mRNA_E-fasciculatus_F_contig12902.2197.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig12902.2197.1
Unique NamemRNA_E-fasciculatus_F_contig12902.2197.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig12902.2197.1 vs. uniprot
Match: D7FUF8_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF8_ECTSI)

HSP 1 Score: 518 bits (1333), Expect = 6.980e-180
Identity = 292/301 (97.01%), Postives = 296/301 (98.34%), Query Frame = 1
Query:    1 DQKAVAATTIVWKDTVTLGTEDAPKRTAALYAADAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYTPAPVRVYGQFAVEAGTYTFAWQGDDGKTVEKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPIAPAELKPVEPEADMDTIAQAVSEVSVADKPPAXXXXXXXXXXXXXXXXXXXXXXXXXXEASGDSAKPSDGQTFKPDTHAVDVTVALGQHGLGLVLGKEEEGSRWAVKGFRDMPDGQPNPASAGGIEVGDTLQKLDGVTLGSYKDGMEMFKKQSGSVVITVLRQDEITI 903
            DQKAVAATTIVWKDTVTLGT+DAPK+TAALYAADAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYTPAPVRVYGQFAVEAGTYTFAWQGDDGKTVEKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPIAPAELKPVEPE DMDTI QAVSEVSVADKP  XXXXXXXXXXXXXXXXXXXXXXXXXXEASGDSAKPS+GQTFKPDTHAVDVTV+LGQHGLGLVLGKEE GSRWAVKGFRDMPDGQPNPASAGGIEVGDTLQKLDGVTLGSYKDGMEMFKKQSGSVVITVLRQDEITI
Sbjct:  287 DQKAVAATTIVWKDTVTLGTDDAPKKTAALYAADAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYTPAPVRVYGQFAVEAGTYTFAWQGDDGKTVEKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPIAPAELKPVEPEVDMDTIVQAVSEVSVADKP--XXXXXXXXXXXXXXXXXXXXXXXXXXEASGDSAKPSEGQTFKPDTHAVDVTVSLGQHGLGLVLGKEEAGSRWAVKGFRDMPDGQPNPASAGGIEVGDTLQKLDGVTLGSYKDGMEMFKKQSGSVVITVLRQDEITI 585          
BLAST of mRNA_E-fasciculatus_F_contig12902.2197.1 vs. uniprot
Match: A0A6H5K0Z5_9PHAE (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0Z5_9PHAE)

HSP 1 Score: 385 bits (989), Expect = 1.330e-127
Identity = 206/308 (66.88%), Postives = 231/308 (75.00%), Query Frame = 1
Query:    1 DQKAVAATTIVWKDTVTLGTEDAPKRTAALYAADAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYTPAPVRVYGQFAVEAGTYTFAWQGDDGKTVEKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPIAPAELKPVEPEAD-MDTIAQAVSEVSVADKPPAXXXXXXXXXXXXXXXXXXXXXXXXXXEASGDSAKPSDGQTFKPDT-----HAVDVTVALGQHGLGLVLGKEEEGSRWAVKGFRDMPDGQPNPASAGGIEVGDTLQKLDGVTLGSYKDGMEMFKKQSGSVVITVLRQ-DEITI 903
            DQKAVA TTIVWKDTVTLGT+DAPK+TAALYA DAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRL+EYTPAPVRVYG+FAV+AGTYTFAW+GDDG TVEKRARFSFTFRR KPGSP+PWTIVEHHSSSMP APAELK VEPE D +D +AQAV+++S      +                               S  P  GQ     T     H+VDVT  +G  GLGLVLGKEE+G+RW V GFR MPDG+PNPA A GIEVGDTLQ++ GV LG+YK+G+E+FKK  G VV+TV RQ DEI I
Sbjct:  322 DQKAVAETTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLLEYTPAPVRVYGEFAVQAGTYTFAWEGDDGDTVEKRARFSFTFRRGKPGSPRPWTIVEHHSSSMPDAPAELKHVEPEDDGIDYVAQAVADLSATSSVSSSTLPP--------------------------SPPPRKGQAMAAFTEDVNHHSVDVTANVGSCGLGLVLGKEEQGTRWVVNGFRSMPDGKPNPAEAAGIEVGDTLQRVGGVPLGTYKEGIELFKKLRGPVVLTVCRQNDEILI 603          
BLAST of mRNA_E-fasciculatus_F_contig12902.2197.1 vs. uniprot
Match: D7FN21_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN21_ECTSI)

HSP 1 Score: 373 bits (958), Expect = 5.370e-123
Identity = 207/307 (67.43%), Postives = 237/307 (77.20%), Query Frame = 1
Query:    1 DQKAVAATTIVWKDTVTLGTEDAPKRTAALYAADAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYTPAPVRVYGQFAVEAGTYTFAWQGDDGKTVEKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPIAPAELKPVE--PEADMD-TIAQAVSEVSVADKPPAXXXXXXXXXXXXXXXXXXXXXXXXXXEASG---DSAKPSDGQTFKPDTHAVDVTVALGQHGLGLVLGKEEEGSRWAVKGFRDMPDGQPNPASAGGIEVGDTLQKLDGVTLGSYKDGMEMFKKQSGSVVITVLRQDEITI 903
            + KA + TTIVWKDTVTLGTEDAPK+T+ALY  DAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEY+PAP RVYGQFAV+AGTYTFAWQG+D +TVEKRARFSFTFRRD P SP PWTIVEHHSSSMP APA LK VE  P A MD  + +    V  A++P  XXXXXX        XXXXX       E +    D +   D + F P TH VDVT+ +G +GLG++LG+E+EG+RW VKGFR+MPDG   PA   G+EVGDTLQKL+GV LGSYK+GM MFKKQ+GS  +T+LRQDEITI
Sbjct:  292 EMKAGSETTIVWKDTVTLGTEDAPKKTSALYPEDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYSPAPARVYGQFAVQAGTYTFAWQGNDDETVEKRARFSFTFRRDHPESPTPWTIVEHHSSSMPSAPAGLKRVENDPAAVMDEVVVEDAPAVVAAEEPXXXXXXXXAEAEPDVVXXXXXAAEEPASEEAEEVPDFSVVPDEEPFVPPTHPVDVTITVGSNGLGVILGEEKEGTRWTVKGFRNMPDGDKGPAEVAGVEVGDTLQKLEGVILGSYKEGMAMFKKQTGSFSLTILRQDEITI 598          
BLAST of mRNA_E-fasciculatus_F_contig12902.2197.1 vs. uniprot
Match: A0A6H5LB09_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB09_9PHAE)

HSP 1 Score: 384 bits (987), Expect = 6.530e-119
Identity = 227/314 (72.29%), Postives = 246/314 (78.34%), Query Frame = 1
Query:    1 DQKAVAATTIVWKDTVTLGTEDAPKRTAALYAADAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYTPAPVRVYGQFAVEAGTYTFAWQGDDGKTVEKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPIAPAELKPVE--PEADMDTI----AQAVSEVS-------VADKPPAXXXXXXXXXXXXXXXXXXXXXXXXXXEASGDSAKPSDGQTFKPDTHAVDVTVALGQHGLGLVLGKEEEGSRWAVKGFRDMPDGQPNPASAGGIEVGDTLQKLDGVTLGSYKDGMEMFKKQSGSVVITVLRQDEITI 903
            D KAV+ TTIVWK+TVTLGTEDAPK+TAALYA DAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYTPAP RVYGQFAV+AGTYTFAWQG+DG+TVEKRARFSFTFRRD P SP PWTIVEHHSSSMP AP  LK VE  P A MD +    A AV           VAD+P A       XXXXXXXXXXXXXXXX   E    S  P D + F P TH VDVTV +G HGLGLVLG+E+EG+RW VKGFR+MPDG   PA   G+EVGDTLQKL+GV LGSYK+GM MFKKQ+GS  +TVLRQDEITI
Sbjct: 1417 DMKAVSETTIVWKNTVTLGTEDAPKKTAALYAEDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYTPAPARVYGQFAVQAGTYTFAWQGNDGETVEKRARFSFTFRRDHPESPTPWTIVEHHSSSMPSAPDGLKRVENDPAAVMDDVVVEEAPAVVAAEEPEEPAVVADEPAAEAEPDVVXXXXXXXXXXXXXXXX---EVPDFSVVP-DEEPFVPTTHPVDVTVTVGSHGLGLVLGEEKEGTRWTVKGFRNMPDGDKGPAEVAGVEVGDTLQKLEGVVLGSYKEGMAMFKKQTGSFSLTVLRQDEITI 1726          
BLAST of mRNA_E-fasciculatus_F_contig12902.2197.1 vs. uniprot
Match: A0A6H5JT29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT29_9PHAE)

HSP 1 Score: 277 bits (708), Expect = 3.540e-87
Identity = 134/141 (95.04%), Postives = 139/141 (98.58%), Query Frame = 1
Query:    1 DQKAVAATTIVWKDTVTLGTEDAPKRTAALYAADAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYTPAPVRVYGQFAVEAGTYTFAWQGDDGKTVEKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPIAPAELKPV 423
            DQKAVAATTIVWKDTVTLGT+DAPK+TAALYA DAVLWGTVSEEVRETPEQIYDYFDFFARLPKLR+VEYTPAPVRVYG+FAVEAGTYTFAWQG+DGKTVEKRARFSFTFRR KPGSPQPWTIVEHHSSSMPIAPAELKPV
Sbjct:  293 DQKAVAATTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRVVEYTPAPVRVYGEFAVEAGTYTFAWQGEDGKTVEKRARFSFTFRRGKPGSPQPWTIVEHHSSSMPIAPAELKPV 433          
BLAST of mRNA_E-fasciculatus_F_contig12902.2197.1 vs. uniprot
Match: A0A6H5JTS4_9PHAE (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JTS4_9PHAE)

HSP 1 Score: 260 bits (665), Expect = 2.020e-78
Identity = 197/465 (42.37%), Postives = 233/465 (50.11%), Query Frame = 1
Query:    1 DQKAVAATTIVWKDTVTLGTEDAPKRTAALYAADAVLWGT------------VSEEVRETPEQIYDYFDFFARLPKLRLVEYTPAPVRVYGQFAVEAGTYTFAWQGDDGKTVEKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPIAPAELK---------------------------------------------------------------------------------PV----------------------------EPEADMDTIAQAVSEVSVADKP------------PAXXXXXXXXXXXXXXXXXXXXXXXXXXEASGDSAKPSDGQT-----------FKPDTHAV------------------------DVTVALGQHGLGLVLGKEEEGSRWAVKGFRDMPDGQPNPASAGGIEVGDTLQKLDGVTLGSYKDGMEMFKKQSGSVVITVLRQD 891
            + ++V+ TT+ W +TVT GT DAPKRTA LYA DA+LWGT            VSE VR+TPEQIY YFD+FARLP+L++VEYTPAPVRVYG FA +AG+YTF+WQG DG TVE RARFSFTFRR  P SPQPWTIVEHHSSSMP +P EL+                                                                                 P+                             PEA   T  +   +   A++              A    XXXXXXXXXXXXXXXXXXXXX E  G  A  S  QT            +  + AV                        D+T  +G  GLGL+LG+E+EG+RW VKGFR MPDG+PNPA A GIEVGDTLQKL GV LGSYKDG+E+FKKQ G VV+T+ RQ+
Sbjct:  208 ETRSVSETTLAWTETVTRGTYDAPKRTAELYAPDAILWGTEVCGXXXXXXXTVSETVRDTPEQIYAYFDYFARLPELKVVEYTPAPVRVYGDFAAQAGSYTFSWQGTDGSTVEMRARFSFTFRRAGPSSPQPWTIVEHHSSSMPTSPLELELNRVGLNTNLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKASRSPIWSGLFRAFTSSAASAASSDQPAAASVASAPEAKTMTAEEEAEDARAAEQARAEIXXXXXXXXXARERSXXXXXXXXXXXXXXXXXXXXXAETKGGRASSSGLQTPPAPESEHHEEVRASSSAVSSSAVARELSFDGTGAGKDKAKIHDITATVGPLGLGLMLGEEKEGTRWVVKGFRVMPDGKPNPAEAAGIEVGDTLQKLGGVPLGSYKDGIEIFKKQRGPVVLTISRQN 672          
BLAST of mRNA_E-fasciculatus_F_contig12902.2197.1 vs. uniprot
Match: A0A6H5JX02_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX02_9PHAE)

HSP 1 Score: 229 bits (583), Expect = 5.920e-68
Identity = 111/140 (79.29%), Postives = 121/140 (86.43%), Query Frame = 1
Query:    1 DQKAVAATTIVWKDTVTLGTEDAPKRTAALYAADAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYTPAPVRVYGQFAVEAGTYTFAWQGDDGKTVEKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPIAPAELKP 420
            DQKAVAAT +VWKDTVT+GT+D P++TA LYA DA LWGTVSEEVR+TPEQIY YFD+FARLP LRLVEYTP  VRVYG FAV+AGTYTF+WQ +DG TVEKRARFSFTFRRD P  PQ W IVEHHSSSMP APA LKP
Sbjct:  186 DQKAVAATAVVWKDTVTMGTDDTPRKTADLYAQDATLWGTVSEEVRDTPEQIYAYFDYFARLPALRLVEYTPVAVRVYGDFAVQAGTYTFSWQDNDGTTVEKRARFSFTFRRD-PSKPQQWAIVEHHSSSMPTAPAGLKP 324          
BLAST of mRNA_E-fasciculatus_F_contig12902.2197.1 vs. uniprot
Match: D7FUF9_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF9_ECTSI)

HSP 1 Score: 230 bits (586), Expect = 4.910e-67
Identity = 109/141 (77.30%), Postives = 123/141 (87.23%), Query Frame = 1
Query:    1 DQKAVAATTIVWKDTVTLGTEDAPKRTAALYAADAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYTPAPVRVYGQFAVEAGTYTFAWQGDDGKTVEKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPIAPAELKPV 423
            D++AVA TT++WKDTVT GT DAPK+TAALYA D  LWGTVSEEVR+TP+QIY YFD+FARLP+LR+VEYTP  VRVYG FAV+AGTYTF+WQ DDG  VEKRARFSFTFRRD PG+ +PWTIVEHHSSSMP APA LK V
Sbjct:  172 DRRAVAETTVLWKDTVTSGTYDAPKKTAALYAPDGTLWGTVSEEVRDTPQQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFSWQADDGAIVEKRARFSFTFRRDNPGTERPWTIVEHHSSSMPTAPAGLKAV 312          
BLAST of mRNA_E-fasciculatus_F_contig12902.2197.1 vs. uniprot
Match: A0A6H5JSB2_9PHAE (DUF4440 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JSB2_9PHAE)

HSP 1 Score: 208 bits (529), Expect = 5.490e-63
Identity = 102/141 (72.34%), Postives = 114/141 (80.85%), Query Frame = 1
Query:    1 DQKAVAATTIVWKDTVTLGTEDAPKRTAALYAADAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYTPAPVRVYGQFAVEAGTYTFAWQGDDGKTVEKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPIAPAELKPV 423
            D+K V  TTI WK+ VTLGT DAP++TA LYA D VLWGTVSEEVR+TPE+IYDYFD+FARLP LRL E+TP  +RVYG FA EAGTYTF WQG+DG   EKRARFSFTFR D P SP  WTIVEHHSSSMP +P +LK V
Sbjct:  103 DRKGVEQTTIRWKEMVTLGTPDAPRKTADLYAVDGVLWGTVSEEVRDTPEEIYDYFDYFARLPNLRLSEFTPVSLRVYGDFATEAGTYTFKWQGEDGVPKEKRARFSFTFRSD-PESPTSWTIVEHHSSSMPTSPLQLKHV 242          
BLAST of mRNA_E-fasciculatus_F_contig12902.2197.1 vs. uniprot
Match: A0A6H5JTG7_9PHAE (PDZ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTG7_9PHAE)

HSP 1 Score: 195 bits (496), Expect = 5.660e-60
Identity = 96/98 (97.96%), Postives = 96/98 (97.96%), Query Frame = 1
Query:  610 QTFKPDTHAVDVTVALGQHGLGLVLGKEEEGSRWAVKGFRDMPDGQPNPASAGGIEVGDTLQKLDGVTLGSYKDGMEMFKKQSGSVVITVLRQDEITI 903
            QTFKPDTHAVDVTVALGQHGLGLVLGKEE GSRW VKGFRDMPDGQPNPASAGGIEVGDTLQKLDGVTLGSYKDGMEMFKKQSGSVVITVLRQDEITI
Sbjct:    5 QTFKPDTHAVDVTVALGQHGLGLVLGKEEAGSRWVVKGFRDMPDGQPNPASAGGIEVGDTLQKLDGVTLGSYKDGMEMFKKQSGSVVITVLRQDEITI 102          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12902.2197.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUF8_ECTSI6.980e-18097.01Similar to Uncharacterized protein conserved in ba... [more]
A0A6H5K0Z5_9PHAE1.330e-12766.88PDZ domain-containing protein n=2 Tax=Ectocarpus T... [more]
D7FN21_ECTSI5.370e-12367.43Similar to Uncharacterized protein conserved in ba... [more]
A0A6H5LB09_9PHAE6.530e-11972.29Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JT29_9PHAE3.540e-8795.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTS4_9PHAE2.020e-7842.37PDZ domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A6H5JX02_9PHAE5.920e-6879.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUF9_ECTSI4.910e-6777.30Similar to Uncharacterized protein conserved in ba... [more]
A0A6H5JSB2_9PHAE5.490e-6372.34DUF4440 domain-containing protein n=2 Tax=Ectocarp... [more]
A0A6H5JTG7_9PHAE5.660e-6097.96PDZ domain-containing protein n=1 Tax=Ectocarpus s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12902contigE-fasciculatus_F_contig12902:502..3619 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score519.2
Seed ortholog evalue1.3e-144
Seed eggNOG ortholog2880.D7FUF8
EggNOG free text desc.SnoaL-like domain
EggNOG OGs2S0Y2@2759,COG4875@1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionDomain of unknown function DUF4440
Ec32 orthologEc-03_000330.1
Exons6
Model size906
Cds size906
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12902.2197.1prot_E-fasciculatus_F_contig12902.2197.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig12902 502..3619 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927794.3196957-CDS-E-fasciculatus_F_contig12902:501..6451622927794.3196957-CDS-E-fasciculatus_F_contig12902:501..645Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12902 502..645 -
1695995697.7731264-CDS-E-fasciculatus_F_contig12902:501..6451695995697.7731264-CDS-E-fasciculatus_F_contig12902:501..645Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12902 502..645 -
1622927794.3359752-CDS-E-fasciculatus_F_contig12902:998..11481622927794.3359752-CDS-E-fasciculatus_F_contig12902:998..1148Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12902 999..1148 -
1695995697.7854257-CDS-E-fasciculatus_F_contig12902:998..11481695995697.7854257-CDS-E-fasciculatus_F_contig12902:998..1148Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12902 999..1148 -
1622927794.3508048-CDS-E-fasciculatus_F_contig12902:1965..20521622927794.3508048-CDS-E-fasciculatus_F_contig12902:1965..2052Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12902 1966..2052 -
1695995697.7964127-CDS-E-fasciculatus_F_contig12902:1965..20521695995697.7964127-CDS-E-fasciculatus_F_contig12902:1965..2052Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12902 1966..2052 -
1622927794.3637056-CDS-E-fasciculatus_F_contig12902:2363..24681622927794.3637056-CDS-E-fasciculatus_F_contig12902:2363..2468Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12902 2364..2468 -
1695995697.8045902-CDS-E-fasciculatus_F_contig12902:2363..24681695995697.8045902-CDS-E-fasciculatus_F_contig12902:2363..2468Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12902 2364..2468 -
1622927794.3788652-CDS-E-fasciculatus_F_contig12902:2856..31081622927794.3788652-CDS-E-fasciculatus_F_contig12902:2856..3108Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12902 2857..3108 -
1695995697.8142266-CDS-E-fasciculatus_F_contig12902:2856..31081695995697.8142266-CDS-E-fasciculatus_F_contig12902:2856..3108Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12902 2857..3108 -
1622927794.389518-CDS-E-fasciculatus_F_contig12902:3451..36191622927794.389518-CDS-E-fasciculatus_F_contig12902:3451..3619Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12902 3452..3619 -
1695995697.824127-CDS-E-fasciculatus_F_contig12902:3451..36191695995697.824127-CDS-E-fasciculatus_F_contig12902:3451..3619Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12902 3452..3619 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig12902.2197.1

>prot_E-fasciculatus_F_contig12902.2197.1 ID=prot_E-fasciculatus_F_contig12902.2197.1|Name=mRNA_E-fasciculatus_F_contig12902.2197.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=302bp
DQKAVAATTIVWKDTVTLGTEDAPKRTAALYAADAVLWGTVSEEVRETPE
QIYDYFDFFARLPKLRLVEYTPAPVRVYGQFAVEAGTYTFAWQGDDGKTV
EKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPIAPAELKPVEPEADMDTI
AQAVSEVSVADKPPAPPAAAAAASSGKGTSFFRSLFGGGGGEASGDSAKP
SDGQTFKPDTHAVDVTVALGQHGLGLVLGKEEEGSRWAVKGFRDMPDGQP
NPASAGGIEVGDTLQKLDGVTLGSYKDGMEMFKKQSGSVVITVLRQDEIT
I*
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mRNA from alignment at E-fasciculatus_F_contig12902:502..3619-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig12902.2197.1 ID=mRNA_E-fasciculatus_F_contig12902.2197.1|Name=mRNA_E-fasciculatus_F_contig12902.2197.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3118bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12902:502..3619- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GACCAAAAGGCGGTGGCGGCAACCACGATCGTGTGGAAGGACACGGTGAC TCTCGGTACCGAGGACGCTCCGAAGAGGACGGCGGCTCTCTACGCCGCGG ACGCCGTTCTTTGGGGAACGGTCTCGGAGGAGGTCCGCGAAACGCCCGAG CAGATCTACGACTACTTCGTGAGTAAACTTACTTTCCATCTGCAGATTTA CCCACATTTATATTTTTTGTTCGTGTAAGATCTTAGAATGTTTGCTGTCG GCAAACGAGCCGCGACAACTAGGTAGAGTTAGTTCCTTGTGGGTTTGTGA GTCTGACGTTCTGGCAGAGGGAATGAGAGACAGCAGGCATGCCTTCCGCA CATGAAGAATCTCATCGTCGAGCGAGAACAAAAAGAGAATCAAGCCCAGA CAAACGTTGTCGGGCATACCCCACAACTGACCAACTCTATCCTACCCTAC CCCACATTTCTTCCGCCGACTGCGACGCACATATCCGACGTCACGATAAA TGGACGACCAGGACTTCTTCGCCCGTCTCCCGAAGCTGAGGCTGGTGGAG TACACCCCGGCCCCCGTTCGCGTGTACGGCCAGTTCGCCGTCGAGGCCGG CACCTACACCTTCGCCTGGCAGGGGGACGACGGCAAGACCGTTGAGAAGA GGGCCCGGTTCAGCTTCACCTTCCGAAGGGACAAGCCCGGCAGCCCCCAG CCGTGGACGATCGTGGAGCACCACTCTTCTTCCATGCCCATCGCGCCGGC AGAGCTTAAACCGGTGAGTGCTGCTCGAGTCTTGTGGCCTGAGCTTCGGC GGGTTCAGATAATTTTTTCTTCCGTACCGTATTATCGATTCATTCCAAAC CGTATCATTGATATCATCGTTTTCTTTGTATTGGTGGCTGGTATCGCGTT GAAAATTCCAGGAAAGTTCTTCCTTTGGGGCAGCTGAACTCTGGGCATTT TCATCAAAGTGGTCTCGTGTGTTTCGGACGTCGTTCCAAACTTGCACTTT GTATCCTGACCACGCTGCTACCTTCAAGACATGCTGCGTGACACCCCCCC CCGTCCGCACCACCTCAACAAGTTATAAACGGGCACAATACAATATCTAC CCTATCTCCCCCCCCCGGAAACGCGAACACCATCGCATCCATCGCATCCA GGTGGAGCCGGAGGCAGACATGGATACCATTGCCCAAGCTGTGTCCGAAG TCTCGGTGGCGGACAAGCCCCCCGCACCGCCCGCTGCGGCGGCTGCTGCC TCCAGCGTGAGTGCAACTGTCTATCTTGGACCAACCTGTAGAGAGCCAGC CCACCGCTACAGGTGGCGAAGTTGGTGTGGGGTATGCATTGAGCGCCGCT GCTGGCCGCGTGGTCACACGTGCGAAGACACGAAGGAAGCAGCAGTCAAC CTCTCTAACCTCTCTCATCCCAAAAAGCATGCAAGAAGGAAAAAAGGAAG GAGTCAGCCTGTCCCCTCAGCCTTGCATGCCAACAACATACATGTTTCTT GGGAATATTTTTATTGTTGACGCAAAACCTCACGTTGATTTTTTTGTTTG TTGTCCGGCCGAGGCAGGGCAAGGGAACGTCGTTCTTCCGATCGCTGTTC GGCGGCGGGGGTGGTGAAGCGAGTGGCGACAGCGCGAAGCCCAGCGATGG CCAGGTGTGATGGGATTTCGTCTGTTTGTCTTTTTCCTACACTTAATATA CGTAAGAAAATACATCAAGTTGTGTTGTACGACCTTTATATAAGCCATGG GAACAGGCTCCATGCAGGGACACGGTATTTCGGCAAGGTCCCATCTTGAA TTGAGAGATATACGCTGTTCCGGGGATGGTTTCTCCCCCCCCCCCCTCCA TGTCACATGCCTTGGTGGTGTACAACACCGCCTTGGGATGATTTTCCAAT TCGTAATAACTCCACCCCCGAGGGATAGCTCAAGAGTTGTTCTCCTCCCC CTCACCATCTTGACTGCTTTTGTTGAGGGGGTGGGGATGTTGGTAATAGC ACCCGAGGACTTGGTGCAGCTGTGGGAGATTGGTTCCCAGTACAATTGTA GCAGTAGTTGGACGGACATAACTGCTCGGACAGCGACGTGCGGTAACGCT TGCTGGCTGGATCGACAACCAAGTAGAGTTGCTGGTGACATGAACAGGCC CACAGCAGCAACAAGCGACATGTCAAGCTCTGGGCTATTCCGCTACCGGC TGCACCCATGACCTAGCAGTTGCATTCATGATGCACAGGAGCCTGATATT TCTGCCTTGAGGACCTCAACGTGTTGACTCGACCCCCCGATCACATGCCT CCATTGTCAAGGCTTGTGCTACTGTATCGTGGCCGCTCTCGTCGACTTCC GTTAGACTTTGTTGGTCGTTGTCTTGTCATCAACGATAGTTAGCTGTTAC AGTTGCCGATGCTATTGGGACTAATGTGATGCCCTGTTTGCTGCTTTCGC CCCTGGATGCACGTACTCCAGACCTTCAAGCCTGACACGCACGCCGTGGA CGTGACGGTGGCTCTCGGACAACACGGTCTTGGGCTCGTCCTCGGGAAGG AAGAGGAGGGAAGCCGCTGGGCCGTGAAGGGGTTCCGCGACATGCCCGAC GGACAACCCAACCCTGCGTCGGTGAGTTTTTTTTTCTTCTTTTTTTCATC TGCGAAAATGCTGGATGGAATGAACTTGCCTGGAGCTATGACCGCGTTAT ACATATATTGTATATGGCTGAGGTTTGGAGGAGTGGACATGTCGACACAA ATGTGTTGAATCGTGACACCGGCGTGATGTCACAATAGGGGATCTGGCTG TCAAAGACGAGGGTGTGACCCCCCCCCCCCTAGGTATCAGGCTCGATGTG ACAGGTGTAATGTGTAGCAGTGGTTGCAGCGATGATCGTGATGACGGTAT GGTGGTGATGGTGGTGATGAATATGATGCTGACGTTGTCTGTATCCCGCG ATCCTTCTCTTCCCCCGCCCACAGGCGGGCGGTATCGAAGTCGGAGACAC CCTACAGAAGCTCGACGGCGTTACCCTCGGGTCGTACAAAGATGGCATGG AGATGTTCAAGAAGCAGAGCGGCTCCGTGGTTATCACGGTCCTTCGGCAA GATGAAATCACGATTTAA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12902:502..3619-

>mRNA_E-fasciculatus_F_contig12902.2197.1 ID=mRNA_E-fasciculatus_F_contig12902.2197.1|Name=mRNA_E-fasciculatus_F_contig12902.2197.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1812bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12902:502..3619- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GACCAAAAGGCGGTGGCGGCAACCACGATCGTGTGGAAGGACACGGTGAC
TCTCGGTACCGAGGACGCTCCGAAGAGGACGGCGGCTCTCTACGCCGCGG
ACGCCGTTCTTTGGGGAACGGTCTCGGAGGAGGTCCGCGAAACGCCCGAG
CAGATCTACGACTACTTCGACCAAAAGGCGGTGGCGGCAACCACGATCGT
GTGGAAGGACACGGTGACTCTCGGTACCGAGGACGCTCCGAAGAGGACGG
CGGCTCTCTACGCCGCGGACGCCGTTCTTTGGGGAACGGTCTCGGAGGAG
GTCCGCGAAACGCCCGAGCAGATCTACGACTACTTCGACTTCTTCGCCCG
TCTCCCGAAGCTGAGGCTGGTGGAGTACACCCCGGCCCCCGTTCGCGTGT
ACGGCCAGTTCGCCGTCGAGGCCGGCACCTACACCTTCGCCTGGCAGGGG
GACGACGGCAAGACCGTTGAGAAGAGGGCCCGGTTCAGCTTCACCTTCCG
AAGGGACAAGCCCGGCAGCCCCCAGCCGTGGACGATCGTGGAGCACCACT
CTTCTTCCATGCCCATCGCGCCGGCAGAGCTTAAACCGGACTTCTTCGCC
CGTCTCCCGAAGCTGAGGCTGGTGGAGTACACCCCGGCCCCCGTTCGCGT
GTACGGCCAGTTCGCCGTCGAGGCCGGCACCTACACCTTCGCCTGGCAGG
GGGACGACGGCAAGACCGTTGAGAAGAGGGCCCGGTTCAGCTTCACCTTC
CGAAGGGACAAGCCCGGCAGCCCCCAGCCGTGGACGATCGTGGAGCACCA
CTCTTCTTCCATGCCCATCGCGCCGGCAGAGCTTAAACCGGTGGAGCCGG
AGGCAGACATGGATACCATTGCCCAAGCTGTGTCCGAAGTCTCGGTGGCG
GACAAGCCCCCCGCACCGCCCGCTGCGGCGGCTGCTGCCTCCAGCGTGGA
GCCGGAGGCAGACATGGATACCATTGCCCAAGCTGTGTCCGAAGTCTCGG
TGGCGGACAAGCCCCCCGCACCGCCCGCTGCGGCGGCTGCTGCCTCCAGC
GGCAAGGGAACGTCGTTCTTCCGATCGCTGTTCGGCGGCGGGGGTGGTGA
AGCGAGTGGCGACAGCGCGAAGCCCAGCGATGGCCAGGGCAAGGGAACGT
CGTTCTTCCGATCGCTGTTCGGCGGCGGGGGTGGTGAAGCGAGTGGCGAC
AGCGCGAAGCCCAGCGATGGCCAGACCTTCAAGCCTGACACGCACGCCGT
GGACGTGACGGTGGCTCTCGGACAACACGGTCTTGGGCTCGTCCTCGGGA
AGGAAGAGGAGGGAAGCCGCTGGGCCGTGAAGGGGTTCCGCGACATGCCC
GACGGACAACCCAACCCTGCGTCGACCTTCAAGCCTGACACGCACGCCGT
GGACGTGACGGTGGCTCTCGGACAACACGGTCTTGGGCTCGTCCTCGGGA
AGGAAGAGGAGGGAAGCCGCTGGGCCGTGAAGGGGTTCCGCGACATGCCC
GACGGACAACCCAACCCTGCGTCGGCGGGCGGTATCGAAGTCGGAGACAC
CCTACAGAAGCTCGACGGCGTTACCCTCGGGTCGTACAAAGATGGCATGG
AGATGTTCAAGAAGCAGAGCGGCTCCGTGGTTATCACGGTCCTTCGGCAA
GATGAAATCACGATTTAAGCGGGCGGTATCGAAGTCGGAGACACCCTACA
GAAGCTCGACGGCGTTACCCTCGGGTCGTACAAAGATGGCATGGAGATGT
TCAAGAAGCAGAGCGGCTCCGTGGTTATCACGGTCCTTCGGCAAGATGAA
ATCACGATTTAA
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