HV M + T+ WL++ SL I   D D A  +        RK  S+ERTF  +S P+ +   C ++C+ LAA+M      AK              T+  +  A + + D+L+  A  +L++E+           L LRLMG
Sbjct:    1 MSHVDKAHVEKVVYDMSKDSKFFQNSMKQNDKVNAKIEVMRAQLARLSAAKRDALQAQVDKLVVQLEATRDLTRAVVVVDMDMFYAAVEMRDNPKLREVPLAVGGLSMISTTNYIARKFGVRAAMPGFIGKELCPELVFVPPNFHKYKQVATQIREIFAEYDPHFSAFSLDEAKLDITEYMEAHW-----------------------------SKYCTVDHEASGDDQE-------------GDEDEEESKHDGRQ---QRMEQARRVQI---ASSIVAEIRARIFEKTALTASAGIAVNTLLAKIASDRNKPNGQFVVPFTRDSVVSFIQSQPVRKISGIGKVMEKILSATLGIATGKDLFTHRASLFHVFMETKTAPWLLRTSLAIQE-DRDAAHAE--------RKSFSRERTFRNVSDPQVMEKICADVCEKLAADMEKAQTGAKTLTLKLKCADFSVRTRSVSFTAALQTKDELWEHAVKILRKELP----------LTLRLMG 443          
BLAST of mRNA_E-fasciculatus_F_contig1293.2220.1 vs. uniprot
Match: A0A8K1FPT7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FPT7_PYTOL)

HSP 1 Score: 320 bits (821), Expect = 1.610e-96
Identity = 203/525 (38.67%), Postives = 285/525 (54.29%), Query Frame = 1
Query:  229 AHMFVFSNNKAGMGSVDKERVNRIIYEMSKNSSYFKQAKLQDDKLDQKVAEMRVKLRALDAVRKAQLTRQADKIATELERQRQLDEVCLVIDMDMFYAAVEVRDRPELADKPVAVGGESMISTTNYHARLKGVRSAMPGFIGRKLCPELVFVKPDYEKYTVVAEQIREIFREYDPRMRSYSLDEAYLNVTRVLTERLGLDGSNAPAGTKEAGVAAAAARAAAAVTPEHVCSGTYEAEADTSRRRSMGSSVENMYYGHEEDEEEARDGRSGERRSPRETRRVRLFEAARTLAEEIRARIREATKLTASVGIGPNFMLAKIASDWNKPDGQMCIGGDRAEVLRFLHDLPVRKIGGVGKVQEKCLREALGVVTCGDLFRERASVIHVMTSHTSRWLIKASLGIASADHDVATEQAQAVGAVTRKQISKERTFGELSAPRDLLNKCREICDSLAAEMATKGLEAKXXXXXXXXXXXXXXTQDSTGHAYVSSADDLFSAASALLQREIQGAAASAPGGKLRLRLMGVKAS 1803
            A MFVF+  KAGM  VDKE V +++YEMSK+S +F+ +  Q+ K++ ++ EM++KLR L   +   L RQ D +  + E QR L    +V+DMDMFYAAVE+RD P L  KPVAVGG  M+STTNY AR  GVR+AMPGFIG++LCPEL+ V  +++KYT +++Q+R I  +YDP   + SLDE YL++T  +                                           EA+ ++    G          ++D EE  D +S    S RET        A  + +EIR RI   T+LTAS GI  N MLAKI SD NKP+GQ  +   R  V+ F+  LPVRKIGG+GKV EK L  ALG+ T  D++  R  + H +T  ++ WL++ S+G+  +  + +           RK  S+ERTF  +  PR L   CRE+CD L  ++A  G  AK              T+  +    + ++DDLF+ A  LL++E+           L LRL+GV+AS
Sbjct:   33 AQMFVFTAQKAGMKDVDKEHVQKVVYEMSKDSLFFQNSIKQNQKVEARINEMKLKLRGLTKAKHETLRRQIDPLVAQWETQRDLTRTMVVVDMDMFYAAVEMRDNPSLRGKPVAVGGIGMLSTTNYEARKFGVRAAMPGFIGKELCPELIIVPTNFKKYTTISQQVRAIVADYDPNFTAMSLDEVYLDITDYM-------------------------------------------EANWAKYAGAGGGRSESDDEADQDGEEIED-QSHAMNSQRET-------VAAAIVDEIRRRIHGVTQLTASAGIAANTMLAKICSDINKPNGQYVLPFTRDRVVSFVQGLPVRKIGGIGKVMEKVLG-ALGITTAKDIYDHRVELFHALTPRSAAWLLQISMGVKQSSGEPSE----------RKSYSRERTFRGIGDPRWLEKICREVCDMLGKDLAEGGHGAKTLTLKLKCVDFSVRTRAVSSTCIMKTSDDLFAYAIELLRKEMP----------LELRLLGVRAS 485          
BLAST of mRNA_E-fasciculatus_F_contig1293.2220.1 vs. uniprot
Match: A0A2D4CEH4_PYTIN (DNA polymerase kappa n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CEH4_PYTIN)

HSP 1 Score: 317 bits (813), Expect = 1.110e-95
Identity = 211/525 (40.19%), Postives = 290/525 (55.24%), Query Frame = 1
Query:  229 AHMFVFSNNKAGMGSVDKERVNRIIYEMSKNSSYFKQAKLQDDKLDQKVAEMRVKLRALDAVRKAQLTRQADKIATELERQRQLDEVCLVIDMDMFYAAVEVRDRPELADKPVAVGGESMISTTNYHARLKGVRSAMPGFIGRKLCPELVFVKPDYEKYTVVAEQIREIFREYDPRMRSYSLDEAYLNVTRVLTERLGLDGSNAPAGTKEAGVAAAAARAAAAVTPEHVCSGTYEAEADTSRRRSMGSSVENMYYGHEEDEEEARDGRSGERRSPRETRRVRLFEAARTLAEEIRARIREATKLTASVGIGPNFMLAKIASDWNKPDGQMCIGGDRAEVLRFLHDLPVRKIGGVGKVQEKCLREALGVVTCGDLFRERASVIHVMTSHTSRWLIKASLGIASADHDVATEQAQAVGAVTRKQISKERTFGELSAPRDLLNKCREICDSLAAEMATKGLEAKXXXXXXXXXXXXXXTQDSTGHAYVSSADDLFSAASALLQREIQGAAASAPGGKLRLRLMGVKAS 1803
            A +FVF+  KAGM  VDK  V ++++EMSK+S++F+ +  Q+ K++ ++AEM  KL  L   R+  L RQ D++   LE QR+L    +V+DMDMFYAAVE+RD P L  KPVAVGG SM+STTNY AR  GVR+AMPGFIG++LCP+LV V P +E+YT +++QIR I  +YDP  R+ SLDE Y ++T  +                +A  A  AA + AA   E                       E    G + D+E      +    +P   R+     AA  +  E+R +I E T+LTAS GI  N MLAKI SD NKP+GQ  +   R  ++ F+  L VRKIGG+GKV EK L  ALGV T  DLF  R  V HV T  T++WL++ +LGI +++   + ++     A  RK  S+ERTF  L  P  L   CRE+CD L  ++A  G   K              T+  +    + S+DDLF  A  LL++ +           L+LRLMGV+ S
Sbjct:    8 AQLFVFTAQKAGMQGVDKAHVQKVVFEMSKDSAFFQNSMRQNAKVEARIAEMTAKLEGLTPARRETLRRQIDQMIATLEAQRELGRTKVVVDMDMFYAAVEMRDNPSLRGKPVAVGGMSMLSTTNYEARKYGVRAAMPGFIGKELCPDLVLVPPRFEQYTAISQQIRAIVEQYDPDFRALSLDEVYCDITDYM----------------DAHWARYAAHSTAACDLEE----------------------EQDDVGVKSDDEXXXGAVAV---APALLRQREAVAAA--IVAELRQKIFEETQLTASAGIAANSMLAKICSDMNKPNGQFVLPFSRDRIVAFMQSLSVRKIGGIGKVMEKVLG-ALGVETAQDLFERRVEVFHVFTPRTAKWLLQVALGIHASERSSSGDE----DASQRKSYSRERTFRGLRDPXWLEKICRELCDMLEQDLAHGGHGGKTVTLKLKCVDFRVKTRAVSTSRTLRSSDDLFDVACELLRKXLP----------LKLRLMGVRVS 474          
BLAST of mRNA_E-fasciculatus_F_contig1293.2220.1 vs. uniprot
Match: G4YKE9_PHYSP (DNA polymerase kappa n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YKE9_PHYSP)

HSP 1 Score: 315 bits (808), Expect = 1.890e-95
Identity = 204/523 (39.01%), Postives = 291/523 (55.64%), Query Frame = 1
Query:  235 MFVFSNNKAGMGSVDKERVNRIIYEMSKNSSYFKQAKLQDDKLDQKVAEMRVKLRALDAVRKAQLTRQADKIATELERQRQLDEVCLVIDMDMFYAAVEVRDRPELADKPVAVGGESMISTTNYHARLKGVRSAMPGFIGRKLCPELVFVKPDYEKYTVVAEQIREIFREYDPRMRSYSLDEAYLNVTRVLTERLGLDGSNAPAGTKEAGVAAAAARAAAAVTPEHVCSGTYEAEADTSRRRSMGSSVENMYYGHEEDEEEARDGRSGERRSPRETRRVRLFEAARTLAEEIRARIREATKLTASVGIGPNFMLAKIASDWNKPDGQMCIGGDRAEVLRFLHDLPVRKIGGVGKVQEKCLREALGVVTCGDLFRERASVIHVMTSHTSRWLIKASLGIASADHDVATEQAQAVGAVTRKQISKERTFGELSAPRDLLNKCREICDSLAAEMATKGLEAKXXXXXXXXXXXXXXTQDSTGHAYVSSADDLFSAASALLQREIQGAAASAPGGKLRLRLMGVKAS 1803
            MFVF+ +KAGM  VDK+ V  ++++MSK+SS+++++   ++K++Q+VA MR KL  L   ++ +L ++AD+    +E  R L +  +V+DMDMFYAAVE+RD P+L D P+AVGG +MISTTNY AR  GVR+AMPGFIG++LCPEL FV  + EKY  VA Q+R +F +YDP   ++SLDEA L++T  + +             K A VA                   +E++ +         S                 GR+                 A  +  E+R +I + T+LTAS GI  N MLAKI SD NKP+GQ  +   R  VL FL DLPVRKIGG+GKV EK L EALGV T G+LF +R  + H+ T  T+ WL++ SLG+         E+ +      RK  S+ERTF  LS P++L  KC E+C  LA ++      AK              ++  T  + + +A+DL+S+A  LL+RE+           L LRL+GV+A+
Sbjct:    1 MFVFTADKAGMKGVDKQHVQEVVHKMSKDSSFYQKSLRDNEKVEQRVAAMRKKLAGLTGGQQLRLQQEADERVARMEATRDLSKTIVVVDMDMFYAAVEMRDDPKLCDVPLAVGGMNMISTTNYAARQFGVRAAMPGFIGKELCPELHFVPVNMEKYAGVAAQVRAVFAQYDPNFEAFSLDEACLDLTDYVAKNW----------QKYASVAL----------------DDFESKEEVQEEEEQWPSTPA--------------GRAA---------------IAAAVVRELRQKIFDCTQLTASAGIAVNAMLAKICSDMNKPNGQYVLPFTRERVLTFLCDLPVRKIGGIGKVTEKILNEALGVHTGGELFNQRGKIFHLFTEKTAVWLLQTSLGVRER-----REKQE------RKSFSRERTFRSLSDPKELEAKCLEVCKMLAKDLEKANKAAKNVTFVYKDTDFARCSRSVTLASAIFTAEDLYSSAVELLRRELP----------LTLRLLGVRAA 447          
BLAST of mRNA_E-fasciculatus_F_contig1293.2220.1 vs. uniprot
Match: A0A6A3TSG2_9STRA (DNA polymerase kappa n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TSG2_9STRA)

HSP 1 Score: 319 bits (817), Expect = 3.380e-95
Identity = 210/543 (38.67%), Postives = 293/543 (53.96%), Query Frame = 1
Query:  235 MFVFSNNKAGMGSVDKERVNRIIYEMSKNSSYFKQAKLQDDKLDQKVAEMRVKLRALDAVRKAQLTRQADKIATELERQRQLDEVCLVIDMDMFYAAVEVRDRPELADKPVAVGGESMISTTNYHARLKGVRSAMPGFIGRKLCPELVFVKPDYEKYTVVAEQIREIFREYDPRMRSYSLDEAYLNVTRVLTERLGLDGSNAPAGTKEAGVAAAAARAAAAVTPEHVCSGTYEAEADTSRRRSMGSSVENMYYGHEEDEE----EARDGRSGERRSPRETRRVRLFEAARTLAEEIRARIREATKLTASVGIGPNFMLAKIASDWNKPDGQMCIGGDRAEVLRFLHDLPVRKIGGVGKVQEKCLREALGVVTCGDLFRERASVIHVMTSHTSRWLIKASLGIASADHDVATEQAQAVGAVTRKQISKERTFGELSAPRDLLNKCREICDSLAAEMATKGLEAKXXXXXXXXXXXXXXTQDSTGHAYVSSADDLFSAASALLQREIQGAAASAPGGKLRLRLMGVKASGFRGQAGAPILPGQAT 1851
            MFVF+ +KAGM  V+K+ V  ++++MSK+SS+++++   ++K++Q+VA MR KL  L   ++ +L ++AD    ++E  R L    +V+DMDMFYAAVE+RD P+L D P+AVGG  MISTTNY AR  GVR+AMPGFIG++LCP+L FV  + EKY  VA Q+R +F +YDP   ++SLDEA L++T  + +                                                R   S  E  +   E D+E       DGR+                 A  +  E+R +I + T+LTAS GI  N MLAKI SD NKP+GQ  +   R  VL F+ DLPVRKIGG+GKV EK L EAL V T G+LF +R+ + H+ T  T+ WL++ SLG+         E+ +      RK  S+ERTF  LS P  L  KC EIC+ LA ++      AK              ++  T  + V SADDL+S A  LL+RE+           L LRLMGV+A+    +  +P L G+ T
Sbjct:   32 MFVFTVDKAGMKGVNKQHVQEVVHKMSKDSSFYQKSLRDNEKVEQRVAAMRDKLACLTGGQQLRLQQEADVRVAQMEATRDLSRTVVVVDMDMFYAAVEMRDDPKLRDVPLAVGGMIMISTTNYAARQFGVRAAMPGFIGKELCPDLHFVPVNMEKYAGVAAQVRTVFAQYDPDFEAFSLDEACLDLTEYIAKHW----------------------------------------------RKYASVAEIDFESKESDDEAQWTSTTDGRAA---------------IAAAVVRELRQKIFDCTQLTASAGIAVNAMLAKICSDMNKPNGQYVLPFTRERVLAFIRDLPVRKIGGIGKVTEKILSEALDVHTGGELFNQRSKIFHLFTEKTAVWLLQTSLGVRGR-----REKQE------RKSFSRERTFRSLSDPNQLEAKCLEICEMLADDLEAANKAAKNVTFVYKDTDFARCSRSVTLASAVFSADDLYSNAVELLRRELP----------LTLRLMGVRAATLVSRPSSPSLSGRTT 492          
BLAST of mRNA_E-fasciculatus_F_contig1293.2220.1 vs. uniprot
Match: A0A5D6XYT3_9STRA (DNA polymerase kappa n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XYT3_9STRA)

HSP 1 Score: 326 bits (835), Expect = 5.060e-95
Identity = 212/540 (39.26%), Postives = 299/540 (55.37%), Query Frame = 1
Query:  235 MFVFSNNKAGMGSVDKERVNRIIYEMSKNSSYFKQAKLQDDKLDQKVAEMRVKLRALDAVRKAQLTRQADKIATELERQRQLDEVCLVIDMDMFYAAVEVRDRPELADKPVAVGGESMISTTNYHARLKGVRSAMPGFIGRKLCPELVFVKPDYEKYTVVAEQIREIFREYDPRMRSYSLDEAYLNVTRVLTERLGLDGSNAPAGTKEAGVAAAAARAAAAVTPEHVCSGTYEAEADTSRRRSMGSSVENMYYGHEEDEEEARDGRSGERRSPRETRRVRLFEAARTLAEEIRARIREATKLTASVGIGPNFMLAKIASDWNKPDGQMCIGGDRAEVLRFLHDLPVRKIGGVGKVQEKCLREALGVVTCGDLFRERASVIHVMTSHTSRWLIKASLGIASADHDVATEQAQAVGAVTRKQISKERTFGELSAPRDLLNKCREICDSLAAEMATKGLEAKXXXXXXXXXXXXXXTQDSTGHAYVSSADDLFSAASALLQREIQGAAASAPGGKLRLRLMGVKASGFRGQAGAPILPGQATL 1854
            +FVF+  KAGMG VD+ RV +++  MSK+S + + +  Q+ ++D K+A+M+ +L AL + R+  L R+ D    +LE  R L    +V+DMDMFYAAVE+RD P L D P+AVGG +MISTTNY AR  GVR+AMPGFIGR+LCP LVFV+P+++KYT VA QIR++F EYDP   ++SLDEA L+++  + E  G     AP  ++E                      T E+E+++ R                 D+E+A   R  +R            + A  +  EIR +I   T LTAS G+  N MLAKIASD NKP+GQ  +   R  V+ F+   PVRKIGG+GKV EK L  A+GV+T  DLF  R  + HV +  T+ WL++ SLG+         E  ++ G   RK  S+ERTF  LS P  L   C ++C+ LA +M       +              ++  +    + S DDL + A A+L++E+           L LRL+GV+ASG    +GA  LPG A +
Sbjct:  274 LFVFAAQKAGMGDVDRARVQQVMLNMSKDSQFLRNSLRQNGRVDAKIADMQRQLTALSSARRDALQRRVDAAVAQLEAARDLSRTVVVVDMDMFYAAVEMRDDPALRDVPLAVGGMNMISTTNYIARKFGVRAAMPGFIGRELCPALVFVRPNFDKYTAVAAQIRDVFAEYDPHFSAFSLDEAMLDISEYMEEHWGQ--YYAPEKSRE----------------------TAESESESKR-----------------DDEDAESERLDDRAR---------VQVAAAVVNEIRHKIFLKTGLTASAGVAVNTMLAKIASDMNKPNGQFVLPFTRESVVSFIQSQPVRKIGGIGKVMEKILA-AIGVITGADLFARRVELFHVFSDKTAPWLLRTSLGV--------KEARESTG---RKSFSRERTFQNLSEPAALEQVCLKVCELLADDMEEADAGCRTLTLKLKCADFSVRSRSVSFATALKSKDDLSANALAILRKELP----------LTLRLLGVRASGLVSLSGAAGLPGGAKV 741          
BLAST of mRNA_E-fasciculatus_F_contig1293.2220.1 vs. uniprot
Match: A0A2P4X3V1_9STRA (DNA polymerase kappa n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X3V1_9STRA)

HSP 1 Score: 311 bits (798), Expect = 7.620e-94
Identity = 203/523 (38.81%), Postives = 285/523 (54.49%), Query Frame = 1
Query:  235 MFVFSNNKAGMGSVDKERVNRIIYEMSKNSSYFKQAKLQDDKLDQKVAEMRVKLRALDAVRKAQLTRQADKIATELERQRQLDEVCLVIDMDMFYAAVEVRDRPELADKPVAVGGESMISTTNYHARLKGVRSAMPGFIGRKLCPELVFVKPDYEKYTVVAEQIREIFREYDPRMRSYSLDEAYLNVTRVLTERLGLDGSNAPAGTKEAGVAAAAARAAAAVTPEHVCSGTYEAEADTSRRRSMGSSVENMYYGHEEDEEEARDGRSGERRSPRETRRVRLFEAARTLAEEIRARIREATKLTASVGIGPNFMLAKIASDWNKPDGQMCIGGDRAEVLRFLHDLPVRKIGGVGKVQEKCLREALGVVTCGDLFRERASVIHVMTSHTSRWLIKASLGIASADHDVATEQAQAVGAVTRKQISKERTFGELSAPRDLLNKCREICDSLAAEMATKGLEAKXXXXXXXXXXXXXXTQDSTGHAYVSSADDLFSAASALLQREIQGAAASAPGGKLRLRLMGVKAS 1803
            MFVF+ +KAGM  VDK+ V  ++++MSK+SS+++++   ++K++Q+V  MR KL  L   +  +L ++AD    ++E  R L    +V+DMDMFYAAVE+RD P+L D P+AVGG +MISTTNY AR  GVR+AMPGFIG++LCP+L FV  + EKY  VA QIR +F EYDP   ++SLDEA L++T  +                                                  R   S V +     E D+EE     +  R +            A T+  E+R +I + T+LTAS GI  N MLAKI SD NKP+GQ  +   R  V+ F+ +LPVRKIGG+GKV EK L EAL V T G LF +R  + H+ +  T+ WL++ SLG+         E+ +      RK  S+ERTFG LS P++L  KC EIC  LA ++      AK              ++  T  + V +A+DL++ A  LL+RE+           L LRLMGV+A+
Sbjct:    1 MFVFTADKAGMKGVDKQHVQEVVHKMSKDSSFYQKSLRDNEKVEQRVVAMREKLACLTGGQLLRLQQEADARVAQMEATRDLSRTIVVVDMDMFYAAVEMRDNPKLRDIPLAVGGLNMISTTNYAARQFGVRAAMPGFIGKELCPQLHFVPVNMEKYAGVAAQIRAVFAEYDPNFEAFSLDEACLDLTDYVANNW----------------------------------------------RKYVSVVVDEGESKESDDEEQWTSTAAGRAA-----------IAETVVRELRKKIFDCTQLTASAGIAVNAMLAKICSDMNKPNGQYVLPFTRERVMAFIRELPVRKIGGIGKVTEKILNEALDVHTGGQLFAQRGRIFHLFSEKTAEWLLQTSLGVRER-----REKQE------RKSFSRERTFGRLSDPKELEAKCLEICRLLAKDLEKANKAAKNVTFVYKDTDFARCSRSMTLASAVFTAEDLYANAVELLRRELP----------LTLRLMGVRAA 445          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1293.2220.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KQM2_9PHAE0.000e+084.87DNA polymerase kappa n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A7S2WBD8_9STRA1.040e-9937.21DNA polymerase kappa n=1 Tax=Rhizochromulina marin... [more]
A0A833RXG3_PHYIN5.390e-9738.18DNA polymerase kappa n=1 Tax=Phytophthora infestan... [more]
K3WQ44_GLOUD7.040e-9740.39DNA polymerase kappa n=1 Tax=Globisporangium ultim... [more]
A0A8K1FPT7_PYTOL1.610e-9638.67Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4CEH4_PYTIN1.110e-9540.19DNA polymerase kappa n=2 Tax=Pythium insidiosum Ta... [more]
G4YKE9_PHYSP1.890e-9539.01DNA polymerase kappa n=1 Tax=Phytophthora sojae (s... [more]
A0A6A3TSG2_9STRA3.380e-9538.67DNA polymerase kappa n=4 Tax=Phytophthora TaxID=47... [more]
A0A5D6XYT3_9STRA5.060e-9539.26DNA polymerase kappa n=1 Tax=Pythium brassicum Tax... [more]
A0A2P4X3V1_9STRA7.620e-9438.81DNA polymerase kappa n=1 Tax=Phytophthora palmivor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1293contigE-fasciculatus_F_contig1293:3..5386 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score924.9
Seed ortholog evalue2.2e-266
Seed eggNOG ortholog2880.D8LUC4
Preferred namePOLK
KEGG rclassRC00022,RC00929,RC02834,RC02880
KEGG koko:K00281,ko:K01537,ko:K03511,ko:K14050
KEGG TC3.A.3.2
KEGG ReactionR01221,R03425
KEGG Pathwayko00260,ko00630,ko01100,ko01110,ko01130,ko01200,ko03460,ko05200,ko05202,ko05210,ko05212,ko05213,ko05214,ko05216,ko05217,ko05218,ko05220,ko05222,ko05223,ko05224,ko05225,ko05226,map00260,map00630,map01100,map01110,map01130,map01200,map03460,map05200,map05202,map05210,map05212,map05213,map05214,map05216,map05217,map05218,map05220,map05222,map05223,map05224,map05225,map05226
KEGG ModuleM00532
GOsGO:0000003,GO:0000228,GO:0000731,GO:0000785,GO:0000790,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0003887,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006283,GO:0006289,GO:0006296,GO:0006297,GO:0006301,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009607,GO:0009628,GO:0009719,GO:0009790,GO:0009792,GO:0009987,GO:0016020,GO:0016604,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019985,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0033554,GO:0033683,GO:0034061,GO:0034641,GO:0034644,GO:0034645,GO:0034654,GO:0042276,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0046483,GO:0048856,GO:0050896,GO:0051716,GO:0070013,GO:0070987,GO:0071214,GO:0071216,GO:0071478,GO:0071482,GO:0071495,GO:0071704,GO:0071897,GO:0072396,GO:0072402,GO:0072423,GO:0072429,GO:0090304,GO:0090305,GO:0097159,GO:0104004,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576
EggNOG free text desc.DNA-directed DNA polymerase activity
EggNOG OGsCOG0389@1,KOG2094@2759
EC1.4.4.2,2.5.1.60,2.7.7.7,3.6.3.8
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01006,ko03400,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionDNA polymerase, Y-family, little finger domain
Ec32 orthologEc-14_004450.1
Exons8
Model size1977
Cds size1968
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927796.9955237-CDS-E-fasciculatus_F_contig1293:2..3971622927796.9955237-CDS-E-fasciculatus_F_contig1293:2..397Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1293 3..397 -
1695995698.9515853-CDS-E-fasciculatus_F_contig1293:2..3971695995698.9515853-CDS-E-fasciculatus_F_contig1293:2..397Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1293 3..397 -
1622927797.0101197-CDS-E-fasciculatus_F_contig1293:1079..11621622927797.0101197-CDS-E-fasciculatus_F_contig1293:1079..1162Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1293 1080..1162 -
1695995698.9633613-CDS-E-fasciculatus_F_contig1293:1079..11621695995698.9633613-CDS-E-fasciculatus_F_contig1293:1079..1162Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1293 1080..1162 -
1622927797.0282393-CDS-E-fasciculatus_F_contig1293:1874..19601622927797.0282393-CDS-E-fasciculatus_F_contig1293:1874..1960Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1293 1875..1960 -
1695995698.971739-CDS-E-fasciculatus_F_contig1293:1874..19601695995698.971739-CDS-E-fasciculatus_F_contig1293:1874..1960Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1293 1875..1960 -
1622927797.0425296-CDS-E-fasciculatus_F_contig1293:2251..23861622927797.0425296-CDS-E-fasciculatus_F_contig1293:2251..2386Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1293 2252..2386 -
1695995698.9800231-CDS-E-fasciculatus_F_contig1293:2251..23861695995698.9800231-CDS-E-fasciculatus_F_contig1293:2251..2386Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1293 2252..2386 -
1622927797.0531955-CDS-E-fasciculatus_F_contig1293:2912..30081622927797.0531955-CDS-E-fasciculatus_F_contig1293:2912..3008Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1293 2913..3008 -
1695995698.988267-CDS-E-fasciculatus_F_contig1293:2912..30081695995698.988267-CDS-E-fasciculatus_F_contig1293:2912..3008Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1293 2913..3008 -
1622927797.0680108-CDS-E-fasciculatus_F_contig1293:3283..39291622927797.0680108-CDS-E-fasciculatus_F_contig1293:3283..3929Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1293 3284..3929 -
1695995698.996459-CDS-E-fasciculatus_F_contig1293:3283..39291695995698.996459-CDS-E-fasciculatus_F_contig1293:3283..3929Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1293 3284..3929 -
1622927797.0796392-CDS-E-fasciculatus_F_contig1293:4451..46151622927797.0796392-CDS-E-fasciculatus_F_contig1293:4451..4615Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1293 4452..4615 -
1695995699.0046878-CDS-E-fasciculatus_F_contig1293:4451..46151695995699.0046878-CDS-E-fasciculatus_F_contig1293:4451..4615Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1293 4452..4615 -
1622927797.0893452-CDS-E-fasciculatus_F_contig1293:5014..53771622927797.0893452-CDS-E-fasciculatus_F_contig1293:5014..5377Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1293 5015..5377 -
1695995699.0129066-CDS-E-fasciculatus_F_contig1293:5014..53771695995699.0129066-CDS-E-fasciculatus_F_contig1293:5014..5377Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1293 5015..5377 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927797.1039658-UTR-E-fasciculatus_F_contig1293:5377..53861622927797.1039658-UTR-E-fasciculatus_F_contig1293:5377..5386Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1293 5378..5386 -
1695995699.021267-UTR-E-fasciculatus_F_contig1293:5377..53861695995699.021267-UTR-E-fasciculatus_F_contig1293:5377..5386Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1293 5378..5386 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1293.2220.1prot_E-fasciculatus_F_contig1293.2220.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1293 3..5377 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1293.2220.1

>prot_E-fasciculatus_F_contig1293.2220.1 ID=prot_E-fasciculatus_F_contig1293.2220.1|Name=mRNA_E-fasciculatus_F_contig1293.2220.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=656bp
MCYHYCCSFHAKPAHALHLFTSLRRSGFTMEKENVVAASSAKTQQQKQPA
AAAAAAAAAEGESTASSSASSSAAHMFVFSNNKAGMGSVDKERVNRIIYE
MSKNSSYFKQAKLQDDKLDQKVAEMRVKLRALDAVRKAQLTRQADKIATE
LERQRQLDEVCLVIDMDMFYAAVEVRDRPELADKPVAVGGESMISTTNYH
ARLKGVRSAMPGFIGRKLCPELVFVKPDYEKYTVVAEQIREIFREYDPRM
RSYSLDEAYLNVTRVLTERLGLDGSNAPAGTKEAGVAAAAARAAAAVTPE
HVCSGTYEAEADTSRRRSMGSSVENMYYGHEEDEEEARDGRSGERRSPRE
TRRVRLFEAARTLAEEIRARIREATKLTASVGIGPNFMLAKIASDWNKPD
GQMCIGGDRAEVLRFLHDLPVRKIGGVGKVQEKCLREALGVVTCGDLFRE
RASVIHVMTSHTSRWLIKASLGIASADHDVATEQAQAVGAVTRKQISKER
TFGELSAPRDLLNKCREICDSLAAEMATKGLEAKTVGLKVKTTKFQVRTQ
DSTGHAYVSSADDLFSAASALLQREIQGAAASAPGGKLRLRLMGVKASGF
RGQAGAPILPGQATLDGFLSSKAAQGGCQGEDGSGNDGKRQQREGDMDTA
AGVKQQ
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mRNA from alignment at E-fasciculatus_F_contig1293:3..5386-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1293.2220.1 ID=mRNA_E-fasciculatus_F_contig1293.2220.1|Name=mRNA_E-fasciculatus_F_contig1293.2220.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=5384bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1293:3..5386- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CTGCCCTGTATGTGCTACCACTACTGCTGCTCGTTCCACGCGAAACCCGC CCACGCGCTCCATCTGTTCACCTCCCTCCGGAGGTCAGGGTTCACAATGG AGAAAGAGAATGTGGTGGCTGCCTCGTCGGCGAAAACGCAGCAGCAAAAG CAACCGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGAGGGTGAATCTAC TGCATCTTCTTCCGCCTCCAGCTCTGCAGCCCACATGTTTGTCTTCTCCA ACAATAAGGCCGGCATGGGGAGTGTGGACAAGGAGAGGGTCAATCGCATC ATCTACGAGATGAGCAAGAACTCGTCCTACTTTAAGCAGGCTAAGCTTCA GGACGACAAACTTGATCAGAAGGTACACACATCAAGTGGCGGTTTGAAAT TCGCGAATTCGCGCGCGTCCCGCGGGTTGGCATGCGAACCGGCTCTCTTT GTGTTTTCTGCCTATTCAACGTACTTAGCCGGGAAAGCATTACAGTTCGA TTTACCTTGTTTTGTCTAGCTAGCTAGAGCTTGGTTTGCCACGATGGTCA GGTCTACCGTCAGTACAGGGTATTTCTTATTTTGTGTGCGGCAGTGCGGC AGTACCATCGGTGTTCCAGCAGTCATTTGCACCCCGGGCTTGTGTCCTCA ACGCGTACTGCTGTACTGCTGTAGAACGCGTTTCATCGACTGCTCAACGC GTATGCATAGAACGCATTTCATCGACTGCGCACTGTCGTGCACGGTTTCG TACAACCGCACTTATTTTCAGGTGGCAGAGATGAGGGTGAAACTCAGAGC ACTGGACGCCGTTCGCAAGGCCCAGCTTACTCGCCAGGCGGACAAGATAG CGACGGAGCTGGAAAGACAGCGACAGCTCGACGAAGTCTGTCTGGTGATA GACATGGACATGTTTTATGCGGCCGTGGAAGTCAGGTCAGTAATACCGAC CACTTCTGCGAACCCGATATCGTACATAGTTTGTTTATTCTTCGAGGAAC CCGTTCGAAAACGCGCATTCCTCCTAACGGGTGGGGTACAGCAGTGTGAT GTCGAATTTCGAAGGTCAGGTGTGCTCTGCACTCCTTCGAAGTCAGTCCT CCTGGCATGCCGTCGAGGCGGGGACTTGCTGTCGGTTATCGTCGAACTGC AGCACTGCCGCCAAAGGGGAGGGTTCCCCGCTTTGCCGTGACGCTAAATC GTCGTGGTATTCCGTGGAGACATGCTCGGATGCTAATAGTACATCGGCTG TCTTATGTAGGCTCACCGGACAACAGCTAAGGCGAGAGGCATCGTGCGAA AAATGAACCTCGTGCGTGGCCCTCTGCATGATGAGTTTTCCGAACGGATA GAATAGCCGTGTGCCGAAAGTTCACATCTCGCTGCTTTTAGTCTGGTTTT ATCCCTCGACGGGTTTGGCGTCTGATGATGTCACGATGGCGCGAATGCTT CACTCAGAGATCGGCCCGAGCTCGCGGACAAGCCTGTCGCCGTTGGTGGC GAAAGCATGATAAGCACGACGAACTACCACGCCAGGCTCAAGGGGGTCAG GAGCGCCATGCCGGGCTTCATCGGCAGAAAGCTTTGTCCCGAGCTGGTGT TCGTCAAGCCGGACTACGAAAAGTACACGGTGGTGGCGGAGCAAATACGG GAGATTTTCCGCGAGTACGACCCCCGTATGCGCTCTTACAGTCTGGACGA AGCCTACCTGAACGTCACCAGGGTGTTGACCGAGAGACTGGGGTTGGACG GGTCGAACGCTCCGGCGGGAACAAAAGAGGCAGGGGTGGCGGCGGCGGCG GCAAGGGCGGCGGCAGCGGTTACACCAGAACATGTTTGCTCGGGCACCTA CGAGGCTGAAGCGGACACGAGCCGGCGACGAAGTATGGGCTCAAGTGTAG AGAATATGTACTATGGGCACGAAGAGGATGAGGAAGAGGCGAGGGATGGC CGAAGCGGGGAGAGGAGGAGCCCGAGAGAAACACGACGGGTGAGACTGTT TGAGGCCGCTCGAACCCTGGCGGAAGAGATCAGAGCGAGAATACGGGAAG CTACCAAGCTCACGGCTAGCGTCGGCATCGGTCCGAACTTCATGCTGGCA AAGGTGCGCCAATGAGCAGCTAGATATAGCACGCATAGATAGCCCGCCAC AACAAGAAAACTGCGTCACGTTTCTTGCAGTGGCCCAGATGGTCTCCACG AATGGTTAAGAGAATTGTCGTGAAGGTTATTGCCCTTGTTTCCTGGAGAG CACGCTTGGCCGACGAATGTCTGGGAACGGCCAAGTTCTCGAATTTAGTA GAATCACCCCAACAACACACCCGCCTGATAGTCATAACCATGTCGTTCCT CCATCTGGTGTGTTGCGTTGGAGCGCAGATAGCTTCAGACTGGAATAAGC CGGACGGGCAGATGTGCATAGGGGGTGACCGTGCGGAAGTGCTGCGATTC CTGCACGATCTTCCTGTCCGAAAGGTGAGCGAGTACCTTGTGCAGCGTTT TGATGTTTTTGGCATACGACCGCAGAGGTTTCTCTGCTGCGGTCTCGCGT TGAAGCACGTGGCAGCCCCCTTCGAGGAATCCAGCCTTAGCCTTGTCTCT AAATACGGTGTGTAGGCTTTCGATCTTGTGCGGTTGGACTTGCGTCATCT CAATCCTTTGTCGGTGACTGGTGGTGGATTTCGACGGTGAGCACCAGAGA GGAACGCACGCACTTCTGTGTGCGATGTGGCGAGCACCAGGCAACCCGCT CGGTGTTGCTCGCTTGGCCTTGCCCACGAGAAAGTAGCTGCTCTTTGTGG TGCACGCCTTTTTCTTGTTATTTCCATCTCGTGCGCTTCCTCTTCCACCA CACTGAAAACTACGCGTAGGACCACAGATACCAACTGAGCTGGTACACGT TTCAGCCAGTTCGCCCCGAAAATGCGTCGTTTTCACACCTGCTCTTTTCT TCGTACACGCGTGTGCCTGCAACCCATCCACGTTTTGCTTTCTCGCACAG ATCGGTGGCGTGGGCAAAGTGCAAGAGAAGTGCCTGAGAGAGGCGCTCGG GGTCGTTACCTGCGGGGATCTGTTTAGGGAGCGAGCGTCTGTCATCCATG TCATGACCTCGCACACATCCCGATGGCTGATCAAGGTACACAAAATAGCA ATTGCTTGGCGTTTTTGACATCGTGTGTGCTGCCATCATCCGGTGTCTGA TTGCCAGTTGTGCGCCGTACGTTGTCCCGTATGGTTTATAAAGTGGTGGG TTGGTTTTGTTCAAGGAAAAATAGACTGTCTGCGCTGCGTACAGGGCCAT CGTTGTTTCGCAGGAATGGGCGAGCAACACTCATAATTGACGACGGTCAC AGACCCCGCCCACTTCTCTCCTCCACTCCTTACCTTGTGCCCCTTTTCCT CGACCTCCCGTCTATTCGTTTGCAAGGCTTCGCTTGGTATCGCCTCCGCC GACCATGACGTGGCCACTGAACAGGCGCAGGCGGTGGGTGCCGTCACTCG CAAGCAGATCAGGCGAGTGCTTCCCAAGAATGGCGTTGTCTTTCCCACCG AGATTTTGGCAATTGTCCTAAGAGCGTTTACTTGCTGGCTGGACGCTGGG TGAAGAGATGCCGCTGTGTTGTCCGTCGAAACGCTTGCTTTTTTAAGCAA GTGTCGAGCATGCTGCGTAAGGTTACGCACAATATTGCCATAGCTGATGT AGTAGTAGAGGATGTTGTTGTTGTTGCTGTTGCTGTTGTTGTTGTTGTTG TTGTTGTTTGTTGTGAGCCTGTCGACGAGTACGTGAAGGGCTCCGATAAC TTCCTTTGGTTTTTCGGGTGATATTGAAAGGTGTTCTTGATGTACAGCAT GCGCAGCGGGAAGGACACACCTACGAACCCGATGCGGGGTTTGTCTGGTG GAGACGTTTGCTTGCACGGAATGCAGTGGATTCCATGTAACGATAATATG ACGTTGTCGTGAAGTCTCGTTCTTTCTGCCAAGTACGGCGGGCTGTCTAC TCTCCGTACTCACTTCAACCAAGAGTTGACGAAAAACAAGGACCACCTGT AGCAATTCGTATGAAACCCAACTGTTTGTGGAAGGCTTGTGTGTGCTTCA ATGTAAGCTTTATTTTGTAAATGCTGATGTTGCGGCTTTCGTTCGTGTGT GCTTCAATGTAAGCTTTATTATGTAAATGCTGATGTTGCGGCTATCGTTC ATTTGGTCGGTTCCCTAAATCCAGCAAGGAGCGGACCTTCGGCGAGCTGT CGGCGCCCAGAGACCTCTTAAACAAGTGTCGAGAGATCTGCGACTCCCTC GCGGCCGGTAAGTCTCAAGCGACTTTCGGGATATTTGACCATGCGTAGCC GCTCTTTCTTTTGCCGAGGTCTTCGAGTCGTCGTGCTGGTCATGCCTTTT CGTCGGTTTTCGGCGTTTCGCTTCTCTTTTGTGGGATCATGGTGACTCGT CCCGTGGGTCCATACCGCCTGTCGTTGTTGCGTTTTTTTACCGGCGGTAT TGATGGCCGTTGATTTTGCACCTGTCAAAGCCCACGTCGAATCACGTATC AATCTCGCGGCGCGGGTGAGCCCACTTTCTGATGTTGGGAGATGGATCTG TCTGTTCGCTTCCGTTTTCCTTTCCCACCGCCGATGTTACGGCAATCGGC AAGGCCTGTCTATGCTGTAACGAGTTTCCCAGAAACAGTTTATCTCTGTG TATGTCTTATACGAAAAAATCAACTGAAGAGTGAAGTACTCTACGTACAC TGAAACACGTGTAGTACACGTCTCACCACCAAAAATGGGGGGATGTCGCC ATAATAAGTAGGACGAAAACACACACACACACACACACACACACCAGGCA ACGATGCGCTTGCTCGCGCCAAGCCACCCCCAACTCACCGCGTCGTCTCG CCTTGCATGTCCCCTGCTACCTTCCCCCGGCCTTGGAAAAATAACATGTT CGATCGCGCACCTCCGTGGACGTTCGTTGTCCCCCAAAGAAATGGCAACC AAGGGGCTCGAGGCCAAAACCGTCGGGCTCAAGGTTAAGACCACCAAGTT TCAGGTCCGCACGCAGGACTCCACCGGCCACGCGTACGTCAGCTCGGCGG ACGACCTGTTCTCCGCGGCGTCGGCCCTTCTCCAGCGGGAGATACAGGGC GCTGCCGCCTCCGCCCCGGGGGGGAAGCTGCGCCTCCGGTTGATGGGGGT CAAGGCCTCTGGGTTTCGAGGCCAGGCCGGAGCCCCGATTTTGCCGGGAC AGGCGACGCTTGACGGGTTTCTTTCCTCGAAGGCCGCCCAGGGGGGGTGT CAGGGGGAGGATGGGAGCGGGAACGACGGCAAGCGGCAGCAGAGGGAGGG GGATATGGACACGGCGGCGGGGGTTAAACAACAA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1293:3..5386-

>mRNA_E-fasciculatus_F_contig1293.2220.1 ID=mRNA_E-fasciculatus_F_contig1293.2220.1|Name=mRNA_E-fasciculatus_F_contig1293.2220.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3936bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1293:3..5386- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGTGCTACCACTACTGCTGCTCGTTCCACGCGAAACCCGCCCACGCGCT
CCATCTGTTCACCTCCCTCCGGAGGTCAGGGTTCACAATGGAGAAAGAGA
ATGTGGTGGCTGCCTCGTCGGCGAAAACGCAGCAGCAAAAGCAACCGGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGAGGGTGAATCTACTGCATCTTC
TTCCGCCTCCAGCTCTGCAGCCCACATGTTTGTCTTCTCCAACAATAAGG
CCGGCATGGGGAGTGTGGACAAGGAGAGGGTCAATCGCATCATCTACGAG
ATGAGCAAGAACTCGTCCTACTTTAAGCAGGCTAAGCTTCAGGACGACAA
ACTTGATCAGAAGATGTGCTACCACTACTGCTGCTCGTTCCACGCGAAAC
CCGCCCACGCGCTCCATCTGTTCACCTCCCTCCGGAGGTCAGGGTTCACA
ATGGAGAAAGAGAATGTGGTGGCTGCCTCGTCGGCGAAAACGCAGCAGCA
AAAGCAACCGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGAGGGTGAAT
CTACTGCATCTTCTTCCGCCTCCAGCTCTGCAGCCCACATGTTTGTCTTC
TCCAACAATAAGGCCGGCATGGGGAGTGTGGACAAGGAGAGGGTCAATCG
CATCATCTACGAGATGAGCAAGAACTCGTCCTACTTTAAGCAGGCTAAGC
TTCAGGACGACAAACTTGATCAGAAGGTGGCAGAGATGAGGGTGAAACTC
AGAGCACTGGACGCCGTTCGCAAGGCCCAGCTTACTCGCCAGGCGGACAA
GATAGCGACGGAGCTGGAAAGACAGCGACAGCTCGACGAAGTCTGTCTGG
TGATAGACATGGACATGTTTTATGCGGCCGTGGAAGTCAGGTGGCAGAGA
TGAGGGTGAAACTCAGAGCACTGGACGCCGTTCGCAAGGCCCAGCTTACT
CGCCAGGCGGACAAGATAGCGACGGAGCTGGAAAGACAGCGACAGCTCGA
CGAAGTCTGTCTGGTGATAGACATGGACATGTTTTATGCGGCCGTGGAAG
TCAGAGATCGGCCCGAGCTCGCGGACAAGCCTGTCGCCGTTGGTGGCGAA
AGCATGATAAGCACGACGAACTACCACGCCAGGCTCAAGGGGGTCAGGAG
CGCCATGCCGGGCTTCATCGGCAGAAAGCTTTGTCCCGAGCTGGTGTTCG
TCAAGCCGGACTACGAAAAGTACACGGTGGTGGCGGAGCAAATACGGGAG
ATTTTCCGCGAGTACGACCCCCGTATGCGCTCTTACAGTCTGGACGAAGC
CTACCTGAACGTCACCAGGGTGTTGACCGAGAGACTGGGGTTGGACGGGT
CGAACGCTCCGGCGGGAACAAAAGAGGCAGGGGTGGCGGCGGCGGCGGCA
AGGGCGGCGGCAGCGGTTACACCAGAACATGTTTGCTCGGGCACCTACGA
GGCTGAAGCGGACACGAGCCGGCGACGAAGTATGGGCTCAAGTGTAGAGA
ATATGTACTATGGGCACGAAGAGGATGAGGAAGAGGCGAGGGATGGCCGA
AGCGGGGAGAGGAGGAGCCCGAGAGAAACACGACGGGTGAGACTGTTTGA
GGCCGCTCGAACCCTGGCGGAAGAGATCAGAGCGAGAATACGGGAAGCTA
CCAAGCTCACGGCTAGCGTCGGCATCGGTCCGAACTTCATGCTGGCAAAG
AGATCGGCCCGAGCTCGCGGACAAGCCTGTCGCCGTTGGTGGCGAAAGCA
TGATAAGCACGACGAACTACCACGCCAGGCTCAAGGGGGTCAGGAGCGCC
ATGCCGGGCTTCATCGGCAGAAAGCTTTGTCCCGAGCTGGTGTTCGTCAA
GCCGGACTACGAAAAGTACACGGTGGTGGCGGAGCAAATACGGGAGATTT
TCCGCGAGTACGACCCCCGTATGCGCTCTTACAGTCTGGACGAAGCCTAC
CTGAACGTCACCAGGGTGTTGACCGAGAGACTGGGGTTGGACGGGTCGAA
CGCTCCGGCGGGAACAAAAGAGGCAGGGGTGGCGGCGGCGGCGGCAAGGG
CGGCGGCAGCGGTTACACCAGAACATGTTTGCTCGGGCACCTACGAGGCT
GAAGCGGACACGAGCCGGCGACGAAGTATGGGCTCAAGTGTAGAGAATAT
GTACTATGGGCACGAAGAGGATGAGGAAGAGGCGAGGGATGGCCGAAGCG
GGGAGAGGAGGAGCCCGAGAGAAACACGACGGGTGAGACTGTTTGAGGCC
GCTCGAACCCTGGCGGAAGAGATCAGAGCGAGAATACGGGAAGCTACCAA
GCTCACGGCTAGCGTCGGCATCGGTCCGAACTTCATGCTGGCAAAGATAG
CTTCAGACTGGAATAAGCCGGACGGGCAGATGTGCATAGGGGGTGACCGT
GCGGAAGTGCTGCGATTCCTGCACGATCTTCCTGTCCGAAAGATAGCTTC
AGACTGGAATAAGCCGGACGGGCAGATGTGCATAGGGGGTGACCGTGCGG
AAGTGCTGCGATTCCTGCACGATCTTCCTGTCCGAAAGATCGGTGGCGTG
GGCAAAGTGCAAGAGAAGTGCCTGAGAGAGGCGCTCGGGGTCGTTACCTG
CGGGGATCTGTTTAGGGAGCGAGCGTCTGTCATCCATGTCATGACCTCGC
ACACATCCCGATGGCTGATCAAGATCGGTGGCGTGGGCAAAGTGCAAGAG
AAGTGCCTGAGAGAGGCGCTCGGGGTCGTTACCTGCGGGGATCTGTTTAG
GGAGCGAGCGTCTGTCATCCATGTCATGACCTCGCACACATCCCGATGGC
TGATCAAGGCTTCGCTTGGTATCGCCTCCGCCGACCATGACGTGGCCACT
GAACAGGCGCAGGCGGTGGGTGCCGTCACTCGCAAGCAGATCAGGCTTCG
CTTGGTATCGCCTCCGCCGACCATGACGTGGCCACTGAACAGGCGCAGGC
GGTGGGTGCCGTCACTCGCAAGCAGATCAGCAAGGAGCGGACCTTCGGCG
AGCTGTCGGCGCCCAGAGACCTCTTAAACAAGTGTCGAGAGATCTGCGAC
TCCCTCGCGGCCGCAAGGAGCGGACCTTCGGCGAGCTGTCGGCGCCCAGA
GACCTCTTAAACAAGTGTCGAGAGATCTGCGACTCCCTCGCGGCCGAAAT
GGCAACCAAGGGGCTCGAGGCCAAAACCGTCGGGCTCAAGGTTAAGACCA
CCAAGTTTCAGGTCCGCACGCAGGACTCCACCGGCCACGCGTACGTCAGC
TCGGCGGACGACCTGTTCTCCGCGGCGTCGGCCCTTCTCCAGCGGGAGAT
ACAGGGCGCTGCCGCCTCCGCCCCGGGGGGGAAGCTGCGCCTCCGGTTGA
TGGGGGTCAAGGCCTCTGGGTTTCGAGGCCAGGCCGGAGCCCCGATTTTG
CCGGGACAGGCGACGCTTGACGGGTTTCTTTCCTCGAAGGCCGCCCAGGG
GGGGTGTCAGGGGGAGGATGGGAGCGGGAACGACGGCAAGCGGCAGCAGA
GGGAGGGGGATATGGACACGGCGGCGGGGGTTAAACAACAAAAATGGCAA
CCAAGGGGCTCGAGGCCAAAACCGTCGGGCTCAAGGTTAAGACCACCAAG
TTTCAGGTCCGCACGCAGGACTCCACCGGCCACGCGTACGTCAGCTCGGC
GGACGACCTGTTCTCCGCGGCGTCGGCCCTTCTCCAGCGGGAGATACAGG
GCGCTGCCGCCTCCGCCCCGGGGGGGAAGCTGCGCCTCCGGTTGATGGGG
GTCAAGGCCTCTGGGTTTCGAGGCCAGGCCGGAGCCCCGATTTTGCCGGG
ACAGGCGACGCTTGACGGGTTTCTTTCCTCGAAGGCCGCCCAGGGGGGGT
GTCAGGGGGAGGATGGGAGCGGGAACGACGGCAAGCGGCAGCAGAGGGAG
GGGGATATGGACACGGCGGCGGGGGTTAAACAACAA
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