mRNA_E-fasciculatus_F_contig1290.2190.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1290.2190.1
Unique NamemRNA_E-fasciculatus_F_contig1290.2190.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig1290.2190.1 vs. uniprot
Match: D8LAU2_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAU2_ECTSI)

HSP 1 Score: 209 bits (532), Expect = 1.350e-63
Identity = 99/171 (57.89%), Postives = 124/171 (72.51%), Query Frame = 1
Query:    1 EKARRIIGDVCAGMAFLHRMENIHGDLKSANVLLDGAGRAKIGDFGTSKWTHHTDSTAWPTFPTNPSQGHGQHISLAWSAPEVLNGKRSTYASDVYSFGVLVWEVTTTEVPWANKTCPVEIICAVLQGGRLEFAANTPAAIAELASVCWVKEAEKRPTFRELMEGFKSSGW 513
            E++RRIIGDVC+GMAFLH  + +HGDLKSANVLLDGAGRAKIGDFGTS+W  HT+ST   T+ T  S+     +SLAWSAPEVL  + STY SDVYSFG++ WEV + ++PWA+K  P ++ICAVL+G R    A     IA++   CW +E E RP F  +MEG K +GW
Sbjct:  218 EQSRRIIGDVCSGMAFLHSKDTVHGDLKSANVLLDGAGRAKIGDFGTSRWAQHTNSTGLATYTTRSSRS--TPMSLAWSAPEVLEAEGSTYESDVYSFGIVAWEVISKKMPWADKIRPRDVICAVLKGLRPVIPAGATVDIADVMKACWAEEPEARPKFGAIMEGLKLNGW 386          
BLAST of mRNA_E-fasciculatus_F_contig1290.2190.1 vs. uniprot
Match: D7G7X7_ECTSI (ATP binding / amino acid binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7X7_ECTSI)

HSP 1 Score: 213 bits (541), Expect = 8.980e-61
Identity = 101/171 (59.06%), Postives = 124/171 (72.51%), Query Frame = 1
Query:    1 EKARRIIGDVCAGMAFLHRMENIHGDLKSANVLLDGAGRAKIGDFGTSKWTHHTDSTAWPTFPTNPSQGHGQHISLAWSAPEVLNGKRSTYASDVYSFGVLVWEVTTTEVPWANKTCPVEIICAVLQGGRLEFAANTPAAIAELASVCWVKEAEKRPTFRELMEGFKSSGW 513
            EK+R+IIGD+CAGMAFLH    +HGDLKSANVLLDG GRAKIGDFGTS+W+ HT+ST   T+ T  +Q     +SLAWSAPEVL    STY SDVYSFG++VWEV + E+PWANKT P +I+ AVL G R  F  + PA I ++A  CW  E E+R TF  ++EG  + GW
Sbjct:  906 EKSRQIIGDICAGMAFLHGKNTVHGDLKSANVLLDGGGRAKIGDFGTSRWSQHTNSTGLATYTTKANQS--TQMSLAWSAPEVLESGGSTYKSDVYSFGIVVWEVLSRELPWANKTRPRDILSAVLMGIRPSFHVDAPADIVDIAKACWGGEPEERTTFSAILEGMDAKGW 1074          
BLAST of mRNA_E-fasciculatus_F_contig1290.2190.1 vs. uniprot
Match: A0A6H5KF25_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF25_9PHAE)

HSP 1 Score: 212 bits (540), Expect = 1.360e-60
Identity = 101/171 (59.06%), Postives = 124/171 (72.51%), Query Frame = 1
Query:    1 EKARRIIGDVCAGMAFLHRMENIHGDLKSANVLLDGAGRAKIGDFGTSKWTHHTDSTAWPTFPTNPSQGHGQHISLAWSAPEVLNGKRSTYASDVYSFGVLVWEVTTTEVPWANKTCPVEIICAVLQGGRLEFAANTPAAIAELASVCWVKEAEKRPTFRELMEGFKSSGW 513
            EK+R+IIGD+CAGMAFLH    +HGDLKSANVLLDG GRAKIGDFGTS+W+ HT+ST   T+ T  +Q     +SLAWSAPEVL    STY SDVYSFG++VWEV + E+PWANKT P +I+ AVL G R  F  + PA I ++A  CW  E E+R TF  ++EG  + GW
Sbjct:  931 EKSRQIIGDICAGMAFLHGKNTVHGDLKSANVLLDGGGRAKIGDFGTSRWSQHTNSTGLATYTTKANQS--TQMSLAWSAPEVLESGGSTYKSDVYSFGIVVWEVFSRELPWANKTRPRDILSAVLMGIRPSFHVDAPADIVDIAKACWGGEPEERTTFSAILEGMDAKGW 1099          
BLAST of mRNA_E-fasciculatus_F_contig1290.2190.1 vs. uniprot
Match: D8LHV1_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHV1_ECTSI)

HSP 1 Score: 210 bits (534), Expect = 8.430e-60
Identity = 104/169 (61.54%), Postives = 123/169 (72.78%), Query Frame = 1
Query:    1 EKARRIIGDVCAGMAFLHRMENIHGDLKSANVLLDGAGRAKIGDFGTSKWTHHTDSTAWPTFPTN-PSQGHGQHISLAWSAPEVLNGKRSTYASDVYSFGVLVWEVTTTEVPWANKTCPVEIICAVLQGGRLEFAANTPAAIAELASVCWVKEAEKRPTFRELMEGFKS 504
            E++RRIIGD+CAGMAFLH  + +HGDLKSANVLLDG+GRAKIGDFGTS+W+ HT ST   T+ T  PS      +SLAWSAPEVL    STYASDVYSFG++VWEV + E+PWANKT P EI+ AVL G R  F  + PA I E+A  CWV E   R TF  ++EG  S
Sbjct:  920 EQSRRIIGDICAGMAFLHEKDTVHGDLKSANVLLDGSGRAKIGDFGTSRWSQHTHSTGLATYTTTKPST----QMSLAWSAPEVLESGGSTYASDVYSFGIVVWEVVSGELPWANKTRPREILSAVLMGARPSFRHDAPADIVEIAKACWVGEPRARTTFDAVLEGMDS 1084          
BLAST of mRNA_E-fasciculatus_F_contig1290.2190.1 vs. uniprot
Match: D8LRE9_ECTSI (Transmembrane receptor kinase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRE9_ECTSI)

HSP 1 Score: 206 bits (523), Expect = 1.640e-58
Identity = 101/170 (59.41%), Postives = 122/170 (71.76%), Query Frame = 1
Query:    1 EKARRIIGDVCAGMAFLHRMENIHGDLKSANVLLDGAGRAKIGDFGTSKWTHHTDSTAWPTFPTNPSQGHGQHISLAWSAPEVLNGKRSTYASDVYSFGVLVWEVTTTEVPWANKTCPVEIICAVLQGGRLEFAANTPAAIAELASVCWVKEAEKRPTFRELMEGFKSSG 510
            E++RRIIGD+CAGMAFLH  + +HGDLKSANVLLDG+GRAKIGDFGTS+W+ HT+ST   T+ T  S G    +SLAWSAPEVL    ST ASDVYSFG++VWEV + E+PWANK+ P EI+ AVL G R  F    P  + E+A  CW  E + R TF  +MEG  S G
Sbjct:  781 EQSRRIIGDICAGMAFLHSKDTVHGDLKSANVLLDGSGRAKIGDFGTSRWSQHTNSTGLATYTTRSSPG--TQMSLAWSAPEVLESGGSTRASDVYSFGIVVWEVVSGELPWANKSRPREILSAVLMGVRPSFNDIAPTDMVEIAKACWEGEPDARTTFDAVMEGMMSKG 948          
BLAST of mRNA_E-fasciculatus_F_contig1290.2190.1 vs. uniprot
Match: A0A6H5JSI8_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI8_9PHAE)

HSP 1 Score: 201 bits (511), Expect = 5.700e-57
Identity = 94/171 (54.97%), Postives = 123/171 (71.93%), Query Frame = 1
Query:    1 EKARRIIGDVCAGMAFLHRMENIHGDLKSANVLLDGAGRAKIGDFGTSKWTHHTDSTAWPTFPTNPSQGHGQHISLAWSAPEVLNGKRSTYASDVYSFGVLVWEVTTTEVPWANKTCPVEIICAVLQGGRLEFAANTPAAIAELASVCWVKEAEKRPTFRELMEGFKSSGW 513
            E++R II D+C GMAFLH    +HGDLKSANVLLD  GRAKI DFGTS+WT   +ST   T+ T  SQ     +S+AWSAPEVL+ ++S+Y SDVYSFG++VWEV + E+PWANKT P E++ AVL+G R  F    PA I ++A  CW  E ++R TFR +++G K++GW
Sbjct:  728 EQSRLIIRDICTGMAFLHSKNTVHGDLKSANVLLDDIGRAKIADFGTSRWTQTINSTGLTTYTTKSSQT--TQMSIAWSAPEVLDSEKSSYESDVYSFGIVVWEVLSRELPWANKTRPSEVLTAVLRGIRPSFHVGAPADIVDIAKACWCGEPKERTTFRAILDGMKANGW 896          
BLAST of mRNA_E-fasciculatus_F_contig1290.2190.1 vs. uniprot
Match: A0A6H5KY76_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY76_9PHAE)

HSP 1 Score: 197 bits (502), Expect = 2.110e-55
Identity = 98/172 (56.98%), Postives = 119/172 (69.19%), Query Frame = 1
Query:    1 EKARRIIGDVCAGMAFLHRMENIHGDLKSANVLLDGAGRAKIGDFGTSKWTHHTDSTAWPTFPTNPSQGHGQHISLAWSAPEVLNGKRSTYASDVYSFGVLVWEVTTTEVPWANKTCPVEI-ICAVLQGGRLEFAANTPAAIAELASVCWVKEAEKRPTFRELMEGFKSSGW 513
            E+ RRIIGD+CAGM FLH  E +HGDLKSANVLLDGAGRAKIGDFGTS+W++HT+ST   T+      G    +SLAWSAPEVL    STYASDVYSFG++ WEV + E+PWA+   P E+ I  VL   R E  A+ PA IA +   CW  + E RPT   +ME  +S+GW
Sbjct: 1040 EQCRRIIGDICAGMHFLHSKETVHGDLKSANVLLDGAGRAKIGDFGTSRWSYHTNSTGLATYT---KAGQNTQMSLAWSAPEVLGASGSTYASDVYSFGIVAWEVLSRELPWASVVHPREVYIRVVLNELRPEIPADAPADIATIMRACWAGDPEARPTSSAIMERIESNGW 1208          
BLAST of mRNA_E-fasciculatus_F_contig1290.2190.1 vs. uniprot
Match: D7G7F2_ECTSI (Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs/ leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F2_ECTSI)

HSP 1 Score: 197 bits (501), Expect = 2.810e-55
Identity = 93/171 (54.39%), Postives = 122/171 (71.35%), Query Frame = 1
Query:    1 EKARRIIGDVCAGMAFLHRMENIHGDLKSANVLLDGAGRAKIGDFGTSKWTHHTDSTAWPTFPTNPSQGHGQHISLAWSAPEVLNGKRSTYASDVYSFGVLVWEVTTTEVPWANKTCPVEIICAVLQGGRLEFAANTPAAIAELASVCWVKEAEKRPTFRELMEGFKSSGW 513
            +++RRII D+C GMAFLH    +HGDLKSANVLLDG GRAKI DFGTS+WT  T+ST   T+ T  SQ     +S+AWSAPEVL  + S+Y SDVYSFG++VWEV + EVPWA KT   +I+ AVL+G R  F  + PA + ++A+ CW  E ++R TFR +++G K+  W
Sbjct:  990 QQSRRIIRDICTGMAFLHGKNTVHGDLKSANVLLDGDGRAKIADFGTSRWTQTTNSTGLATYTTRSSQT--TQMSIAWSAPEVLESEGSSYESDVYSFGIVVWEVISREVPWAKKTRSRDILTAVLRGVRPSFHVDAPADVVDIANACWCGEPKERTTFRAILQGIKAKDW 1158          
BLAST of mRNA_E-fasciculatus_F_contig1290.2190.1 vs. uniprot
Match: D7FL57_ECTSI (Hypothetical leucine rich repeat kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL57_ECTSI)

HSP 1 Score: 192 bits (489), Expect = 9.050e-54
Identity = 93/171 (54.39%), Postives = 119/171 (69.59%), Query Frame = 1
Query:    1 EKARRIIGDVCAGMAFLHRMENIHGDLKSANVLLDGAGRAKIGDFGTSKWTHHTDSTAWPTFPTNPSQGHGQHISLAWSAPEVLNGKRSTYASDVYSFGVLVWEVTTTEVPWANKTCPVEIICAVLQGGRLEFAANTPAAIAELASVCWVKEAEKRPTFRELMEGFKSSGW 513
            +++R+II D+C GMAFLH    +HGDLKSANVLLDG GRAKI DFGTS+WT  T+ST   T+ T  SQ     +S+AWSAPEVL  + S+Y SDVYSFG++VWEV   E+PWA KT P +I+ AVL+G R  F  + PA I  +A  CW  E ++R TFR ++ G K+  W
Sbjct:  812 QQSRQIIRDICTGMAFLHGKNTVHGDLKSANVLLDGDGRAKIADFGTSRWTQTTNSTGLATYTTRSSQT--TLMSIAWSAPEVLESEGSSYESDVYSFGIVVWEVICRELPWAKKTRPRDILTAVLRGVRPSFHVDAPADIVYIAKACWCGEPKERTTFRAILMGIKAKDW 980          
BLAST of mRNA_E-fasciculatus_F_contig1290.2190.1 vs. uniprot
Match: D7FRQ5_ECTSI (Similar to CG1848-PA, isoform A/ leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRQ5_ECTSI)

HSP 1 Score: 180 bits (456), Expect = 2.640e-49
Identity = 92/164 (56.10%), Postives = 113/164 (68.90%), Query Frame = 1
Query:    1 EKARRIIGDVCAGMAFLHRMENIHGDLKSANVLLDGAGRAKIGDFGTSKWTHHTD-STAWPTFPTNPSQGHGQHISLAWSAPEVLNGKRSTYASDVYSFGVLVWEVTTTEVPWANKTCPVEIIC-AVLQGGRLEFAANTPAAIAELASVCWVKEAEKRPTFREL 486
            +K R+II DVCAGMAFLH    +HGDLKSANVLLDG GRAKIGDFGTS+W  +T+ ST   T+ TNP  G   HISLAW+APEVL  K ++ ASDVYSFG++ WEV T + PWA++T P +I    V++  R    A+ P  IAE+   CW +E   RPTF  L
Sbjct:  766 DKCRQIIHDVCAGMAFLHSKATVHGDLKSANVLLDGRGRAKIGDFGTSRWAQNTERSTGLATYTTNP--GPSTHISLAWTAPEVLEAKETSKASDVYSFGMVAWEVLTRQTPWADQTRPRDIFLRVVMREERPAIPADAPVDIAEMVRSCWAQEPLDRPTFPVL 927          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1290.2190.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LAU2_ECTSI1.350e-6357.89Protein kinase domain-containing protein n=1 Tax=E... [more]
D7G7X7_ECTSI8.980e-6159.06ATP binding / amino acid binding / protein kinase/... [more]
A0A6H5KF25_9PHAE1.360e-6059.06Protein kinase domain-containing protein n=1 Tax=E... [more]
D8LHV1_ECTSI8.430e-6061.54Protein kinase domain-containing protein n=1 Tax=E... [more]
D8LRE9_ECTSI1.640e-5859.41Transmembrane receptor kinase n=2 Tax=Ectocarpus s... [more]
A0A6H5JSI8_9PHAE5.700e-5754.97Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A6H5KY76_9PHAE2.110e-5556.98Protein kinase domain-containing protein n=1 Tax=E... [more]
D7G7F2_ECTSI2.810e-5554.39Tyrosine kinase specific for activated (GTP-bound)... [more]
D7FL57_ECTSI9.050e-5454.39Hypothetical leucine rich repeat kinase n=1 Tax=Ec... [more]
D7FRQ5_ECTSI2.640e-4956.10Similar to CG1848-PA, isoform A/ leucine rich repe... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1290contigE-fasciculatus_F_contig1290:2939..4245 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score190.3
Seed ortholog evalue7.1e-46
Seed eggNOG ortholog2880.D7G7X7
Preferred nameRIPK4
KEGG koko:K02861,ko:K08846,ko:K08847,ko:K08848,ko:K14767,ko:K16175,ko:K16289
KEGG Pathwayko04064,ko04210,ko04217,ko04390,ko04391,ko04530,ko04620,ko04621,ko04622,ko04623,ko04668,ko04722,ko05131,ko05152,ko05160,ko05165,ko05169,ko05203,map04064,map04210,map04217,map04390,map04391,map04530,map04620,map04621,map04622,map04623,map04668,map04722,map05131,map05152,map05160,map05165,map05169,map05203
GOsGO:0002009,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006355,GO:0008150,GO:0009653,GO:0009888,GO:0009889,GO:0010468,GO:0010556,GO:0016020,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0032502,GO:0044093,GO:0044424,GO:0044464,GO:0048518,GO:0048729,GO:0048856,GO:0050789,GO:0050794,GO:0051090,GO:0051091,GO:0051092,GO:0051171,GO:0051252,GO:0060255,GO:0060429,GO:0065007,GO:0065009,GO:0080090,GO:1903506,GO:2000112,GO:2001141
EggNOG free text desc.regulation of response to stimulus
EggNOG OGsCOG0515@1,COG4886@1,KOG0192@2759,KOG0619@2759
EC2.7.11.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko03009
Hectar predicted targeting categoryother localisation
Exons3
Model size524
Cds size483
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1290.2190.1prot_E-fasciculatus_F_contig1290.2190.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1290 2941..4206 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927793.7122438-UTR-E-fasciculatus_F_contig1290:2938..29401622927793.7122438-UTR-E-fasciculatus_F_contig1290:2938..2940Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1290 2939..2940 -
1695995697.5101066-UTR-E-fasciculatus_F_contig1290:2938..29401695995697.5101066-UTR-E-fasciculatus_F_contig1290:2938..2940Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1290 2939..2940 -
1622927793.7508566-UTR-E-fasciculatus_F_contig1290:4206..42451622927793.7508566-UTR-E-fasciculatus_F_contig1290:4206..4245Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1290 4207..4245 -
1695995697.5518863-UTR-E-fasciculatus_F_contig1290:4206..42451695995697.5518863-UTR-E-fasciculatus_F_contig1290:4206..4245Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1290 4207..4245 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927793.722104-CDS-E-fasciculatus_F_contig1290:2940..32161622927793.722104-CDS-E-fasciculatus_F_contig1290:2940..3216Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1290 2941..3216 -
1695995697.5220668-CDS-E-fasciculatus_F_contig1290:2940..32161695995697.5220668-CDS-E-fasciculatus_F_contig1290:2940..3216Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1290 2941..3216 -
1622927793.731883-CDS-E-fasciculatus_F_contig1290:3795..39181622927793.731883-CDS-E-fasciculatus_F_contig1290:3795..3918Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1290 3796..3918 -
1695995697.531242-CDS-E-fasciculatus_F_contig1290:3795..39181695995697.531242-CDS-E-fasciculatus_F_contig1290:3795..3918Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1290 3796..3918 -
1622927793.7419918-CDS-E-fasciculatus_F_contig1290:4122..42061622927793.7419918-CDS-E-fasciculatus_F_contig1290:4122..4206Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1290 4123..4206 -
1695995697.543429-CDS-E-fasciculatus_F_contig1290:4122..42061695995697.543429-CDS-E-fasciculatus_F_contig1290:4122..4206Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1290 4123..4206 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1290.2190.1

>prot_E-fasciculatus_F_contig1290.2190.1 ID=prot_E-fasciculatus_F_contig1290.2190.1|Name=mRNA_E-fasciculatus_F_contig1290.2190.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=161bp
MAFLHRMENIHGDLKSANVLLDGAGRAKIGDFGTSKWTHHTDSTAWPTFP
TNPSQGHGQHISLAWSAPEVLNGKRSTYASDVYSFGVLVWEVTTTEVPWA
NKTCPVEIICAVLQGGRLEFAANTPAAIAELASVCWVKEAEKRPTFRELM
EGFKSSGWIG*
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mRNA from alignment at E-fasciculatus_F_contig1290:2939..4245-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1290.2190.1 ID=mRNA_E-fasciculatus_F_contig1290.2190.1|Name=mRNA_E-fasciculatus_F_contig1290.2190.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1307bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1290:2939..4245- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GAAAAGGCTCGGCGAATCATTGGGGACGTCTGCGCCGGCATGGCGTTTCT CCATAGAATGGAGAACATCCACGGTGATCTGAAGTCGGCAAACGTGCTCT TAGATGGAGCCGGCAGGGCGAAGGTAGGCCTTGGCCCTAACACCCAATGT TTGGCATGTGATCCCTCCGAAGAGTCGCTCTCGAAGAGGACAGCTAGCCG GCAACTTGCCGGGTTCTTGCCGCGCGTTTTGAGTTGATCATAGCCGCTGT CCAGGCACGTCGAACACACGTCTTCAAGCAGCGCACATTTGCGTATCTAA CTATACCGTTTGGACCGTGCGTGACAGATTGGGGACTTCGGCACATCCAA ATGGACCCACCACACCGACTCAACCGCCTGGCCAACGTTTCCGACAAATC CCAGCCAAGGTCACGGTCAACACATAAGCTTGGCGTGGAGCGCTCCTGAG GTATGTGCGGCACGGAAAAGGTACAACCTAGGTAGATTCCAGGTGTAGCC TCCTCTCATGGACGAAAGGCGATCGGGGCAGTCTCCGGAACAATTCAACG CTGGGTACGATCGACAGTGCTCTCGGGCGTACTCCTATAGCTCTGGTACC GATGGCGTAGTCGTGCAAGCAAACAGATAGAGGTAGGTTTTGCTTTTCCC GTCTGCACGATGCGAGATGGCGGATACGGCAGGCCACGACATGTTCCTTC AAAGTTCTTCTGGTCCCCACACAAGCGCGAGCGCTCGCTATCCTACGCCG AGGCGCCGAGGTGGGGAAACGCCGCGTGAGACTGCCAAAAGCTGCGATTG TACTGTCTTGCGCCACGATGTATACCATTGTATCGGACATGGAGGTTTGT ACATTGGTCACGAGTGGAAAAGAGTGGACGGAATCAAACTCCCCGTCGGT CCATGAAATCAACGCCGGGCGTGATGCCCCGCGCTCCGTCTTAGGTCGCC AATCGTGGTCGTTGGTTTGAACATCTCTCCTGTATTCATCGTTGTTCCTT CTGCATCGGTTTGACATTCACGGGCGCAGGTGCTAAATGGGAAACGTAGC ACCTACGCCAGCGACGTATACAGCTTCGGTGTGCTGGTTTGGGAGGTGAC CACTACGGAGGTGCCTTGGGCGAACAAGACATGCCCTGTGGAAATCATAT GCGCTGTGCTGCAGGGAGGTCGTCTAGAGTTTGCGGCCAACACTCCTGCG GCAATAGCAGAACTTGCGAGCGTGTGCTGGGTCAAGGAAGCCGAGAAGCG CCCTACATTTCGCGAACTAATGGAGGGCTTCAAGTCAAGCGGCTGGATAG GGTAGCC
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1290:2939..4245-

>mRNA_E-fasciculatus_F_contig1290.2190.1 ID=mRNA_E-fasciculatus_F_contig1290.2190.1|Name=mRNA_E-fasciculatus_F_contig1290.2190.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=966bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1290:2939..4245- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGCGTTTCTCCATAGAATGGAGAACATCCACGGTGATCTGAAGTCGGC
AAACGTGCTCTTAGATGGAGCCGGCAGGGCGAAGATGGCGTTTCTCCATA
GAATGGAGAACATCCACGGTGATCTGAAGTCGGCAAACGTGCTCTTAGAT
GGAGCCGGCAGGGCGAAGATTGGGGACTTCGGCACATCCAAATGGACCCA
CCACACCGACTCAACCGCCTGGCCAACGTTTCCGACAAATCCCAGCCAAG
GTCACGGTCAACACATAAGCTTGGCGTGGAGCGCTCCTGAGATTGGGGAC
TTCGGCACATCCAAATGGACCCACCACACCGACTCAACCGCCTGGCCAAC
GTTTCCGACAAATCCCAGCCAAGGTCACGGTCAACACATAAGCTTGGCGT
GGAGCGCTCCTGAGGTGCTAAATGGGAAACGTAGCACCTACGCCAGCGAC
GTATACAGCTTCGGTGTGCTGGTTTGGGAGGTGACCACTACGGAGGTGCC
TTGGGCGAACAAGACATGCCCTGTGGAAATCATATGCGCTGTGCTGCAGG
GAGGTCGTCTAGAGTTTGCGGCCAACACTCCTGCGGCAATAGCAGAACTT
GCGAGCGTGTGCTGGGTCAAGGAAGCCGAGAAGCGCCCTACATTTCGCGA
ACTAATGGAGGGCTTCAAGTCAAGCGGCTGGATAGGGTAGGTGCTAAATG
GGAAACGTAGCACCTACGCCAGCGACGTATACAGCTTCGGTGTGCTGGTT
TGGGAGGTGACCACTACGGAGGTGCCTTGGGCGAACAAGACATGCCCTGT
GGAAATCATATGCGCTGTGCTGCAGGGAGGTCGTCTAGAGTTTGCGGCCA
ACACTCCTGCGGCAATAGCAGAACTTGCGAGCGTGTGCTGGGTCAAGGAA
GCCGAGAAGCGCCCTACATTTCGCGAACTAATGGAGGGCTTCAAGTCAAG
CGGCTGGATAGGGTAG
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