prot_E-fasciculatus_F_contig12922.2214.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12922.2214.1
Unique Nameprot_E-fasciculatus_F_contig12922.2214.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length350
Homology
BLAST of mRNA_E-fasciculatus_F_contig12922.2214.1 vs. uniprot
Match: A0A6H5JXY9_9PHAE (ATP-dependent DNA helicase RecG n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXY9_9PHAE)

HSP 1 Score: 481 bits (1239), Expect = 8.080e-156
Identity = 281/357 (78.71%), Postives = 303/357 (84.87%), Query Frame = 0
Query:    1 PLAASSPPTDGVVARAEATGGVSG---SPTKTAPDG-GKELGLEVPVPAAAAAVYFDDEADFLEKSASEYAEMMRDQDEEDEYLSGFSFAPXXXXXXXXXXXXXXXXXXXXXXP---SGGVASAGSPVESGSSTPSGAGVAIIPRANLSEGSHTLVLVDVETTGLQAKQGRVIQLAAKVLGSEDPGHSFAEYIDPGTVGVPAKVREITGITPEILAANGARPFPEVWPKFAEWLSGVVAEEQGQGRGESGVVFVAHNAQFDYRFLKEELSRCGFSRFMMGQDMGVVSVVDSLKCLKEDSLWRQRASDFNMPTRPNTFKLGGVFEHLYGYEMPGAHDALGDVVGLERILSAPGIKERW 350
            PLAASS   D VV RAEAT GV G   S T T PD   KE G E+ VPAA   VYFDDEADFLEKSASEYAEMM DQDEEDEYLSGFSFAP    XXXXXXXXXXXXXXXXXX    SGGVA  G+PV      PSG GVAII RA+LSEG+HT+V+VDVETTGL+AK+ RVIQLAAKVLGSE+P HSFAEYIDPG VGVP +VREITGITPEILAANGARPFP+VWP+FA WLSGVVAEEQ +GRGE GVVFVAHNAQFD++FLKEELSRCGFSRFMMGQDMGVV +VDSL+CLKE+SLWRQ+ASDF+MPTRP  FKLGGVFEHLYGYEMP AH+A+GDVVGLERILSAPGI E W
Sbjct:  995 PLAASSSTPDFVV-RAEATAGVGGVLDSRTTTGPDSRSKEPGPELAVPAA---VYFDDEADFLEKSASEYAEMMEDQDEEDEYLSGFSFAPPLQPXXXXXXXXXXXXXXXXXXXXXFSGGVAPTGTPVGGXXGAPSGEGVAIIRRADLSEGTHTVVVVDVETTGLRAKEDRVIQLAAKVLGSENPRHSFAEYIDPGVVGVPPRVREITGITPEILAANGARPFPQVWPEFAAWLSGVVAEEQAEGRGEGGVVFVAHNAQFDHKFLKEELSRCGFSRFMMGQDMGVVCIVDSLRCLKENSLWRQKASDFHMPTRPKNFKLGGVFEHLYGYEMPNAHNAMGDVVGLERILSAPGINEGW 1347          
BLAST of mRNA_E-fasciculatus_F_contig12922.2214.1 vs. uniprot
Match: D7FPN7_ECTSI (ATP-dependent DNA helicase RecG n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPN7_ECTSI)

HSP 1 Score: 466 bits (1199), Expect = 1.300e-153
Identity = 272/353 (77.05%), Postives = 298/353 (84.42%), Query Frame = 0
Query:    1 PLAASSPPTDGVVARAEATG--GVSGSPTKTAP-DGGKELGLEVPVPAAAAAVYFDDEADFLEKSASEYAEMMRDQDEEDEYLSGFSFAPXXXXXXXXXXXXXXXXXXXXXXPSGGVASAGSPVESGSSTPSGAGVAIIPRANLSEGSHTLVLVDVETTGLQAKQGRVIQLAAKVLGSEDPGHSFAEYIDPGTVGVPAKVREITGITPEILAANGARPFPEVWPKFAEWLSGVVAEEQGQGRGESGVVFVAHNAQFDYRFLKEELSRCGFSRFMMGQDMGVVSVVDSLKCLKEDSLWRQRASDFNMPTRPNTFKLGGVFEHLYGYEMPGAHDALGDVVGLERILSAPGIKERW 350
            P ++SS P     A AEAT   GVSGS     P   GKE G E+ VPAA   VYFDDEADFLEKSASEYAEMM  QDEEDEYLSGFSFAPXXXXXXXXXXXXXXXXXXXXXX SG VA  G PV +      G GVAII RA+LSEG+HT+V+VDVETTGL+AK+ RVIQLAAKVLGSE+P HSFAE++DPG VGVP +VREITGITPEILAANGARPFP+VWP+FA WLSGVVAEEQ +GRGE GVVFVAHNAQFD++FLKEE+SRCGFSRFMMGQDMGVV +VDSL+CLKE SLWRQ+ASDF+MPTRP  FKLGGVFEHLYGYEMP AH+A+GDVVGLERILSAPGI E W
Sbjct:  599 PASSSSAPDFAARAEAEATAAVGVSGSRMTAGPGSSGKEPGPELAVPAA---VYFDDEADFLEKSASEYAEMMEGQDEEDEYLSGFSFAPXXXXXXXXXXXXXXXXXXXXXXSSGEVAPTGPPVGADGGASRGEGVAIIRRADLSEGTHTVVVVDVETTGLRAKEDRVIQLAAKVLGSENPRHSFAEFVDPGAVGVPPRVREITGITPEILAANGARPFPQVWPEFAAWLSGVVAEEQAEGRGEGGVVFVAHNAQFDHKFLKEEVSRCGFSRFMMGQDMGVVCIVDSLRCLKESSLWRQKASDFHMPTRPKNFKLGGVFEHLYGYEMPDAHNAMGDVVGLERILSAPGINEGW 948          
BLAST of mRNA_E-fasciculatus_F_contig12922.2214.1 vs. uniprot
Match: A0A7S1Z4X3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z4X3_9STRA)

HSP 1 Score: 115 bits (288), Expect = 6.140e-25
Identity = 72/218 (33.03%), Postives = 112/218 (51.38%), Query Frame = 0
Query:  149 VLVDVETTGLQAKQGRVIQLAAKVLGSEDPGHSFAEYIDPGTVGVPAKVREITGITPEILAANGARP------------FPEVWPKFAEWLSGVVAEEQGQGRGESGVVFVAHNAQFDYRFLKEELSRCGFSRFMMGQ----------DMGVVSVVDSLKCLKEDSLWRQRASDFNMPTRPNTFKLGGVFEHLYGYEMPGAHDALGDVVGLERILSAP 344
            +++D+ETTGL  K   + Q+AAKVLGS DP   F+ Y+ P  V VP  + ++TGI    L   G  P            F +V+  F  +      +E+ +GR    +  +AHNA FD   L+  + R   S   +G+          D G+ + VD+L+ +K + LWR   +  +   RP++F L  V+ H+    M  AH+A+GD++GLE IL +P
Sbjct:  264 LILDLETTGLCTKSSYITQIAAKVLGSTDPSDIFSAYVRP-PVRVPPHIEKLTGIKDHFLRHGGMDPSTGEMLHGPADEFYDVYVHFCAFC-----KEKSEGRP---ICIMAHNAAFDINMLQAHVRRLAASYQKLGKTGKELPFLTRDTGIQTSVDTLQMMKTNKLWRSSRTYSSALPRPSSFGLSNVYSHILKKPMKTAHNAVGDILGLEEILMSP 472          
BLAST of mRNA_E-fasciculatus_F_contig12922.2214.1 vs. uniprot
Match: A0A7S3UQS9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UQS9_HETAK)

HSP 1 Score: 105 bits (263), Expect = 1.930e-23
Identity = 72/169 (42.60%), Postives = 90/169 (53.25%), Query Frame = 0
Query:  148 LVLVDVETTGLQAKQGRVIQLAAKVLGSEDPGHSFAEYIDPGTVGVPAK-VREITGITPEILAANGARPFPEVWPKFAEWLSGVVAEEQGQGRGESGVVFVAHNAQFDYRFLKEELSRC----------------GFSRFMMGQDMGVVSVVDSLKCLKEDSLWRQRAS 299
            +VL+DVETTGL A + RV+QLAAKVLGS  PG +FA YI P      A+  RE+TGIT E+L   GA PF E W  F  WL+               VV VAHNA FD RFL+ E+ R                    R  + ++  V +VV + K LK+ SLW  RA+
Sbjct:   42 IVLLDVETTGLDAGRHRVLQLAAKVLGSRAPGAAFATYIRPPENTPWAEGAREVTGITWEVLEKEGALPFSEAWALFRRWLA--------------EVVLVAHNAPFDRRFLEAEIERLLPNVGGXXXXXXXXXXXXXRGALARE-NVAAVVCTWKLLKDRSLWAPRAA 195          
BLAST of mRNA_E-fasciculatus_F_contig12922.2214.1 vs. uniprot
Match: A0A6U4I7J2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4I7J2_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 8.880e-19
Identity = 78/239 (32.64%), Postives = 108/239 (45.19%), Query Frame = 0
Query:  157 GLQAKQGRVIQLAAKVLGSEDPGHSFAEYIDPGTVGVPAKVREITGITPEILAANGARPFPEVWPKFAEWLS------GVVAE----------EQGQGRGE-------------------SGVVFVAHNAQFDYRFLKEELSRCGFSR----------FMMGQDMGVVSVVDSLKCLKEDSLWRQRASDFNMPTRPNTFKLGGVFEHLYGYEMPGAHDALGDVVGLERILSAPGIKERW 350
            G Q+     +  +A  +G+ D G  F+ ++ P   GVP  V ++TGI  + L    A+PFP VW  F +WL+      G+ A           E G+   E                     VVF AHNA FD R L  EL R G +           F  GQ+ GVVS + +L+  +  ++W     D  +P  P+ +K   +FEHL G EM  AH+A GDV+GLERIL        W
Sbjct: 1129 GTQSASPSDVDKSAAFVGNHD-GMLFSRFVQPSK-GVPEVVAKLTGIDDDRLREAEAQPFPAVWKDFRKWLARQRLQAGIKAAVLDKMSRLSFEDGREEAELYEELAGYAAGIDPESVPLPPVVFAAHNAPFDSRMLLAELQRHGEALNLPASGLAFGFGFGQE-GVVSFMCTLRLFRNKAVWH----DMRVPAPPS-YKQEVIFEHLVGEEMSAAHNAAGDVLGLERILVESSAGPIW 1359          
BLAST of mRNA_E-fasciculatus_F_contig12922.2214.1 vs. uniprot
Match: A0A7S3RKQ1_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3RKQ1_EMIHU)

HSP 1 Score: 79.0 bits (193), Expect = 3.330e-13
Identity = 70/202 (34.65%), Postives = 90/202 (44.55%), Query Frame = 0
Query:  152 DVETTGLQAKQGRVIQLAAKVLGSE-DPGHSFAEY------IDPGTVGVPAKVREITGITPEILAANGARPFPEVWPKFAEWLSGVVAEEQGQGRGESGVVFVAHNAQFDYRFLKEELSRCGFSRFMMGQDMGVVSVVDSLKCLKEDSLWRQRASDFNMP--TR--PNTFKLGGVFEHLY--GYEMPGAHDALGDVVGLERI 340
            D+ETTGL   +  ++Q A  V  S  + G SF E+      IDPG   V       TGIT ++LA  GARPF EVW  F  WL   +  E         +V+ AHN     RF    L RC     +     G   ++   +    D+L   RA+    P  TR  P  F LG +FE     G  + GAHDAL D   L R+
Sbjct:   51 DLETTGLNTDEAEIVQFACVVANSRREGGASFCEFVMPQCEIDPGASAV-------TGITKQLLAERGARPFAEVWATFEGWLRETLVSETRP------LVWSAHNGD---RFDVPILRRC-----VRDATGGPSPLLSEPRAAFVDTLPLARAALRPRPRYTRGAPGPFTLGALFERASPRGGALEGAHDALVDAEALARV 231          
BLAST of mRNA_E-fasciculatus_F_contig12922.2214.1 vs. uniprot
Match: A0A2G0CGV1_9BACT (DNA polymerase III subunit epsilon n=5 Tax=Lewinella TaxID=70994 RepID=A0A2G0CGV1_9BACT)

HSP 1 Score: 75.5 bits (184), Expect = 2.360e-11
Identity = 58/192 (30.21%), Postives = 91/192 (47.40%), Query Frame = 0
Query:  150 LVDVETTGLQAKQGRVIQLAAKVLGSEDPGHSFAEYIDPGTVGVPAKVREITGITPEILAANGARPFPEVWPKFAEWLSGVVAEEQGQGRGESGVVFVAHNAQFDYRFLKEELSRCGFSRFMMGQDMGVVSVVDSLKCLKEDSLWRQRASDFNMPTRPNTFKLGGVFEHLYGYEMPGAHDALGDVVGLERIL 341
            +VD+ETTG +A + R+ ++   V   E    ++   IDP    +PA + E+TGIT E++A           PKF E    +V   +G+       +FVAHNA+FDY FL+ E  R G++ F   Q   + +V  + KC                P  P+ + LG +  H +G+++   H AL D      +L
Sbjct:    8 IVDIETTGGRASRSRITEIGIVVYDGEKVTETYETLIDPEQY-IPAGIVELTGITQEMVAGQ---------PKFYEVAKRIVELTEGR-------IFVAHNAKFDYGFLRAEFGRLGYT-FSRRQ---LCTVRLARKCF---------------PGLPS-YSLGNLIRH-FGFQVDARHRALADAQATTELL 161          
BLAST of mRNA_E-fasciculatus_F_contig12922.2214.1 vs. uniprot
Match: A0A7C1WBY2_9PROT (DNA-directed DNA polymerase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A7C1WBY2_9PROT)

HSP 1 Score: 70.5 bits (171), Expect = 6.690e-11
Identity = 70/198 (35.35%), Postives = 95/198 (47.98%), Query Frame = 0
Query:  149 VLVDVETTGLQAKQG-RVIQLAAKVLGSEDPGHSFAEYIDPGTVG--VPAKVREITGITPEILAANGARPFPE-VWPKFAEWLSGVVAEEQGQGRGESGVVFVAHNAQFDYRFLKEELSRCGFSRFMMGQDMGVVSVVDSLKCLKEDSLWRQRASDFNMPTRPNTFKLGGVFEHLYGYEMPG--AHDALGDVVGLERI 340
            V++DVETTGL    G RVI++ A  +   + G + AE+     V   +P  V++I GIT E+L  N   P PE V+P+F E++            G S  + VAHNAQFD RFL+ EL R G            + + +  +C  E S  R        P  PN  KL  VF HL+G       AH AL D   + R+
Sbjct:    4 VVLDVETTGLSPVNGDRVIEVGAVAI---EAGIALAEFHSLVFVRKPIPTLVQQIHGITNEMLVGN---PEPEEVFPRFREFI------------GNS--ILVAHNAQFDIRFLQHELGRLG------------LGLNNRYRCTLEMSRKRY-------PWLPN-HKLETVFRHLFGKSTTETQAHRALSDARMVARV 161          
BLAST of mRNA_E-fasciculatus_F_contig12922.2214.1 vs. uniprot
Match: A0A1V5MS93_9BACT (DNA polymerase III PolC-type n=1 Tax=Bacteroidetes bacterium ADurb.Bin408 TaxID=1852813 RepID=A0A1V5MS93_9BACT)

HSP 1 Score: 70.1 bits (170), Expect = 1.170e-10
Identity = 58/192 (30.21%), Postives = 88/192 (45.83%), Query Frame = 0
Query:  150 LVDVETTGLQAKQGRVIQLAAKVLGSEDPGHSFAEYIDPGTVGVPAKVREITGITPEILAANGARPFPEVWPKFAEWLSGVVAEEQGQGRGESGVVFVAHNAQFDYRFLKEELSRCGFSRFMMGQDMGVVSVVDSLKCLKEDSLWRQRASDFNMPTRPNTFKLGGVFEHLYGYEMPGAHDALGDVVGLERIL 341
            ++D+ETTG   K GR+ ++A  V   E     F   I+P  V +P  +  +TGIT E++A           P+F E ++G + EE  +GR     +FVAHN  FDY+F++EE SR G+                         L   + S   +P   + + LG + E L G E+   H A GD +   R+ 
Sbjct:    4 IIDIETTGTVYKYGRITEIALYVHNGERVTEQFQTLINP-EVDIPLYITRMTGITNEMVATA---------PRFYE-IAGKL-EELTEGR-----IFVAHNVNFDYQFIREEFSRIGY-------------------IFNRKKLCTVQLSRKFLPGHAS-YSLGRLCEEL-GIELNDRHRASGDALATVRLF 157          
BLAST of mRNA_E-fasciculatus_F_contig12922.2214.1 vs. uniprot
Match: UPI001EE81B9F (exonuclease domain-containing protein n=1 Tax=Lewinella maritima TaxID=1383882 RepID=UPI001EE81B9F)

HSP 1 Score: 73.2 bits (178), Expect = 1.360e-10
Identity = 57/194 (29.38%), Postives = 88/194 (45.36%), Query Frame = 0
Query:  150 LVDVETTGLQAKQGRVIQLAAKVLGSEDPGHSFAEYIDPGTVGVPAKVREITGITPEILAANGARPFPEVWPKFAEWLSGVVAEEQGQGRGESGVVFVAHNAQFDYRFLKEELSRCG--FSRFMMGQDMGVVSVVDSLKCLKEDSLWRQRASDFNMPTRPNTFKLGGVFEHLYGYEMPGAHDALGDVVGLERIL 341
            +VD+ETTG +A + R+ ++   V   E    +F   +DP    +PA + E+TGIT E++            PKF E    +V   +G+       +FVAHNA+FDY FL+EE  R G  FSR  +       +V  + KC                     ++ LG + +H +G+ +   H AL D      +L
Sbjct:    8 IVDIETTGSRASRARITEIGIVVFDGEKVTETFETLLDPEQY-IPAGIVELTGITQEMVKGK---------PKFYEVAKRIVELTEGR-------IFVAHNAKFDYGFLREEFGRLGYTFSRRKL------CTVRLTRKCFPG----------------LKSYSLGKLIQH-FGFTVEARHRALADAQATTELL 161          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12922.2214.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JXY9_9PHAE8.080e-15678.71ATP-dependent DNA helicase RecG n=1 Tax=Ectocarpus... [more]
D7FPN7_ECTSI1.300e-15377.05ATP-dependent DNA helicase RecG n=1 Tax=Ectocarpus... [more]
A0A7S1Z4X3_9STRA6.140e-2533.03Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S3UQS9_HETAK1.930e-2342.60Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A6U4I7J2_9STRA8.880e-1932.64Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S3RKQ1_EMIHU3.330e-1334.65Hypothetical protein (Fragment) n=1 Tax=Emiliania ... [more]
A0A2G0CGV1_9BACT2.360e-1130.21DNA polymerase III subunit epsilon n=5 Tax=Lewinel... [more]
A0A7C1WBY2_9PROT6.690e-1135.35DNA-directed DNA polymerase n=1 Tax=Proteobacteria... [more]
A0A1V5MS93_9BACT1.170e-1030.21DNA polymerase III PolC-type n=1 Tax=Bacteroidetes... [more]
UPI001EE81B9F1.360e-1029.38exonuclease domain-containing protein n=1 Tax=Lewi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013520Exonuclease, RNase T/DNA polymerase IIISMARTSM00479exoiiienduscoord: 147..350
e-value: 9.4E-9
score: 45.1
IPR013520Exonuclease, RNase T/DNA polymerase IIIPFAMPF00929RNase_Tcoord: 149..274
e-value: 2.2E-15
score: 57.6
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 146..347
e-value: 3.1E-35
score: 123.7
NoneNo IPR availablePANTHERPTHR13058THREE PRIME REPAIR EXONUCLEASE 1, 2coord: 143..342
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 146..341

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12922contigE-fasciculatus_F_contig12922:6..3343 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12922.2214.1mRNA_E-fasciculatus_F_contig12922.2214.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12922 6..3343 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12922.2214.1 ID=prot_E-fasciculatus_F_contig12922.2214.1|Name=mRNA_E-fasciculatus_F_contig12922.2214.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=350bp
PLAASSPPTDGVVARAEATGGVSGSPTKTAPDGGKELGLEVPVPAAAAAV
YFDDEADFLEKSASEYAEMMRDQDEEDEYLSGFSFAPPPPPPSQAARRQR
QQQQQHERRPSGGVASAGSPVESGSSTPSGAGVAIIPRANLSEGSHTLVL
VDVETTGLQAKQGRVIQLAAKVLGSEDPGHSFAEYIDPGTVGVPAKVREI
TGITPEILAANGARPFPEVWPKFAEWLSGVVAEEQGQGRGESGVVFVAHN
AQFDYRFLKEELSRCGFSRFMMGQDMGVVSVVDSLKCLKEDSLWRQRASD
FNMPTRPNTFKLGGVFEHLYGYEMPGAHDALGDVVGLERILSAPGIKERW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf
IPR036397RNaseH_sf
IPR013520Exonuclease_RNaseT/DNA_pol3