prot_E-fasciculatus_F_contig1292.2210.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-fasciculatus_F_contig1292.2210.1
Unique Name	prot_E-fasciculatus_F_contig1292.2210.1
Type	polypeptide
Organism	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length	377

Homology

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BLAST of mRNA_E-fasciculatus_F_contig1292.2210.1 vs. uniprot
Match: D7G4A9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4A9_ECTSI)

HSP 1 Score: 82.0 bits (201), Expect = 5.590e-15
Identity = 39/54 (72.22%), Postives = 42/54 (77.78%), Query Frame = 0

Query:    1 LWTANRDGR-HRHSGKGAGAPGVPGVLVNRLTLDDCFNPSVTDLRWPERLREIA 53
            LWTA+RD R  R S K AG PGVP VLV +LTL DCFNP VT +RWPERLREIA
Sbjct:   35 LWTASRDARGQRRSRKAAGVPGVPPVLVRQLTLSDCFNPKVTGMRWPERLREIA 88

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BLAST of mRNA_E-fasciculatus_F_contig1292.2210.1 vs. uniprot
Match: A0A6H5L639_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L639_9PHAE)

HSP 1 Score: 80.1 bits (196), Expect = 1.070e-12
Identity = 38/56 (67.86%), Postives = 44/56 (78.57%), Query Frame = 0

Query:    1 LWTANRDGRHR-HSGKGAGAPGVPGVLVNRLTLDDCFNPSVTDLRWPERLREIAFG 55
            LWTA+RD R +  S K AG PGVP VLV +L L DCFNP++T +RWPERLREIAFG
Sbjct:  150 LWTASRDARGQGRSRKVAGVPGVPPVLVRQLKLSDCFNPTLTGIRWPERLREIAFG 205

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BLAST of mRNA_E-fasciculatus_F_contig1292.2210.1 vs. uniprot
Match: D7G452_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G452_ECTSI)

HSP 1 Score: 75.9 bits (185), Expect = 1.750e-11
Identity = 37/55 (67.27%), Postives = 41/55 (74.55%), Query Frame = 0

Query:    1 LWTANRDGR-HRHSGKGAGAPGVPGVLVNRLTLDDCFNPSVTDLRWPERLREIAF 54
            L T +RD R  R S K AG PGVP V V +LTL DCFNP+VT +RWPERLREIAF
Sbjct:   17 LRTCSRDARGQRSSRKAAGVPGVPPVFVRQLTLSDCFNPTVTGMRWPERLREIAF 71

The following BLAST results are available for this feature:

BLAST of mRNA_E-fasciculatus_F_contig1292.2210.1 vs. uniprot

BLAST of mRNA_E-fasciculatus_F_contig1292.2210.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D7G4A9_ECTSI	5.590e-15	72.22	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5L639_9PHAE	1.070e-12	67.86	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G452_ECTSI	1.750e-11	67.27	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008615	FNIP	PFAM	PF05725	FNIP	coord: 80..121 e-value: 1.0E-4 score: 22.4 coord: 190..232 e-value: 2.7E-4 score: 21.0 coord: 278..320 e-value: 2.9E-5 score: 24.1
None	No IPR available	PANTHER	PTHR32134	UNCHARACTERIZED	coord: 25..171
None	No IPR available	PANTHER	PTHR32134:SF135	FNIP REPEAT-CONTAINING PROTEIN	coord: 180..356 coord: 66..280
None	No IPR available	PANTHER	PTHR32134:SF135	FNIP REPEAT-CONTAINING PROTEIN	coord: 25..171
None	No IPR available	PANTHER	PTHR32134	UNCHARACTERIZED	coord: 180..356
None	No IPR available	PANTHER	PTHR32134	UNCHARACTERIZED	coord: 66..280
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 179..342

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-fasciculatus_F_contig1292	contig	E-fasciculatus_F_contig1292:1491..2907 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-fasciculatus_F_contig1292.2210.1	mRNA_E-fasciculatus_F_contig1292.2210.1	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	mRNA	E-fasciculatus_F_contig1292 1491..2907 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-fasciculatus_F_contig1292.2210.1 ID=prot_E-fasciculatus_F_contig1292.2210.1|Name=mRNA_E-fasciculatus_F_contig1292.2210.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=377bp
LWTANRDGRHRHSGKGAGAPGVPGVLVNRLTLDDCFNPSVTDLRWPERLR
EIAFGKQFDRSLCGVQWPRMLASVRFGCSFDQPLGRVEFPDGLESLAFGC
GFNQPLAGVKLPRGLRSLWLGEAFDQPLDGVEFPDGLQTLSLGGVFDQPL
CGVKWPGGLERLALGREFNQPLGDVYWPQGVRQIAFSQQFDHPIESMAFP
SSVQWIEFGSNFNQDVGGVKWPADLEYLKFSCRFNKTLEHTKLPRGLAVL
KLCCMWDHSLARVDLPESLKLLRLSDGFDRPLDEVRFPPGLASLYLGDTF
DQPLNEVKWPANLKTLYLGDLFDYPLDNVEWPEGLESLFLGQSFSEDLDS
MDLPASMTIRIVGDSSEDCDVVEWPF*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR008615	FNIP