prot_E-fasciculatus_F_contig12921.2213.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12921.2213.1
Unique Nameprot_E-fasciculatus_F_contig12921.2213.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length148
Homology
BLAST of mRNA_E-fasciculatus_F_contig12921.2213.1 vs. uniprot
Match: D8LNJ0_ECTSI (Vesicle coat complex COPI, beta sub-unit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNJ0_ECTSI)

HSP 1 Score: 256 bits (655), Expect = 8.820e-83
Identity = 134/142 (94.37%), Postives = 136/142 (95.77%), Query Frame = 0
Query:    6 QTAVVRKDFETANSILPSIPKGEYTAVARFLESQGFKDEAFQDLGGLLLLHSSTGNREGMLALAEDARKAGRTNVAFLSLFVCGKVEECLELLVSAGRVPEAAFMARTYLPSAMGRLVELWKKDLATVSAKVRWTAVVFVIV 147
            QTAVVRKDFETANSILPSIPKGEYTAVARFLESQGFKDEAFQDLGGLLLLHSSTGNREGMLALAEDARKAGRTNVAFLSLFVCGKVEECLELLVSAGRVPEAAFMARTYLPSAMGRLVELWKKDLATVSAKV     V ++V
Sbjct:  220 QTAVVRKDFETANSILPSIPKGEYTAVARFLESQGFKDEAFQDLGGLLLLHSSTGNREGMLALAEDARKAGRTNVAFLSLFVCGKVEECLELLVSAGRVPEAAFMARTYLPSAMGRLVELWKKDLATVSAKVLLLVAVVLVV 361          
BLAST of mRNA_E-fasciculatus_F_contig12921.2213.1 vs. uniprot
Match: A0A835YRX4_9STRA (Coatomer WD associated region-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRX4_9STRA)

HSP 1 Score: 174 bits (442), Expect = 9.110e-48
Identity = 103/197 (52.28%), Postives = 114/197 (57.87%), Query Frame = 0
Query:    6 QTAVVRKDFETANSILPSIPKGEYTAVARFLESQGFKDEAFQ------------------------------------------------------------------DLGGLLLLHSSTGNREGMLALAEDARKAGRTNVAFLSLFVCGKVEECLELLVSAGRVPEAAFMARTYLPSAMGRLVELWKKDLATVSAK 136
            QTAVVRKDFE AN++LPSIP  EYTAVARFLESQGFK+EA                                                                    DLGGLLLLHSSTGN  G+ ALA DA KAG+TNV FL+LF+ G++EECLELLV AGR+PEAAFMARTYLPS M RLVELWKKDL +VS K
Sbjct:  599 QTAVVRKDFEAANALLPSIPASEYTAVARFLESQGFKEEALAVSRDPDHRFDLACELGKLALARELLDAIPPAEYDTLDSQTKWKRLGDLALSECDMALVEKCAANSGDLGGLLLLHSSTGNAAGLAALAADAAKAGKTNVGFLALFLLGRLEECLELLVKAGRLPEAAFMARTYLPSEMPRLVELWKKDLQSVSVK 795          
BLAST of mRNA_E-fasciculatus_F_contig12921.2213.1 vs. uniprot
Match: A0A6H5K868_9PHAE (Coatomer_WDAD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K868_9PHAE)

HSP 1 Score: 155 bits (392), Expect = 1.420e-41
Identity = 103/181 (56.91%), Postives = 108/181 (59.67%), Query Frame = 0
Query:    6 QTAVVRKDFETANSILPSIPKGEYTAVARFLESQGFKDEAFQ-------------DLGGLLLLHS----------------STGNREGMLALAEDA-RKAGRTNVAFLS--------------------LFVCGKVEECLELLVSAGRVPEAAFMARTYLPSAMGRLVELWKKDLATVSAK 136
            QTAVVRKDFETANSILPSIPKGEYTAVARFLESQGFKDEAFQ             +LG L                     S   R G LAL   A R A + + A +S                        G+VEECLELLVSAGRVPEAAFMARTYLPSAMGRLVELWKKDLATVSAK
Sbjct:   67 QTAVVRKDFETANSILPSIPKGEYTAVARFLESQGFKDEAFQVSLDPEHKFDLALELGKLTDARQILDEMPKEEYDTTDAQSKWKRLGDLALTNTAQRSAAQRSAAAVSYDPGENKTATATITTRTTPRFLWAGQVEECLELLVSAGRVPEAAFMARTYLPSAMGRLVELWKKDLATVSAK 247          
BLAST of mRNA_E-fasciculatus_F_contig12921.2213.1 vs. uniprot
Match: A0A7S2XXQ5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXQ5_9STRA)

HSP 1 Score: 144 bits (364), Expect = 2.920e-37
Identity = 85/197 (43.15%), Postives = 108/197 (54.82%), Query Frame = 0
Query:    6 QTAVVRKDFETANSILPSIPKGEYTAVARFLESQGFKDEAFQ------------------------------------------------------------------DLGGLLLLHSSTGNREGMLALAEDARKAGRTNVAFLSLFVCGKVEECLELLVSAGRVPEAAFMARTYLPSAMGRLVELWKKDLATVSAK 136
            QTAVVRKDF+ AN++LPSIP  E++ VARFLESQGFK EA                                                                    D+ GLLLL++STG+  GM+ LA  A+K GRTNVAFL+LF+ G+VEECL+LLV + R+PEAAFMARTYLPS + R+V+LWK++L   S +
Sbjct:  597 QTAVVRKDFDAANALLPSIPVSEHSDVARFLESQGFKQEAMAVTRDPEHKFDLALELGLLEEAQTLLSEQPAEDAETTEGQSKWRRLGDLALQKGKLDLVEQCALTSGDVSGLLLLYTSTGSTAGMVDLAAQAKKLGRTNVAFLALFLLGRVEECLDLLVESNRIPEAAFMARTYLPSQVSRIVKLWKEELGKTSER 793          
BLAST of mRNA_E-fasciculatus_F_contig12921.2213.1 vs. uniprot
Match: A0A7S2G0J9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G0J9_9STRA)

HSP 1 Score: 134 bits (336), Expect = 3.650e-35
Identity = 80/197 (40.61%), Postives = 101/197 (51.27%), Query Frame = 0
Query:    6 QTAVVRKDFETANSILPSIPKGEYTAVARFLESQGFKDEAFQ------------------------------------------------------------------DLGGLLLLHSSTGNREGMLALAEDARKAGRTNVAFLSLFVCGKVEECLELLVSAGRVPEAAFMARTYLPSAMGRLVELWKKDLATVSAK 136
            QTAVVR D E AN ILPSIP+ E+ +VARFLESQG K+EA                                                                    D  GLLLL++ TGN EG   LA  A++ G+TNVAF+SLF+ G++EEC+ELL+  GR+PEAAF+ARTY+PS M ++V  WK DL  VS +
Sbjct:   74 QTAVVRDDIEAANEILPSIPESEHNSVARFLESQGLKEEALGVTKDPDQKFDLSLELGKLDVAYEILLQIPEADKDTTDTQSKWKRLGDLALSTGDLPRAEQCAEASGDTAGLLLLYTCTGNAEGAKKLAVQAKELGKTNVAFISLFLLGRIEECIELLMQTGRIPEAAFLARTYMPSEMPQIVIKWKADLTKVSER 270          
BLAST of mRNA_E-fasciculatus_F_contig12921.2213.1 vs. uniprot
Match: A0A7S2EB92_TRICV (Coatomer subunit beta' n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EB92_TRICV)

HSP 1 Score: 138 bits (348), Expect = 3.840e-35
Identity = 82/195 (42.05%), Postives = 101/195 (51.79%), Query Frame = 0
Query:    6 QTAVVRKDFETANSILPSIPKGEYTAVARFLESQGFKDEAF------------------------------------------------------------------QDLGGLLLLHSSTGNREGMLALAEDARKAGRTNVAFLSLFVCGKVEECLELLVSAGRVPEAAFMARTYLPSAMGRLVELWKKDLATVS 134
            QTAV+R DF+ AN +LPSIP+ EYTAVARFLESQGFK+EA                                                                    D  GLLLL+S+TGN EGM  LA+ A K G+TNVAF++  + G VE C +LL+S  R+PEAAF ARTYLPS +  +V LWK+DL+ VS
Sbjct:  450 QTAVMRGDFDAANELLPSIPESEYTAVARFLESQGFKEEAMAVTTDPDHKFDLALELGHIDVAHNLLNETPDEDRDSTDTMGKWKRLSDAALKVSDLGLCESASISSNDFSGLLLLYSATGNSEGMETLAKSAEKGGKTNVAFVAYLLTGNVEACADLLISTKRLPEAAFFARTYLPSRVNEIVSLWKEDLSKVS 644          
BLAST of mRNA_E-fasciculatus_F_contig12921.2213.1 vs. uniprot
Match: A0A2C9KDB7_BIOGL (Coatomer_WDAD domain-containing protein n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9KDB7_BIOGL)

HSP 1 Score: 137 bits (344), Expect = 5.920e-35
Identity = 80/189 (42.33%), Postives = 101/189 (53.44%), Query Frame = 0
Query:    6 QTAVVRKDFETANSILPSIPKGEYTAVARFLESQGFKDEAF----------------------------------------------------------QDLGGLLLLHSSTGNREGMLALAEDARKAGRTNVAFLSLFVCGKVEECLELLVSAGRVPEAAFMARTYLPSAMGRLVELWKKDLATVSAK 136
            QTAV+R+DF+TA+ +LP++P+ + T VA FLE QGFK +A                                                            D GGLLLL SS GNRE +  L E A K+G+ NVAFLS FV GK EECLE+L++ GR+PEAAF ARTYLPS + R+V LWKK +A V+ K
Sbjct:  215 QTAVMRRDFDTADKVLPTVPREQRTRVAHFLEKQGFKSQAMAVTCDPEHKFELAIQLGDLRTAYELAKETQSDQKWKQLAELAIKRCEFGLAQECLHQAHDYGGLLLLASSAGNREMVSKLGEAAEKSGQNNVAFLSNFVLGKCEECLEILINTGRLPEAAFFARTYLPSQISRVVSLWKKSVANVNKK 403          
BLAST of mRNA_E-fasciculatus_F_contig12921.2213.1 vs. uniprot
Match: A0A1S3J2M3_LINUN (Coatomer subunit beta' n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3J2M3_LINUN)

HSP 1 Score: 136 bits (342), Expect = 2.630e-34
Identity = 78/189 (41.27%), Postives = 103/189 (54.50%), Query Frame = 0
Query:    6 QTAVVRKDFETANSILPSIPKGEYTAVARFLESQGFKDEAF----------------------------------------------------------QDLGGLLLLHSSTGNREGMLALAEDARKAGRTNVAFLSLFVCGKVEECLELLVSAGRVPEAAFMARTYLPSAMGRLVELWKKDLATVSAK 136
            QTAV+R+DF+TA+ +LP+IP+ + T VA FLE QGFK +A                                                           QD GGLLLL SS GN E +  L E AR +G+ NV+FLS F  GK+EECLE+L+S GR+PEAAF ARTYLPS + R+V+LW++ L+T++ K
Sbjct:  595 QTAVMRRDFDTADKVLPTIPREQRTRVAHFLEKQGFKSQALAVTTDPEHKFELSLGLGDLKTSYQIAKESESEQKWKQLAELATSKCEFGLAQECLHQAQDFGGLLLLASSAGNTEMVQKLGETARASGQNNVSFLSYFALGKLEECLEVLISTGRLPEAAFFARTYLPSQISRVVQLWREHLSTINKK 783          
BLAST of mRNA_E-fasciculatus_F_contig12921.2213.1 vs. uniprot
Match: A0A8J1TRJ5_OWEFU (Coatomer subunit beta' n=2 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1TRJ5_OWEFU)

HSP 1 Score: 135 bits (341), Expect = 3.600e-34
Identity = 80/189 (42.33%), Postives = 99/189 (52.38%), Query Frame = 0
Query:    6 QTAVVRKDFETANSILPSIPKGEYTAVARFLESQGFKDEAF----------------------------------------------------------QDLGGLLLLHSSTGNREGMLALAEDARKAGRTNVAFLSLFVCGKVEECLELLVSAGRVPEAAFMARTYLPSAMGRLVELWKKDLATVSAK 136
            QTAV+R+DFETA+ +LP+IP+ + T VA FLE QGFK +A                                                           QD GGLLLL SS GN   +  L E A K G+ NVAFLS F  G++E CLE+L+S GR+PEAAF ARTY+PS +  +VELWKKDLA V+ K
Sbjct:  595 QTAVMRQDFETADKVLPTIPREQRTRVAHFLEKQGFKSQALAVTCDPEHKFELALHLGDLKIAYTLAKEAESEQKWKQLAELATSKCEMGLAQECLHQAQDFGGLLLLASSAGNGRMVAKLGETAEKTGQNNVAFLSYFSLGQIERCLEVLISTGRLPEAAFFARTYMPSRVSGIVELWKKDLAKVNVK 783          
BLAST of mRNA_E-fasciculatus_F_contig12921.2213.1 vs. uniprot
Match: V4BQF1_LOTGI (Coatomer subunit beta' n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4BQF1_LOTGI)

HSP 1 Score: 135 bits (340), Expect = 4.900e-34
Identity = 76/189 (40.21%), Postives = 103/189 (54.50%), Query Frame = 0
Query:    6 QTAVVRKDFETANSILPSIPKGEYTAVARFLESQGFKDEAF----------------------------------------------------------QDLGGLLLLHSSTGNREGMLALAEDARKAGRTNVAFLSLFVCGKVEECLELLVSAGRVPEAAFMARTYLPSAMGRLVELWKKDLATVSAK 136
            QTAV+R+DF+TA+ +LP++P+ + T VA FLE QGFK +A                                                           QD GGL+LL SS GNR+ +  L   A KAG+ NVAFLS F  G+VEECL++L+  GR+PEAAF ARTYLPS + R+V+LW+++LAT++ K
Sbjct:  595 QTAVMRRDFDTADKVLPTVPREQRTRVAHFLEKQGFKSQALAVTCDPEHKFELAIQLGDLKIAYTLAKEAESEQKWKQLSELAIKNCEFGLAQECLHQAQDFGGLMLLASSAGNRDMVERLGHTAEKAGQNNVAFLSYFTLGRVEECLDVLIKTGRLPEAAFFARTYLPSQISRVVKLWRENLATINKK 783          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12921.2213.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNJ0_ECTSI8.820e-8394.37Vesicle coat complex COPI, beta sub-unit n=1 Tax=E... [more]
A0A835YRX4_9STRA9.110e-4852.28Coatomer WD associated region-domain-containing pr... [more]
A0A6H5K868_9PHAE1.420e-4156.91Coatomer_WDAD domain-containing protein n=1 Tax=Ec... [more]
A0A7S2XXQ5_9STRA2.920e-3743.15Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2G0J9_9STRA3.650e-3540.61Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S2EB92_TRICV3.840e-3542.05Coatomer subunit beta' n=1 Tax=Trieres chinensis T... [more]
A0A2C9KDB7_BIOGL5.920e-3542.33Coatomer_WDAD domain-containing protein n=1 Tax=Bi... [more]
A0A1S3J2M3_LINUN2.630e-3441.27Coatomer subunit beta' n=2 Tax=Lingula unguis TaxI... [more]
A0A8J1TRJ5_OWEFU3.600e-3442.33Coatomer subunit beta' n=2 Tax=Owenia fusiformis T... [more]
V4BQF1_LOTGI4.900e-3440.21Coatomer subunit beta' n=1 Tax=Lottia gigantea Tax... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.25.40.470coord: 46..144
e-value: 6.1E-32
score: 112.8
coord: 2..45
e-value: 2.4E-10
score: 42.2
NoneNo IPR availablePANTHERPTHR19876COATOMERcoord: 47..137
NoneNo IPR availablePANTHERPTHR19876:SF28coord: 47..137
IPR006692Coatomer, WD associated regionPFAMPF04053Coatomer_WDADcoord: 46..115
e-value: 4.0E-18
score: 65.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12921contigE-fasciculatus_F_contig12921:630..3791 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12921.2213.1mRNA_E-fasciculatus_F_contig12921.2213.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12921 630..3791 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12921.2213.1 ID=prot_E-fasciculatus_F_contig12921.2213.1|Name=mRNA_E-fasciculatus_F_contig12921.2213.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=148bp
MFAAIQTAVVRKDFETANSILPSIPKGEYTAVARFLESQGFKDEAFQDLG
GLLLLHSSTGNREGMLALAEDARKAGRTNVAFLSLFVCGKVEECLELLVS
AGRVPEAAFMARTYLPSAMGRLVELWKKDLATVSAKVRWTAVVFVIVV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006692Coatomer_WD-assoc_reg