mRNA_E-fasciculatus_F_contig12919.2209.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12919.2209.1 vs. uniprot
Match: D7FL48_ECTSI (Leucine rich repeat carbohydrate binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL48_ECTSI) HSP 1 Score: 294 bits (753), Expect = 6.100e-95 Identity = 153/165 (92.73%), Postives = 156/165 (94.55%), Query Frame = 1
Query: 1 MTLSRSWAALAAAVA-GACVVADGAIVDAGTLTSVTTEAPVFDDRATLPYGCPPAGCVGANTRDGITSDESRWSCAPSLDSTDAGCTITYTLEDEQHLEALKIALYQGDTRTRTIDISVDGSYVLSWTSSGTTSDFESIDLGVDGKVVELVGDLQDSEWLSILEV 492
M LSRSWAA AAAVA GACVV D AIVDAGTLT VTTEAPVFDDRATLPYGCPPAGCVGANTRDGITSDESRWSCAPSLDS+D+GCTITYTLEDEQHLEALKIALYQGDTRTRTIDISVDG+Y SWTSSGTTSDFESIDLGVDGKVVELVGDLQD EWLSILEV
Sbjct: 1 MALSRSWAAFAAAVAAGACVV-DAAIVDAGTLTGVTTEAPVFDDRATLPYGCPPAGCVGANTRDGITSDESRWSCAPSLDSSDSGCTITYTLEDEQHLEALKIALYQGDTRTRTIDISVDGNYAFSWTSSGTTSDFESIDLGVDGKVVELVGDLQDWEWLSILEV 164
BLAST of mRNA_E-fasciculatus_F_contig12919.2209.1 vs. uniprot
Match: A0A6H5L1V3_9PHAE (F5/8 type C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L1V3_9PHAE) HSP 1 Score: 201 bits (512), Expect = 5.120e-59 Identity = 105/160 (65.62%), Postives = 126/160 (78.75%), Query Frame = 1
Query: 13 RSWAALAAAVAGACVVADGAIVDAGTLTSVTTEAPVFDDRATLPYGCPPAGCVGANTRDGITSDESRWSCAPSLDSTDAGCTITYTLEDEQHLEALKIALYQGDTRTRTIDISVDGSYVLSWTSSGTTSDFESIDLGVDGKVVELVGDLQDSEWLSILEV 492
RSWA LAAAVA + V +AGT+ SVT EA VFD R+TLPYGCPP GCV ANTRDG SDESRWSC PSLD++ +GC+IT+TLE ++L ++IALY+GDTRTRTID+ VDG ++ +WTSSGTT+ FES+ L G+VVELVGDL D EWLSILEV
Sbjct: 6 RSWATLAAAVASSRTVYGN--YEAGTVMSVTPEASVFDTRSTLPYGCPPDGCVAANTRDGDMSDESRWSCRPSLDASGSGCSITFTLEKVEYLGDIRIALYKGDTRTRTIDMYVDGRHITTWTSSGTTTGFESVLLMDQGQVVELVGDLNDDEWLSILEV 163
BLAST of mRNA_E-fasciculatus_F_contig12919.2209.1 vs. uniprot
Match: A0A6H5KL74_9PHAE (F5/8 type C domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KL74_9PHAE) HSP 1 Score: 145 bits (365), Expect = 3.910e-37 Identity = 81/159 (50.94%), Postives = 106/159 (66.67%), Query Frame = 1
Query: 22 AALAAAVAGACVVADGAIVDAGTLTSVTTEAPVFDDRATLPYG-CPPAGCVGANTRDG-ITSDESRWSCAPSLDSTDAGCTITYTLEDEQHLEALKIALYQGDTRTRTIDISVDGSYVLSWTSSGTTSDFESIDLGVDGKVVELVGDLQDSEWLSILEV 492
A L AA AG A A+V+A TL +VT AP++D T G C P GC+G NTRDG TS ESRWSC P+L + C ITY L + L L IA+Y+GD RTRT++I++D WTSSGTT+DFE+I++ G+ +++VG L+DSEWLSI+EV
Sbjct: 8 AGLLAAGAGPSSSALAAVVEASTLATVTVAAPLYDTTVTASDGGCSPTGCIGDNTRDGDATSVESRWSCKPALGDAGSVCRITYGLGIQYQLTGLNIAMYKGDERTRTLEINIDNLPYTVWTSSGTTTDFETIEVDTMGRWIDIVGVLEDSEWLSIMEV 166
BLAST of mRNA_E-fasciculatus_F_contig12919.2209.1 vs. uniprot
Match: D7FZZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZZ4_ECTSI) HSP 1 Score: 142 bits (358), Expect = 3.340e-36 Identity = 76/134 (56.72%), Postives = 89/134 (66.42%), Query Frame = 1
Query: 94 TSVTTEAPVFDDRATLPYGCPPAGCVGANTRDGITSDESRWSCAPSLDSTDAGCTITYTLEDEQHLEALKIALYQGDTRTRTIDISVDGSYVLSWTSSGTTSDFESIDL--GVDGKVVELVGDLQDSEWLSILE 489
T+VTT A +FD + GC PAGC A TRDG T D SRWSCA +L A C+I+Y L E L+ L++ALY GD R RTID+SVDG V +WTSSGTT FESI GV G V+ L G L DSEWLSI+E
Sbjct: 249 TTVTTTADLFDPALAIDNGCDPAGCTAALTRDGDTGDASRWSCATNLGGEGAVCSISYDLGREFGLDELRVALYNGDIRVRTIDVSVDGVLVATWTSSGTTDGFESIAFPDGVSGTVINLQGVLDDSEWLSIIE 382
BLAST of mRNA_E-fasciculatus_F_contig12919.2209.1 vs. uniprot
Match: D7FTH1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTH1_ECTSI) HSP 1 Score: 142 bits (357), Expect = 4.660e-36 Identity = 74/145 (51.03%), Postives = 99/145 (68.28%), Query Frame = 1
Query: 61 ADGAIVDAGTLTSVTTEAPVFDDRATLPYGCPPAGCVGANTRDG-ITSDESRWSCAPSLDSTDAGCTITYTLEDEQHLEALKIALYQGDTRTRTIDISVDGSYVLSWTSSGTTSDFESIDLGVDGKVVELVGDLQDSEWLSILEV 492
AD AIV+A TL +VT A ++D + GC P+GCV TRDG +TS ESRWSC P+L + C ITY L + L A+ IA+Y+GD RTRT+DIS+D +WTSSGTT+ +E+I+L + + +VG L+DSEWLSI+EV
Sbjct: 21 ADAAIVEASTLATVTAVADLYDPSLSAENGCDPSGCVAELTRDGDVTSLESRWSCQPALGDAGSECRITYGLGIQYQLSAVNIAMYKGDERTRTLDISIDNLPYTTWTSSGTTTGYETIELDTMAQWISVVGVLEDSEWLSIMEV 165
BLAST of mRNA_E-fasciculatus_F_contig12919.2209.1 vs. uniprot
Match: A0A6H5KFA6_9PHAE (F5/8 type C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFA6_9PHAE) HSP 1 Score: 142 bits (357), Expect = 4.660e-36 Identity = 74/145 (51.03%), Postives = 99/145 (68.28%), Query Frame = 1
Query: 61 ADGAIVDAGTLTSVTTEAPVFDDRATLPYGCPPAGCVGANTRDG-ITSDESRWSCAPSLDSTDAGCTITYTLEDEQHLEALKIALYQGDTRTRTIDISVDGSYVLSWTSSGTTSDFESIDLGVDGKVVELVGDLQDSEWLSILEV 492
AD AIV+A TL +VT A ++D R + GC P+GCV TRDG TS ESRWSC P+L + C ITY L + L L IA+++GD RTRT++I++D WTSSGTT+ FE+I++ G+ +E+VG L+DSEWLSI+EV
Sbjct: 20 ADAAIVEASTLATVTAVADLYDPRLSADNGCDPSGCVAELTRDGDATSLESRWSCQPALGDAGSVCRITYGLGIQYQLTGLNIAMFKGDERTRTLEINIDNLPYTVWTSSGTTAGFETIEVDTTGRWIEIVGVLEDSEWLSIMEV 164
BLAST of mRNA_E-fasciculatus_F_contig12919.2209.1 vs. uniprot
Match: A0A6H5KH45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH45_9PHAE) HSP 1 Score: 140 bits (354), Expect = 1.160e-35 Identity = 74/145 (51.03%), Postives = 98/145 (67.59%), Query Frame = 1
Query: 61 ADGAIVDAGTLTSVTTEAPVFDDRATLPYGCPPAGCVGANTRDG-ITSDESRWSCAPSLDSTDAGCTITYTLEDEQHLEALKIALYQGDTRTRTIDISVDGSYVLSWTSSGTTSDFESIDLGVDGKVVELVGDLQDSEWLSILEV 492
AD A V+A TL +VT A ++D R + GC P+GCV TRDG TS ESRW+C P+L + C ITY L + L +L IA+Y+GD RTRT++IS+D +WTSSGTT+ FE+I+L G+ + +VG L DSEWLSI+EV
Sbjct: 3 ADAASVEASTLANVTAVAELYDPRLSAESGCDPSGCVAELTRDGDATSLESRWACKPALGDAGSECRITYGLGIQYQLSSLNIAMYKGDERTRTLEISIDNLPYTTWTSSGTTTGFETIELDTMGRWISIVGVLADSEWLSIMEV 147
BLAST of mRNA_E-fasciculatus_F_contig12919.2209.1 vs. uniprot
Match: D7G277_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G277_ECTSI) HSP 1 Score: 93.2 bits (230), Expect = 5.040e-19 Identity = 62/151 (41.06%), Postives = 84/151 (55.63%), Query Frame = 1
Query: 76 VDAGTLTSVTTEAPVFDDRATLPYGCPPAGCVGANTRDGITSDESRWSCAPSLDSTDAG-----CTITYTLEDEQHLEALKIALYQGDTRTRTIDISVDGSYVLSWTSSGTTSDFESIDL-------GVDGKVVELVGDLQDSEWLSILEV 492
V+AG +T+VT FD R T GC P GC G NTRDG +D SRWSC+ L G C + + L + Q + ++ +A +GDTRTRT++I+V+G TS GTTS E+ +L GV +E G L E+LSI+EV
Sbjct: 248 VEAGEVTTVTVTTNAFDAR-TDDDGCAPDGCTGENTRDGDLTDNSRWSCSAGLVEAAGGAAGEECQVMFELGEAQLVTSVSVAFLKGDTRTRTLNINVNGELFEVVTSGGTTSGLETFELDGGAGAPGVLSLGMESSG-LTADEFLSIIEV 396
BLAST of mRNA_E-fasciculatus_F_contig12919.2209.1 vs. uniprot
Match: D7FI81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI81_ECTSI) HSP 1 Score: 72.4 bits (176), Expect = 4.570e-12 Identity = 50/147 (34.01%), Postives = 74/147 (50.34%), Query Frame = 1
Query: 79 DAGTLTSVTTEAPVFDDR---ATLPYGCPPAG---CVGANTRDGITSD-ESRWSCAPSLDSTDAGCTITYTLEDEQHLEALKIALYQGDTRTRTIDISVDGSYVLSWTSSGTTSDFESIDL-GVDGKVVELVG-DLQDSEWLSILEV 492
+ GT+T V A D R ++ GC G C DGI S+ ESRWSCA L + C I ++ D Q + +++A ++G+ RTRT+DI +DG + S S F ++ + + V L DL EW+S+LEV
Sbjct: 158 EVGTMTEVNVSATAHDTRPGSSSGDVGCGETGGDGCAAIKAHDGIISEIESRWSCATMLVPDEGPCQIEFSFADPQDIVDIQVAFWEGNERTRTVDIFIDGELTHTH-ESYADSTFNTLGVTATEASTVMLESVDLLSDEWISLLEV 303
BLAST of mRNA_E-fasciculatus_F_contig12919.2209.1 vs. uniprot
Match: UPI001950E9C6 (polysaccharide lyase family 7 protein n=1 Tax=Archangium violaceum TaxID=83451 RepID=UPI001950E9C6) HSP 1 Score: 53.1 bits (126), Expect = 3.980e-5 Identity = 37/91 (40.66%), Postives = 49/91 (53.85%), Query Frame = 1
Query: 250 GCTITYTLEDEQHLEALKIALYQGDTRTRTIDISVDGSYVLSWT-------SSGTTSDFESIDLG-VDGKVVELVGDLQDSE--WLSILEV 492
G IT+ L Q ++ +KIA YQG+TRT T D+ S WT SSGTT+DFE+ D+ + + V +VG S W SI EV
Sbjct: 192 GAYITFDLGTTQGVQLVKIAWYQGNTRTTTFDVLAGTSTSGPWTTLINRGVSSGTTTDFETYDVADTNARYVRIVGHGNSSGNGWNSIAEV 282 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12919.2209.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12919.2209.1 >prot_E-fasciculatus_F_contig12919.2209.1 ID=prot_E-fasciculatus_F_contig12919.2209.1|Name=mRNA_E-fasciculatus_F_contig12919.2209.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=164bp MTLSRSWAALAAAVAGACVVADGAIVDAGTLTSVTTEAPVFDDRATLPYGback to top mRNA from alignment at E-fasciculatus_F_contig12919:241..1939- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12919.2209.1 ID=mRNA_E-fasciculatus_F_contig12919.2209.1|Name=mRNA_E-fasciculatus_F_contig12919.2209.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1699bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12919:241..1939- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12919:241..1939- >mRNA_E-fasciculatus_F_contig12919.2209.1 ID=mRNA_E-fasciculatus_F_contig12919.2209.1|Name=mRNA_E-fasciculatus_F_contig12919.2209.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=984bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12919:241..1939- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |