prot_E-fasciculatus_F_contig12929.2219.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12929.2219.1
Unique Nameprot_E-fasciculatus_F_contig12929.2219.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length148
Homology
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BLAST of mRNA_E-fasciculatus_F_contig12929.2219.1 vs. uniprot
Match: D7FH14_ECTSI (Hypothetical F-box and leucine rich repeat containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FH14_ECTSI)

HSP 1 Score: 285 bits (728), Expect = 1.100e-93
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0 
Query:    1 MLNTATMKMPEDQFLNVLSYLVVDSVFAMSSTCRQLHEWCSLFKAVDAGEEELRNADLALLVRRFPAVNDLTIRSASRLTTAYEVLAEIGPQLVSLKLTGARIIRDDTFRDMVRTFESMRYLSLDGTFYVKSQAINALAKAGQQLQEV 148
            MLNTATMKMPEDQFLNVLSYLVVDSVFAMSSTCRQLHEWCSLFKAVDAGEEELRNADLALLVRRFPAVNDLTIRSASRLTTAYEVLAEIGPQLVSLKLTGARIIRDDTFRDMVRTFESMRYLSLDGTFYVKSQAINALAKAGQQLQEV
Sbjct:    1 MLNTATMKMPEDQFLNVLSYLVVDSVFAMSSTCRQLHEWCSLFKAVDAGEEELRNADLALLVRRFPAVNDLTIRSASRLTTAYEVLAEIGPQLVSLKLTGARIIRDDTFRDMVRTFESMRYLSLDGTFYVKSQAINALAKAGQQLQEV 148
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12929.2219.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FH14_ECTSI1.100e-93100.00Hypothetical F-box and leucine rich repeat contain... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 6..148
e-value: 3.8E-11
score: 44.5
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 7..41

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12929contigE-fasciculatus_F_contig12929:281..3475 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12929.2219.1mRNA_E-fasciculatus_F_contig12929.2219.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12929 281..3475 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12929.2219.1 ID=prot_E-fasciculatus_F_contig12929.2219.1|Name=mRNA_E-fasciculatus_F_contig12929.2219.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=148bp
MLNTATMKMPEDQFLNVLSYLVVDSVFAMSSTCRQLHEWCSLFKAVDAGE
EELRNADLALLVRRFPAVNDLTIRSASRLTTAYEVLAEIGPQLVSLKLTG
ARIIRDDTFRDMVRTFESMRYLSLDGTFYVKSQAINALAKAGQQLQEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036047F-box-like_dom_sf
IPR032675LRR_dom_sf